RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CDC42BPBQ9Y5S2 1711 aa28.16■■■□□ 2.1
COL4A3BP-201ENST00000261415 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.14■■■□□ 2.1
COL4A3BP-201ENST00000261415 TCOF1Q13428 1488 aaKnown RBP28.13■■■□□ 2.09
COL4A3BP-201ENST00000261415 KCNH8Q96L42 1107 aa28.13■■■□□ 2.09
COL4A3BP-201ENST00000261415 FAM50AQ14320 339 aaKnown RBP28.12■■■□□ 2.09
COL4A3BP-201ENST00000261415 MAPKBP1O60336 1514 aa28.12■■■□□ 2.09
COL4A3BP-201ENST00000261415 ABCA9Q8IUA7 1624 aa28.09■■■□□ 2.09
COL4A3BP-201ENST00000261415 CFDP1Q9UEE9 299 aaPredicted RBP28.04■■■□□ 2.08
COL4A3BP-201ENST00000261415 CAMSAP2Q08AD1 1489 aa28.04■■■□□ 2.08
COL4A3BP-201ENST00000261415 ITGAEP38570 1179 aa28.01■■■□□ 2.07
COL4A3BP-201ENST00000261415 ARHGAP5Q13017 1502 aa28.01■■■□□ 2.07
COL4A3BP-201ENST00000261415 DNMT1P26358 1616 aaKnown RBP27.99■■■□□ 2.07
COL4A3BP-201ENST00000261415 SAMD9LQ8IVG5 1584 aa27.99■■■□□ 2.07
COL4A3BP-201ENST00000261415 ZNF644Q9H582 1327 aaPredicted RBP27.98■■■□□ 2.07
COL4A3BP-201ENST00000261415 ARAP3Q8WWN8 1544 aa27.97■■■□□ 2.07
COL4A3BP-201ENST00000261415 PLCH2O75038 1416 aa27.97■■■□□ 2.07
COL4A3BP-201ENST00000261415 ZNF777Q9ULD5 760 aaPredicted RBP27.95■■■□□ 2.06
COL4A3BP-201ENST00000261415 CROCC2H7BZ55 1655 aa27.94■■■□□ 2.06
COL4A3BP-201ENST00000261415 PTPRKQ15262 1439 aa27.91■■■□□ 2.06
COL4A3BP-201ENST00000261415 DIP2BQ9P265 1576 aa27.9■■■□□ 2.06
COL4A3BP-201ENST00000261415 DAPK1P53355 1430 aa27.89■■■□□ 2.06
COL4A3BP-201ENST00000261415 DNAJC5Q9H3Z4 198 aa27.89■■■□□ 2.05
COL4A3BP-201ENST00000261415 GLI2P10070 1586 aa27.88■■■□□ 2.05
COL4A3BP-201ENST00000261415 MAP3K4Q9Y6R4 1608 aa27.88■■■□□ 2.05
COL4A3BP-201ENST00000261415 ARHGEF5Q12774 1597 aa27.87■■■□□ 2.05
COL4A3BP-201ENST00000261415 ABCC5O15440 1437 aa27.86■■■□□ 2.05
COL4A3BP-201ENST00000261415 SYCP2Q9BX26 1530 aa27.85■■■□□ 2.05
COL4A3BP-201ENST00000261415 ADGBQ8N7X0 1667 aa27.85■■■□□ 2.05
COL4A3BP-201ENST00000261415 KIF13AQ9H1H9 1805 aa27.84■■■□□ 2.05
COL4A3BP-201ENST00000261415 ABCC1P33527 1531 aa27.83■■■□□ 2.05
COL4A3BP-201ENST00000261415 PLEKHH2Q8IVE3 1493 aa27.83■■■□□ 2.05
COL4A3BP-201ENST00000261415 CD109Q6YHK3 1445 aa27.83■■■□□ 2.05
COL4A3BP-201ENST00000261415 FANCAO15360 1455 aa27.83■■■□□ 2.05
COL4A3BP-201ENST00000261415 EFCAB2Q5VUJ9 269 aa27.83■■■□□ 2.04
COL4A3BP-201ENST00000261415 MBD5Q9P267 1494 aa27.82■■■□□ 2.04
COL4A3BP-201ENST00000261415 CFAP74Q9C0B2 1584 aa27.82■■■□□ 2.04
COL4A3BP-201ENST00000261415 GCC2Q8IWJ2 1684 aa27.8■■■□□ 2.04
COL4A3BP-201ENST00000261415 KIAA1107Q9UPP5 1409 aa27.79■■■□□ 2.04
COL4A3BP-201ENST00000261415 CCDC141Q6ZP82 1450 aa27.77■■■□□ 2.04
COL4A3BP-201ENST00000261415 ARHGEF12Q9NZN5 1544 aa27.77■■■□□ 2.04
COL4A3BP-201ENST00000261415 SHANK2Q9UPX8 1470 aa27.76■■■□□ 2.04
COL4A3BP-201ENST00000261415 TSPOAP1O95153 1857 aa27.76■■■□□ 2.03
COL4A3BP-201ENST00000261415 HNRNPMP52272 730 aaKnown RBP eCLIP27.76■■■□□ 2.037e-7■■■■□ 23.6
COL4A3BP-201ENST00000261415 BCL11AQ9H165 835 aa27.75■■■□□ 2.03
COL4A3BP-201ENST00000261415 CHIC2Q9UKJ5 165 aa27.75■■■□□ 2.03
COL4A3BP-201ENST00000261415 HFM1A2PYH4 1435 aa27.75■■■□□ 2.03
COL4A3BP-201ENST00000261415 AKNAQ7Z591 1439 aa27.75■■■□□ 2.03
COL4A3BP-201ENST00000261415 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
COL4A3BP-201ENST00000261415 FAM69CQ0P6D2 419 aa27.71■■■□□ 2.03
COL4A3BP-201ENST00000261415 PPRC1Q5VV67 1664 aaKnown RBP27.71■■■□□ 2.03
COL4A3BP-201ENST00000261415 ROCK1Q13464 1354 aa27.71■■■□□ 2.03
COL4A3BP-201ENST00000261415 ADGRL1O94910 1474 aa27.71■■■□□ 2.03
COL4A3BP-201ENST00000261415 ADGRL2O95490 1459 aa27.71■■■□□ 2.03
COL4A3BP-201ENST00000261415 NAIPQ13075 1403 aa27.7■■■□□ 2.03
COL4A3BP-201ENST00000261415 MAST1Q9Y2H9 1570 aa27.7■■■□□ 2.02
COL4A3BP-201ENST00000261415 C9orf84Q5VXU9 1444 aa27.69■■■□□ 2.02
COL4A3BP-201ENST00000261415 RAB3GAP2Q9H2M9 1393 aa27.69■■■□□ 2.02
COL4A3BP-201ENST00000261415 RSPH4AQ5TD94 716 aa27.69■■■□□ 2.02
COL4A3BP-201ENST00000261415 NEO1Q92859 1461 aa27.66■■■□□ 2.02
COL4A3BP-201ENST00000261415 DIEXFQ68CQ4 756 aaKnown RBP27.66■■■□□ 2.02
COL4A3BP-201ENST00000261415 RRP7BPQ9NSQ0 103 aa27.66■■■□□ 2.02
COL4A3BP-201ENST00000261415 TRAPPC8Q9Y2L5 1435 aa27.65■■■□□ 2.02
COL4A3BP-201ENST00000261415 TSPY4P0CV99 314 aa27.64■■■□□ 2.02
COL4A3BP-201ENST00000261415 TSPY10P0CW01 314 aa27.64■■■□□ 2.02
COL4A3BP-201ENST00000261415 NCOA1Q15788 1441 aa27.64■■■□□ 2.02
COL4A3BP-201ENST00000261415 SCAPERQ9BY12 1400 aa27.62■■■□□ 2.01
COL4A3BP-201ENST00000261415 KDM6BO15054 1643 aa27.62■■■□□ 2.01
COL4A3BP-201ENST00000261415 ANKRD30AQ9BXX3 1397 aa27.61■■■□□ 2.01
COL4A3BP-201ENST00000261415 PLXNC1O60486 1568 aa27.6■■■□□ 2.01
COL4A3BP-201ENST00000261415 INO80Q9ULG1 1556 aaPredicted RBP27.57■■■□□ 2
COL4A3BP-201ENST00000261415 TEX14Q8IWB6 1497 aa27.57■■■□□ 2
COL4A3BP-201ENST00000261415 ZFYVE16Q7Z3T8 1539 aa27.56■■■□□ 2
COL4A3BP-201ENST00000261415 RICTORQ6R327 1708 aa27.55■■■□□ 2
COL4A3BP-201ENST00000261415 ZNF518AQ6AHZ1 1483 aa27.55■■■□□ 2
COL4A3BP-201ENST00000261415 POGZQ7Z3K3 1410 aa27.53■■■□□ 2
COL4A3BP-201ENST00000261415 AFAP1Q8N556 730 aa27.53■■■□□ 2
COL4A3BP-201ENST00000261415 KDM5CP41229 1560 aa27.53■■■□□ 2
COL4A3BP-201ENST00000261415 CCER1Q8TC90 406 aaPredicted RBP27.52■■■□□ 2
COL4A3BP-201ENST00000261415 ATP7AQ04656 1500 aa27.51■■■□□ 2
COL4A3BP-201ENST00000261415 KIF15Q9NS87 1388 aa27.51■■□□□ 1.99
COL4A3BP-201ENST00000261415 KIDINS220Q9ULH0 1771 aa27.5■■□□□ 1.99
COL4A3BP-201ENST00000261415 RTEL1-TNFRSF6BF6WH68 1400 aa27.5■■□□□ 1.99
COL4A3BP-201ENST00000261415 SPAG9O60271 1321 aaKnown RBP27.49■■□□□ 1.99
COL4A3BP-201ENST00000261415 DENND4BO75064 1496 aaPredicted RBP27.48■■□□□ 1.99
COL4A3BP-201ENST00000261415 DHX57Q6P158 1386 aaKnown RBP27.48■■□□□ 1.99
COL4A3BP-201ENST00000261415 ANKRD50Q9ULJ7 1429 aa27.47■■□□□ 1.99
COL4A3BP-201ENST00000261415 HECW2Q9P2P5 1572 aa27.47■■□□□ 1.99
COL4A3BP-201ENST00000261415 FRMPD1Q5SYB0 1578 aa27.45■■□□□ 1.98
COL4A3BP-201ENST00000261415 DUOX2Q9NRD8 1548 aa27.44■■□□□ 1.98
COL4A3BP-201ENST00000261415 ANP32EQ9BTT0 268 aa27.42■■□□□ 1.98
COL4A3BP-201ENST00000261415 MLH3Q9UHC1 1453 aa27.4■■□□□ 1.98
COL4A3BP-201ENST00000261415 RAPGEF3O95398 923 aa27.38■■□□□ 1.97
COL4A3BP-201ENST00000261415 ABCA6Q8N139 1617 aa27.37■■□□□ 1.97
COL4A3BP-201ENST00000261415 ZMYM4Q5VZL5 1548 aa27.36■■□□□ 1.97
COL4A3BP-201ENST00000261415 ERBINQ96RT1 1412 aa27.36■■□□□ 1.97
COL4A3BP-201ENST00000261415 MYT1LQ9UL68 1186 aa27.35■■□□□ 1.97
COL4A3BP-201ENST00000261415 TRHP20396 242 aaPredicted RBP27.34■■□□□ 1.97
COL4A3BP-201ENST00000261415 UNC13BO14795 1591 aa27.33■■□□□ 1.97
COL4A3BP-201ENST00000261415 TRIM52Q96A61 297 aa27.33■■□□□ 1.97
COL4A3BP-201ENST00000261415 EIF2AK4Q9P2K8 1649 aaKnown RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms