RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 GOLGA6L3A6NEY3 463 aa15.33■□□□□ 0.04
SMG6-201ENST00000263073 FOXD4L5Q5VV16 416 aaPredicted RBP15.33■□□□□ 0.04
SMG6-201ENST00000263073 FOXD4L4Q8WXT5 416 aaPredicted RBP15.33■□□□□ 0.04
SMG6-201ENST00000263073 TMF1P82094 1093 aa15.33■□□□□ 0.04
SMG6-201ENST00000263073 ITPRIPQ8IWB1 547 aa15.33■□□□□ 0.04
SMG6-201ENST00000263073 KANK4Q5T7N3 995 aaPredicted RBP15.32■□□□□ 0.04
SMG6-201ENST00000263073 WRNQ14191 1432 aaPredicted RBP eCLIP15.32■□□□□ 0.041e-6■■■■■ 58.5
SMG6-201ENST00000263073 MORC1Q86VD1 984 aa15.31■□□□□ 0.04
SMG6-201ENST00000263073 BAZ1AQ9NRL2 1556 aaPredicted RBP15.31■□□□□ 0.04
SMG6-201ENST00000263073 NCBP3Q53F19 620 aaKnown RBP15.3■□□□□ 0.04
SMG6-201ENST00000263073 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
SMG6-201ENST00000263073 CLUAP1Q96AJ1 413 aa15.3■□□□□ 0.04
SMG6-201ENST00000263073 GBP4Q96PP9 640 aa15.29■□□□□ 0.04
SMG6-201ENST00000263073 TCERG1O14776 1098 aaKnown RBP15.29■□□□□ 0.04
SMG6-201ENST00000263073 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
SMG6-201ENST00000263073 NRDCO43847 1150 aa15.28■□□□□ 0.04
SMG6-201ENST00000263073 TIMELESSQ9UNS1 1208 aa15.28■□□□□ 0.04
SMG6-201ENST00000263073 MS4A1P11836 297 aa15.28■□□□□ 0.04
SMG6-201ENST00000263073 SOGA1O94964 1423 aa15.28■□□□□ 0.04
SMG6-201ENST00000263073 MCCP23508 829 aa15.27■□□□□ 0.04
SMG6-201ENST00000263073 SRPK2P78362 688 aaKnown RBP15.27■□□□□ 0.03
SMG6-201ENST00000263073 KIAA2012Q0VF49 1180 aa15.26■□□□□ 0.03
SMG6-201ENST00000263073 PLIN1O60240 522 aa15.26■□□□□ 0.03
SMG6-201ENST00000263073 EEA1Q15075 1411 aa15.25■□□□□ 0.03
SMG6-201ENST00000263073 VSIG10Q8N0Z9 540 aa15.25■□□□□ 0.03
SMG6-201ENST00000263073 KTN1Q86UP2 1357 aaKnown RBP15.24■□□□□ 0.03
SMG6-201ENST00000263073 STK26Q9P289 416 aa15.24■□□□□ 0.03
SMG6-201ENST00000263073 SETD5Q9C0A6 1442 aa15.24■□□□□ 0.03
SMG6-201ENST00000263073 CLSTN1O94985 981 aa15.24■□□□□ 0.03
SMG6-201ENST00000263073 CHMP4BQ9H444 224 aaKnown RBP15.23■□□□□ 0.03
SMG6-201ENST00000263073 NPHP1O15259 732 aa15.23■□□□□ 0.03
SMG6-201ENST00000263073 FOXD4L6Q3SYB3 417 aaPredicted RBP15.23■□□□□ 0.03
SMG6-201ENST00000263073 FOXD4L3Q6VB84 417 aaPredicted RBP15.23■□□□□ 0.03
SMG6-201ENST00000263073 HSP90AA2PQ14568 343 aaPredicted RBP15.22■□□□□ 0.03
SMG6-201ENST00000263073 GNL2Q13823 731 aaKnown RBP15.22■□□□□ 0.03
SMG6-201ENST00000263073 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.03
SMG6-201ENST00000263073 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMG6-201ENST00000263073 RAB3GAP2Q9H2M9 1393 aa15.21■□□□□ 0.03
SMG6-201ENST00000263073 PKD2Q13563 968 aa15.21■□□□□ 0.02
SMG6-201ENST00000263073 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
SMG6-201ENST00000263073 RWDD1Q9H446 243 aaPredicted RBP15.2■□□□□ 0.02
SMG6-201ENST00000263073 TNNT3P45378 269 aaPredicted RBP15.2■□□□□ 0.02
SMG6-201ENST00000263073 KIF27Q86VH2 1401 aa15.19■□□□□ 0.02
SMG6-201ENST00000263073 HSP90B1P14625 803 aaKnown RBP15.19■□□□□ 0.02
SMG6-201ENST00000263073 PDE4CQ08493 712 aa15.18■□□□□ 0.02
SMG6-201ENST00000263073 ISY1Q9ULR0 285 aaKnown RBP15.18■□□□□ 0.02
SMG6-201ENST00000263073 KIAA1211Q6ZU35 1233 aa15.18■□□□□ 0.02
SMG6-201ENST00000263073 TRIM6-TRIM34B2RNG4 842 aa15.17■□□□□ 0.02
SMG6-201ENST00000263073 CALD1Q05682 793 aaKnown RBP15.16■□□□□ 0.02
SMG6-201ENST00000263073 EXOC6Q8TAG9 804 aa15.16■□□□□ 0.02
SMG6-201ENST00000263073 CECR2Q9BXF3 1484 aa15.16■□□□□ 0.02
SMG6-201ENST00000263073 SMC4Q9NTJ3 1288 aa15.16■□□□□ 0.02
SMG6-201ENST00000263073 ROCK2O75116 1388 aaKnown RBP15.16■□□□□ 0.02
SMG6-201ENST00000263073 PDE4AP27815 886 aa15.16■□□□□ 0.02
SMG6-201ENST00000263073 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
SMG6-201ENST00000263073 EIF4G1Q04637 1599 aaKnown RBP15.15■□□□□ 0.02
SMG6-201ENST00000263073 GSE1Q14687 1217 aa15.15■□□□□ 0.02
SMG6-201ENST00000263073 BCL2L13Q9BXK5 485 aa15.15■□□□□ 0.02
SMG6-201ENST00000263073 CREBRFQ8IUR6 639 aa15.15■□□□□ 0.02
SMG6-201ENST00000263073 MLECQ14165 292 aa15.14■□□□□ 0.01
SMG6-201ENST00000263073 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
SMG6-201ENST00000263073 ZNF330Q9Y3S2 320 aaPredicted RBP15.13■□□□□ 0.01
SMG6-201ENST00000263073 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
SMG6-201ENST00000263073 IPO8O15397 1037 aaKnown RBP15.13■□□□□ 0.01
SMG6-201ENST00000263073 MPHOSPH9Q99550 1183 aa15.13■□□□□ 0.01
SMG6-201ENST00000263073 ANO8Q9HCE9 1232 aaPredicted RBP15.13■□□□□ 0.01
SMG6-201ENST00000263073 SLC4A10Q6U841 1118 aa15.12■□□□□ 0.01
SMG6-201ENST00000263073 PMFBP1Q8TBY8 1022 aa15.12■□□□□ 0.01
SMG6-201ENST00000263073 BCL11BQ9C0K0 894 aaPredicted RBP15.12■□□□□ 0.01
SMG6-201ENST00000263073 NUTM2DQ5VT03 806 aaPredicted RBP15.11■□□□□ 0.01
SMG6-201ENST00000263073 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.1■□□□□ 0.01
SMG6-201ENST00000263073 SYAP1Q96A49 352 aaPredicted RBP15.1■□□□□ 0.01
SMG6-201ENST00000263073 CRBNQ96SW2 442 aa15.1■□□□□ 0.01
SMG6-201ENST00000263073 NOC3LQ8WTT2 800 aaKnown RBP15.1■□□□□ 0.01
SMG6-201ENST00000263073 RALBP1Q15311 655 aa15.1■□□□□ 0.01
SMG6-201ENST00000263073 ABCC8Q09428 1581 aa15.09■□□□□ 0.01
SMG6-201ENST00000263073 PTMSP20962 102 aa15.09■□□□□ 0.01
SMG6-201ENST00000263073 L3MBTL2Q969R5 705 aa15.09■□□□□ 0.01
SMG6-201ENST00000263073 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
SMG6-201ENST00000263073 RSPH6AQ9H0K4 717 aa15.09■□□□□ 0.01
SMG6-201ENST00000263073 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0.01
SMG6-201ENST00000263073 CENPJQ9HC77 1338 aaPredicted RBP15.07■□□□□ 0
SMG6-201ENST00000263073 CCDC9Q9Y3X0 531 aaKnown RBP15.07■□□□□ 0
SMG6-201ENST00000263073 DDX49Q9Y6V7 483 aaKnown RBP15.06■□□□□ 0
SMG6-201ENST00000263073 CHMP3Q9Y3E7 222 aa15.06■□□□□ 0
SMG6-201ENST00000263073 ELL2O00472 640 aaPredicted RBP15.05■□□□□ 0
SMG6-201ENST00000263073 PAK3O75914 559 aaPredicted RBP15.05■□□□□ 0
SMG6-201ENST00000263073 GGT6Q6P531 493 aa15.05■□□□□ 0
SMG6-201ENST00000263073 VPS8Q8N3P4 1428 aa15.05■□□□□ -0
SMG6-201ENST00000263073 FAM13BQ9NYF5 915 aa15.05■□□□□ -0
SMG6-201ENST00000263073 FAM161AQ3B820 660 aa15.04■□□□□ -0
SMG6-201ENST00000263073 MROH2BQ7Z745 1585 aa15.03■□□□□ -0
SMG6-201ENST00000263073 ZNF592Q92610 1267 aa15.03■□□□□ -0
SMG6-201ENST00000263073 RRP1P56182 461 aaKnown RBP15.02■□□□□ -0
SMG6-201ENST00000263073 CCAR2Q8N163 923 aaKnown RBP15.02□□□□□ -0.01
SMG6-201ENST00000263073 FHAD1B1AJZ9 1412 aa15.02□□□□□ -0.01
SMG6-201ENST00000263073 COG6Q9Y2V7 657 aa15.02□□□□□ -0.01
SMG6-201ENST00000263073 CFAP44Q96MT7 982 aa15.01□□□□□ -0.01
SMG6-201ENST00000263073 CARMIL1Q5VZK9 1371 aa15.01□□□□□ -0.01
SMG6-201ENST00000263073 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms