RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 KIF7Q2M1P5 1343 aa20.23■□□□□ 0.83
XRCC1-201ENST00000262887 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
XRCC1-201ENST00000262887 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
XRCC1-201ENST00000262887 RNF123Q5XPI4 1314 aa20.21■□□□□ 0.83
XRCC1-201ENST00000262887 UGGT2Q9NYU1 1516 aa20.21■□□□□ 0.83
XRCC1-201ENST00000262887 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
XRCC1-201ENST00000262887 FOXD1Q16676 465 aa20.19■□□□□ 0.82
XRCC1-201ENST00000262887 KDM6BO15054 1643 aa20.19■□□□□ 0.82
XRCC1-201ENST00000262887 SAMD9Q5K651 1589 aa20.18■□□□□ 0.82
XRCC1-201ENST00000262887 NBPF8Q3BBV2 869 aa20.17■□□□□ 0.82
XRCC1-201ENST00000262887 ABCA5Q8WWZ7 1642 aa20.17■□□□□ 0.82
XRCC1-201ENST00000262887 TCOF1Q13428 1488 aaKnown RBP20.17■□□□□ 0.82
XRCC1-201ENST00000262887 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
XRCC1-201ENST00000262887 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
XRCC1-201ENST00000262887 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
XRCC1-201ENST00000262887 IL27Q8NEV9 243 aa20.15■□□□□ 0.82
XRCC1-201ENST00000262887 DNMBPQ6XZF7 1577 aa20.15■□□□□ 0.82
XRCC1-201ENST00000262887 SPATA31E1Q6ZUB1 1445 aa20.15■□□□□ 0.82
XRCC1-201ENST00000262887 CNGB1Q14028 1251 aaPredicted RBP20.14■□□□□ 0.81
XRCC1-201ENST00000262887 RPRD2Q5VT52 1461 aaKnown RBP20.13■□□□□ 0.81
XRCC1-201ENST00000262887 MAGI3Q5TCQ9 1506 aa20.12■□□□□ 0.81
XRCC1-201ENST00000262887 TEX14Q8IWB6 1497 aa20.12■□□□□ 0.81
XRCC1-201ENST00000262887 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
XRCC1-201ENST00000262887 TOPBP1Q92547 1522 aa20.09■□□□□ 0.81
XRCC1-201ENST00000262887 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.09■□□□□ 0.81
XRCC1-201ENST00000262887 DHX29Q7Z478 1369 aaKnown RBP20.08■□□□□ 0.81
XRCC1-201ENST00000262887 USP35Q9P2H5 1018 aa20.07■□□□□ 0.8
XRCC1-201ENST00000262887 RTN4Q9NQC3 1192 aaKnown RBP20.06■□□□□ 0.8
XRCC1-201ENST00000262887 KIF21AQ7Z4S6 1674 aa20.06■□□□□ 0.8
XRCC1-201ENST00000262887 SENP3-EIF4A1A0A087X0R7 540 aa20.06■□□□□ 0.8
XRCC1-201ENST00000262887 POLR3GLQ9BT43 218 aa20.06■□□□□ 0.8
XRCC1-201ENST00000262887 NPM2Q86SE8 214 aaKnown RBP20.05■□□□□ 0.8
XRCC1-201ENST00000262887 NEFMP07197 916 aa20.05■□□□□ 0.8
XRCC1-201ENST00000262887 MIA2Q96PC5 1412 aa20.05■□□□□ 0.8
XRCC1-201ENST00000262887 URB2Q14146 1524 aaKnown RBP20.03■□□□□ 0.8
XRCC1-201ENST00000262887 TDRD9Q8NDG6 1382 aaKnown RBP20.02■□□□□ 0.8
XRCC1-201ENST00000262887 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
XRCC1-201ENST00000262887 LAS1LQ9Y4W2 734 aaKnown RBP20.02■□□□□ 0.8
XRCC1-201ENST00000262887 SLC4A1APQ9BWU0 796 aaKnown RBP20.01■□□□□ 0.79
XRCC1-201ENST00000262887 TMC1Q8TDI8 760 aa20■□□□□ 0.79
XRCC1-201ENST00000262887 PNISRQ8TF01 805 aaKnown RBP20■□□□□ 0.79
XRCC1-201ENST00000262887 WASHC2CQ9Y4E1 1318 aa19.98■□□□□ 0.79
XRCC1-201ENST00000262887 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
XRCC1-201ENST00000262887 PDE4AP27815 886 aa19.98■□□□□ 0.79
XRCC1-201ENST00000262887 USP47Q96K76 1375 aa19.98■□□□□ 0.79
XRCC1-201ENST00000262887 ROCK1Q13464 1354 aa19.96■□□□□ 0.79
XRCC1-201ENST00000262887 RRP1P56182 461 aaKnown RBP19.96■□□□□ 0.79
XRCC1-201ENST00000262887 EPRSP07814 1512 aaKnown RBP19.95■□□□□ 0.78
XRCC1-201ENST00000262887 BCORL1Q5H9F3 1711 aa19.95■□□□□ 0.78
XRCC1-201ENST00000262887 DAPK1P53355 1430 aa19.94■□□□□ 0.78
XRCC1-201ENST00000262887 EXOC6Q8TAG9 804 aa19.94■□□□□ 0.78
XRCC1-201ENST00000262887 BACH2Q9BYV9 841 aa19.94■□□□□ 0.78
XRCC1-201ENST00000262887 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
XRCC1-201ENST00000262887 ARID4BQ4LE39 1312 aaPredicted RBP19.93■□□□□ 0.78
XRCC1-201ENST00000262887 MS4A1P11836 297 aa19.93■□□□□ 0.78
XRCC1-201ENST00000262887 CDK13Q14004 1512 aaKnown RBP19.92■□□□□ 0.78
XRCC1-201ENST00000262887 GAPVD1Q14C86 1478 aa19.91■□□□□ 0.78
XRCC1-201ENST00000262887 MBD5Q9P267 1494 aa19.9■□□□□ 0.78
XRCC1-201ENST00000262887 ROCK2O75116 1388 aaKnown RBP19.9■□□□□ 0.78
XRCC1-201ENST00000262887 LRPPRCP42704 1394 aaKnown RBP19.89■□□□□ 0.77
XRCC1-201ENST00000262887 LAMC3Q9Y6N6 1575 aa19.89■□□□□ 0.77
XRCC1-201ENST00000262887 ARID3CA6NKF2 412 aa19.89■□□□□ 0.77
XRCC1-201ENST00000262887 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
XRCC1-201ENST00000262887 ABCC5O15440 1437 aa19.88■□□□□ 0.77
XRCC1-201ENST00000262887 KIF15Q9NS87 1388 aa19.87■□□□□ 0.77
XRCC1-201ENST00000262887 PDS5BQ9NTI5 1447 aa19.87■□□□□ 0.77
XRCC1-201ENST00000262887 DNMT1P26358 1616 aaKnown RBP19.87■□□□□ 0.77
XRCC1-201ENST00000262887 KDM5CP41229 1560 aa19.87■□□□□ 0.77
XRCC1-201ENST00000262887 KIF14Q15058 1648 aa19.86■□□□□ 0.77
XRCC1-201ENST00000262887 ERCC6Q03468 1493 aa19.86■□□□□ 0.77
XRCC1-201ENST00000262887 BRD4O60885 1362 aaPredicted RBP19.85■□□□□ 0.77
XRCC1-201ENST00000262887 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
XRCC1-201ENST00000262887 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
XRCC1-201ENST00000262887 PZPP20742 1482 aa19.84■□□□□ 0.77
XRCC1-201ENST00000262887 GSE1Q14687 1217 aa19.83■□□□□ 0.77
XRCC1-201ENST00000262887 ZNF644Q9H582 1327 aaPredicted RBP19.83■□□□□ 0.76
XRCC1-201ENST00000262887 BRPF3Q9ULD4 1205 aa19.82■□□□□ 0.76
XRCC1-201ENST00000262887 WDR62O43379 1518 aa19.81■□□□□ 0.76
XRCC1-201ENST00000262887 RALBP1Q15311 655 aa19.8■□□□□ 0.76
XRCC1-201ENST00000262887 PKNOX2Q96KN3 472 aa19.8■□□□□ 0.76
XRCC1-201ENST00000262887 KTN1Q86UP2 1357 aaKnown RBP19.8■□□□□ 0.76
XRCC1-201ENST00000262887 KIAA1107Q9UPP5 1409 aa19.8■□□□□ 0.76
XRCC1-201ENST00000262887 EIF5BO60841 1220 aaKnown RBP19.79■□□□□ 0.76
XRCC1-201ENST00000262887 CARD11Q9BXL7 1154 aa19.78■□□□□ 0.76
XRCC1-201ENST00000262887 PDE3BQ13370 1112 aa19.78■□□□□ 0.76
XRCC1-201ENST00000262887 ZNF608Q9ULD9 1512 aaPredicted RBP19.77■□□□□ 0.76
XRCC1-201ENST00000262887 IQGAP2Q13576 1575 aa19.76■□□□□ 0.75
XRCC1-201ENST00000262887 RALGAPBQ86X10 1494 aa19.76■□□□□ 0.75
XRCC1-201ENST00000262887 NFKBIBQ15653 356 aa19.76■□□□□ 0.75
XRCC1-201ENST00000262887 PKD2Q13563 968 aa19.75■□□□□ 0.75
XRCC1-201ENST00000262887 UHRF1BP1Q6BDS2 1440 aa19.73■□□□□ 0.75
XRCC1-201ENST00000262887 FBLN2P98095 1184 aa19.73■□□□□ 0.75
XRCC1-201ENST00000262887 ST20-MTHFSA0A0A6YYL1 179 aa19.72■□□□□ 0.75
XRCC1-201ENST00000262887 NLRP13Q86W25 1043 aa19.72■□□□□ 0.75
XRCC1-201ENST00000262887 FRAT1Q92837 279 aaPredicted RBP19.71■□□□□ 0.75
XRCC1-201ENST00000262887 PLIN1O60240 522 aa19.71■□□□□ 0.75
XRCC1-201ENST00000262887 SKAP1Q86WV1 359 aa19.71■□□□□ 0.74
XRCC1-201ENST00000262887 CDCA7LQ96GN5 454 aa19.71■□□□□ 0.74
XRCC1-201ENST00000262887 DAXXQ9UER7 740 aaPredicted RBP19.7■□□□□ 0.74
XRCC1-201ENST00000262887 CRBNQ96SW2 442 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms