RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 MYOM3Q5VTT5 1437 aa21.61■■□□□ 1.05
PDZRN3-201ENST00000263666 NOP58Q9Y2X3 529 aaKnown RBP21.61■■□□□ 1.05
PDZRN3-201ENST00000263666 PLPPR3Q6T4P5 718 aa21.6■■□□□ 1.05
PDZRN3-201ENST00000263666 KIF7Q2M1P5 1343 aa21.6■■□□□ 1.05
PDZRN3-201ENST00000263666 LAMC3Q9Y6N6 1575 aa21.58■■□□□ 1.05
PDZRN3-201ENST00000263666 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
PDZRN3-201ENST00000263666 MSH5O43196 834 aa21.57■■□□□ 1.04
PDZRN3-201ENST00000263666 CANXP27824 592 aaKnown RBP21.57■■□□□ 1.04
PDZRN3-201ENST00000263666 RTN4Q9NQC3 1192 aaKnown RBP21.57■■□□□ 1.04
PDZRN3-201ENST00000263666 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
PDZRN3-201ENST00000263666 ST20-MTHFSA0A0A6YYL1 179 aa21.56■■□□□ 1.04
PDZRN3-201ENST00000263666 DEKP35659 375 aaKnown RBP21.56■■□□□ 1.04
PDZRN3-201ENST00000263666 GRIN2BQ13224 1484 aa21.55■■□□□ 1.04
PDZRN3-201ENST00000263666 PTPRKQ15262 1439 aa21.55■■□□□ 1.04
PDZRN3-201ENST00000263666 HNRNPMP52272 730 aaKnown RBP eCLIP21.55■■□□□ 1.04
PDZRN3-201ENST00000263666 NUP155O75694 1391 aa21.55■■□□□ 1.04
PDZRN3-201ENST00000263666 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
PDZRN3-201ENST00000263666 ESF1Q9H501 851 aaKnown RBP21.54■■□□□ 1.04
PDZRN3-201ENST00000263666 NAIPQ13075 1403 aa21.53■■□□□ 1.04
PDZRN3-201ENST00000263666 FYCO1Q9BQS8 1478 aa21.51■■□□□ 1.03
PDZRN3-201ENST00000263666 PLIN1O60240 522 aa21.5■■□□□ 1.03
PDZRN3-201ENST00000263666 WDR43Q15061 677 aaKnown RBP eCLIP21.5■■□□□ 1.03
PDZRN3-201ENST00000263666 NUDCQ9Y266 331 aa21.5■■□□□ 1.03
PDZRN3-201ENST00000263666 URB2Q14146 1524 aaKnown RBP21.49■■□□□ 1.03
PDZRN3-201ENST00000263666 HFM1A2PYH4 1435 aa21.48■■□□□ 1.03
PDZRN3-201ENST00000263666 IFT140Q96RY7 1462 aa21.48■■□□□ 1.03
PDZRN3-201ENST00000263666 ARXQ96QS3 562 aa21.48■■□□□ 1.03
PDZRN3-201ENST00000263666 PTPRGP23470 1445 aa21.47■■□□□ 1.03
PDZRN3-201ENST00000263666 ZBED9Q6R2W3 1325 aa21.47■■□□□ 1.03
PDZRN3-201ENST00000263666 RGS3P49796 1198 aa21.46■■□□□ 1.03
PDZRN3-201ENST00000263666 NEUROD2Q15784 382 aa21.46■■□□□ 1.03
PDZRN3-201ENST00000263666 USP47Q96K76 1375 aa21.45■■□□□ 1.02
PDZRN3-201ENST00000263666 AKNAQ7Z591 1439 aa21.44■■□□□ 1.02
PDZRN3-201ENST00000263666 CNTLNQ9NXG0 1405 aa21.44■■□□□ 1.02
PDZRN3-201ENST00000263666 STAG3Q9UJ98 1225 aa21.44■■□□□ 1.02
PDZRN3-201ENST00000263666 ABCA10Q8WWZ4 1543 aa21.44■■□□□ 1.02
PDZRN3-201ENST00000263666 TNNT2P45379 298 aaPredicted RBP21.44■■□□□ 1.02
PDZRN3-201ENST00000263666 EXOC6Q8TAG9 804 aa21.44■■□□□ 1.02
PDZRN3-201ENST00000263666 OSCARQ8IYS5 282 aa21.43■■□□□ 1.02
PDZRN3-201ENST00000263666 RCAN3Q9UKA8 241 aa21.41■■□□□ 1.02
PDZRN3-201ENST00000263666 PAK3O75914 559 aaPredicted RBP21.4■■□□□ 1.02
PDZRN3-201ENST00000263666 NEFMP07197 916 aa21.39■■□□□ 1.02
PDZRN3-201ENST00000263666 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
PDZRN3-201ENST00000263666 ROCK2O75116 1388 aaKnown RBP21.39■■□□□ 1.01
PDZRN3-201ENST00000263666 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.01
PDZRN3-201ENST00000263666 KNSTRNQ9Y448 316 aa21.36■■□□□ 1.01
PDZRN3-201ENST00000263666 CYB5RLQ6IPT4 315 aa21.35■■□□□ 1.01
PDZRN3-201ENST00000263666 FANCIQ9NVI1 1328 aa21.35■■□□□ 1.01
PDZRN3-201ENST00000263666 EFCAB2Q5VUJ9 269 aa21.34■■□□□ 1.01
PDZRN3-201ENST00000263666 SKAP1Q86WV1 359 aa21.34■■□□□ 1.01
PDZRN3-201ENST00000263666 ERICH6BQ5W0A0 696 aa21.34■■□□□ 1.01
PDZRN3-201ENST00000263666 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1.01
PDZRN3-201ENST00000263666 CDCA7LQ96GN5 454 aa21.33■■□□□ 1.01
PDZRN3-201ENST00000263666 SLC4A3P48751 1232 aa21.33■■□□□ 1
PDZRN3-201ENST00000263666 ANKRD30AQ9BXX3 1397 aa21.33■■□□□ 1
PDZRN3-201ENST00000263666 CCDC146Q8IYE0 955 aa21.29■■□□□ 1
PDZRN3-201ENST00000263666 IPO9Q96P70 1041 aaKnown RBP21.28■■□□□ 1
PDZRN3-201ENST00000263666 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
PDZRN3-201ENST00000263666 PRDM2Q13029 1718 aa21.27■■□□□ 1
PDZRN3-201ENST00000263666 PANK3Q9H999 370 aa21.27■■□□□ 1
PDZRN3-201ENST00000263666 KTN1Q86UP2 1357 aaKnown RBP21.27■■□□□ 1
PDZRN3-201ENST00000263666 MAP3K1Q13233 1512 aa21.27■■□□□ 1
PDZRN3-201ENST00000263666 EIF5BO60841 1220 aaKnown RBP21.27■□□□□ 0.99
PDZRN3-201ENST00000263666 NBPF1Q3BBV0 1214 aa21.27■□□□□ 0.99
PDZRN3-201ENST00000263666 PRG4Q92954 1404 aaPredicted RBP21.27■□□□□ 0.99
PDZRN3-201ENST00000263666 FRAT1Q92837 279 aaPredicted RBP21.26■□□□□ 0.99
PDZRN3-201ENST00000263666 TRHP20396 242 aaPredicted RBP21.26■□□□□ 0.99
PDZRN3-201ENST00000263666 ARID4BQ4LE39 1312 aaPredicted RBP21.26■□□□□ 0.99
PDZRN3-201ENST00000263666 PTPN23Q9H3S7 1636 aa21.24■□□□□ 0.99
PDZRN3-201ENST00000263666 TMF1P82094 1093 aa21.24■□□□□ 0.99
PDZRN3-201ENST00000263666 NLRP13Q86W25 1043 aa21.24■□□□□ 0.99
PDZRN3-201ENST00000263666 RRP1P56182 461 aaKnown RBP21.24■□□□□ 0.99
PDZRN3-201ENST00000263666 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.22■□□□□ 0.99
PDZRN3-201ENST00000263666 GGT6Q6P531 493 aa21.22■□□□□ 0.99
PDZRN3-201ENST00000263666 MYBBP1AQ9BQG0 1328 aaKnown RBP21.22■□□□□ 0.99
PDZRN3-201ENST00000263666 RALBP1Q15311 655 aa21.21■□□□□ 0.99
PDZRN3-201ENST00000263666 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.21■□□□□ 0.99
PDZRN3-201ENST00000263666 CRBNQ96SW2 442 aa21.21■□□□□ 0.99
PDZRN3-201ENST00000263666 PNISRQ8TF01 805 aaKnown RBP21.2■□□□□ 0.98
PDZRN3-201ENST00000263666 MLECQ14165 292 aa21.19■□□□□ 0.98
PDZRN3-201ENST00000263666 PDE4AP27815 886 aa21.19■□□□□ 0.98
PDZRN3-201ENST00000263666 KIF15Q9NS87 1388 aa21.19■□□□□ 0.98
PDZRN3-201ENST00000263666 EPRSP07814 1512 aaKnown RBP21.18■□□□□ 0.98
PDZRN3-201ENST00000263666 ANKRD30BQ9BXX2 1392 aa21.18■□□□□ 0.98
PDZRN3-201ENST00000263666 EHBP1L1Q8N3D4 1523 aa21.18■□□□□ 0.98
PDZRN3-201ENST00000263666 SUPT6HQ7KZ85 1726 aaKnown RBP21.16■□□□□ 0.98
PDZRN3-201ENST00000263666 SAFB2Q14151 953 aaKnown RBP eCLIP21.16■□□□□ 0.98
PDZRN3-201ENST00000263666 DAPK1P53355 1430 aa21.15■□□□□ 0.98
PDZRN3-201ENST00000263666 ANKRD50Q9ULJ7 1429 aa21.15■□□□□ 0.98
PDZRN3-201ENST00000263666 KIAA0586Q9BVV6 1533 aa21.14■□□□□ 0.97
PDZRN3-201ENST00000263666 SPAG9O60271 1321 aaKnown RBP21.12■□□□□ 0.97
PDZRN3-201ENST00000263666 KIF3BO15066 747 aa21.12■□□□□ 0.97
PDZRN3-201ENST00000263666 SPRYD3Q8NCJ5 442 aa21.11■□□□□ 0.97
PDZRN3-201ENST00000263666 TCERG1O14776 1098 aaKnown RBP21.11■□□□□ 0.97
PDZRN3-201ENST00000263666 NCOA1Q15788 1441 aa21.1■□□□□ 0.97
PDZRN3-201ENST00000263666 ABCC5O15440 1437 aa21.1■□□□□ 0.97
PDZRN3-201ENST00000263666 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
PDZRN3-201ENST00000263666 RRP7AQ9Y3A4 280 aaKnown RBP21.09■□□□□ 0.97
PDZRN3-201ENST00000263666 SYNJ2O15056 1496 aa21.08■□□□□ 0.97
PDZRN3-201ENST00000263666 RSPH4AQ5TD94 716 aa21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms