RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 ABCA6Q8N139 1617 aa9.74□□□□□ -0.85
TOPBP1-201ENST00000260810 ZNF644Q9H582 1327 aaPredicted RBP9.74□□□□□ -0.85
TOPBP1-201ENST00000260810 ZNF518AQ6AHZ1 1483 aa9.73□□□□□ -0.85
TOPBP1-201ENST00000260810 MYO5CQ9NQX4 1742 aa9.72□□□□□ -0.85
TOPBP1-201ENST00000260810 NCOA2Q15596 1464 aa9.72□□□□□ -0.85
TOPBP1-201ENST00000260810 MROH2AA6NES4 1674 aa9.72□□□□□ -0.85
TOPBP1-201ENST00000260810 HECW1Q76N89 1606 aa9.71□□□□□ -0.86
TOPBP1-201ENST00000260810 ABCC1P33527 1531 aa9.7□□□□□ -0.86
TOPBP1-201ENST00000260810 E9PCH4 1651 aa9.69□□□□□ -0.86
TOPBP1-201ENST00000260810 PZPP20742 1482 aa9.69□□□□□ -0.86
TOPBP1-201ENST00000260810 NAIPQ13075 1403 aa9.68□□□□□ -0.86
TOPBP1-201ENST00000260810 ZFYVE16Q7Z3T8 1539 aa9.67□□□□□ -0.86
TOPBP1-201ENST00000260810 MAST1Q9Y2H9 1570 aa9.67□□□□□ -0.86
TOPBP1-201ENST00000260810 ABCC5O15440 1437 aa9.66□□□□□ -0.86
TOPBP1-201ENST00000260810 UNC13BO14795 1591 aa9.65□□□□□ -0.86
TOPBP1-201ENST00000260810 PIK3C2BO00750 1634 aa9.65□□□□□ -0.86
TOPBP1-201ENST00000260810 PTPRGP23470 1445 aa9.64□□□□□ -0.87
TOPBP1-201ENST00000260810 JPH4Q96JJ6 628 aa9.64□□□□□ -0.87
TOPBP1-201ENST00000260810 MKI67P46013 3256 aaKnown RBP9.63□□□□□ -0.87
TOPBP1-201ENST00000260810 EHBP1L1Q8N3D4 1523 aa9.62□□□□□ -0.87
TOPBP1-201ENST00000260810 GLI2P10070 1586 aa9.62□□□□□ -0.87
TOPBP1-201ENST00000260810 ARHGEF5Q12774 1597 aa9.62□□□□□ -0.87
TOPBP1-201ENST00000260810 TSPOAP1O95153 1857 aa9.62□□□□□ -0.87
TOPBP1-201ENST00000260810 FGD6Q6ZV73 1430 aa9.61□□□□□ -0.87
TOPBP1-201ENST00000260810 P3H3Q8IVL6 736 aa9.61□□□□□ -0.87
TOPBP1-201ENST00000260810 CEP350Q5VT06 3117 aa9.61□□□□□ -0.87
TOPBP1-201ENST00000260810 ADGRL2O95490 1459 aa9.61□□□□□ -0.87
TOPBP1-201ENST00000260810 NRXN3Q9Y4C0 1643 aa9.61□□□□□ -0.87
TOPBP1-201ENST00000260810 SYCP2Q9BX26 1530 aa9.61□□□□□ -0.87
TOPBP1-201ENST00000260810 CEP152O94986 1710 aa9.6□□□□□ -0.87
TOPBP1-201ENST00000260810 TRAPPC8Q9Y2L5 1435 aa9.6□□□□□ -0.87
TOPBP1-201ENST00000260810 KDM5DQ9BY66 1539 aa9.59□□□□□ -0.87
TOPBP1-201ENST00000260810 RNF17Q9BXT8 1623 aaKnown RBP9.59□□□□□ -0.87
TOPBP1-201ENST00000260810 DIP2CQ9Y2E4 1556 aa9.59□□□□□ -0.87
TOPBP1-201ENST00000260810 CAMSAP2Q08AD1 1489 aa9.58□□□□□ -0.88
TOPBP1-201ENST00000260810 DHX57Q6P158 1386 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-201ENST00000260810 SYNMO15061 1565 aa9.58□□□□□ -0.88
TOPBP1-201ENST00000260810 SPHKAPQ2M3C7 1700 aa9.57□□□□□ -0.88
TOPBP1-201ENST00000260810 ARAP3Q8WWN8 1544 aa9.57□□□□□ -0.88
TOPBP1-201ENST00000260810 MARF1Q9Y4F3 1742 aaKnown RBP9.57□□□□□ -0.88
TOPBP1-201ENST00000260810 EYSQ5T1H1 3165 aa9.56□□□□□ -0.88
TOPBP1-201ENST00000260810 UACAQ9BZF9 1416 aa9.56□□□□□ -0.88
TOPBP1-201ENST00000260810 UGGT1Q9NYU2 1555 aa9.56□□□□□ -0.88
TOPBP1-201ENST00000260810 IQGAP3Q86VI3 1631 aa9.56□□□□□ -0.88
TOPBP1-201ENST00000260810 TEX14Q8IWB6 1497 aa9.56□□□□□ -0.88
TOPBP1-201ENST00000260810 STRCP1A6NGW2 1772 aa9.55□□□□□ -0.88
TOPBP1-201ENST00000260810 TROQ12816 1431 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-201ENST00000260810 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.54□□□□□ -0.88
TOPBP1-201ENST00000260810 MYOM3Q5VTT5 1437 aa9.54□□□□□ -0.88
TOPBP1-201ENST00000260810 NCOA1Q15788 1441 aa9.53□□□□□ -0.88
TOPBP1-201ENST00000260810 MYOM1P52179 1685 aa9.53□□□□□ -0.88
TOPBP1-201ENST00000260810 XIRP1Q702N8 1843 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-201ENST00000260810 ZC3H13Q5T200 1668 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-201ENST00000260810 CFAP65Q6ZU64 1925 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-201ENST00000260810 POLR1AO95602 1720 aaPredicted RBP9.52□□□□□ -0.89
TOPBP1-201ENST00000260810 ZMYM4Q5VZL5 1548 aa9.51□□□□□ -0.89
TOPBP1-201ENST00000260810 ASXL2Q76L83 1435 aa9.51□□□□□ -0.89
TOPBP1-201ENST00000260810 HFM1A2PYH4 1435 aa9.51□□□□□ -0.89
TOPBP1-201ENST00000260810 PRDM15P57071 1507 aaPredicted RBP9.51□□□□□ -0.89
TOPBP1-201ENST00000260810 ASXL1Q8IXJ9 1541 aa9.51□□□□□ -0.89
TOPBP1-201ENST00000260810 DAPK1P53355 1430 aa9.5□□□□□ -0.89
TOPBP1-201ENST00000260810 KDM5AP29375 1690 aaKnown RBP9.5□□□□□ -0.89
TOPBP1-201ENST00000260810 CLTCL1P53675 1640 aa9.5□□□□□ -0.89
TOPBP1-201ENST00000260810 AKNAQ7Z591 1439 aa9.49□□□□□ -0.89
TOPBP1-201ENST00000260810 FMN1Q68DA7 1419 aa9.48□□□□□ -0.89
TOPBP1-201ENST00000260810 WDR7Q9Y4E6 1490 aa9.48□□□□□ -0.89
TOPBP1-201ENST00000260810 DNAH12Q6ZR08 3092 aa9.48□□□□□ -0.89
TOPBP1-201ENST00000260810 PPLO60437 1756 aa9.46□□□□□ -0.89
TOPBP1-201ENST00000260810 CCDC18Q5T9S5 1454 aa9.46□□□□□ -0.89
TOPBP1-201ENST00000260810 YEATS2Q9ULM3 1422 aa9.46□□□□□ -0.9
TOPBP1-201ENST00000260810 SPATA31E1Q6ZUB1 1445 aa9.45□□□□□ -0.9
TOPBP1-201ENST00000260810 ALKQ9UM73 1620 aa9.45□□□□□ -0.9
TOPBP1-201ENST00000260810 HTTP42858 3142 aa9.45□□□□□ -0.9
TOPBP1-201ENST00000260810 HECW2Q9P2P5 1572 aa9.45□□□□□ -0.9
TOPBP1-201ENST00000260810 PLCH2O75038 1416 aa9.44□□□□□ -0.9
TOPBP1-201ENST00000260810 TRPM1Q7Z4N2 1603 aa9.44□□□□□ -0.9
TOPBP1-201ENST00000260810 CAMSAP1Q5T5Y3 1602 aa9.43□□□□□ -0.9
TOPBP1-201ENST00000260810 REREQ9P2R6 1566 aa9.43□□□□□ -0.9
TOPBP1-201ENST00000260810 FAM135AQ9P2D6 1515 aa9.43□□□□□ -0.9
TOPBP1-201ENST00000260810 SHANK2Q9UPX8 1470 aa9.43□□□□□ -0.9
TOPBP1-201ENST00000260810 CCNB3Q8WWL7 1395 aa9.42□□□□□ -0.9
TOPBP1-201ENST00000260810 RAB3GAP2Q9H2M9 1393 aa9.42□□□□□ -0.9
TOPBP1-201ENST00000260810 TMEM131LA2VDJ0 1609 aa9.41□□□□□ -0.9
TOPBP1-201ENST00000260810 C3P01024 1663 aa9.41□□□□□ -0.9
TOPBP1-201ENST00000260810 ADAMTSL3P82987 1691 aa9.41□□□□□ -0.9
TOPBP1-201ENST00000260810 IQGAP1P46940 1657 aa9.41□□□□□ -0.9
TOPBP1-201ENST00000260810 EIF2AK4Q9P2K8 1649 aaKnown RBP9.4□□□□□ -0.9
TOPBP1-201ENST00000260810 MIA2Q96PC5 1412 aa9.4□□□□□ -0.9
TOPBP1-201ENST00000260810 STRCQ7RTU9 1775 aa9.4□□□□□ -0.9
TOPBP1-201ENST00000260810 PCGF6Q9BYE7 350 aa9.4□□□□□ -0.91
TOPBP1-201ENST00000260810 PREX1Q8TCU6 1659 aa9.39□□□□□ -0.91
TOPBP1-201ENST00000260810 ATP10AO60312 1499 aa9.39□□□□□ -0.91
TOPBP1-201ENST00000260810 CDH23Q9H251 3354 aa9.39□□□□□ -0.91
TOPBP1-201ENST00000260810 MADDQ8WXG6 1647 aa9.39□□□□□ -0.91
TOPBP1-201ENST00000260810 RANGAP1P46060 587 aaPredicted RBP9.38□□□□□ -0.91
TOPBP1-201ENST00000260810 PLEKHH2Q8IVE3 1493 aa9.38□□□□□ -0.91
TOPBP1-201ENST00000260810 ADGRB1O14514 1584 aa9.38□□□□□ -0.91
TOPBP1-201ENST00000260810 A2MP01023 1474 aa9.38□□□□□ -0.91
TOPBP1-201ENST00000260810 PTPRMP28827 1452 aa9.37□□□□□ -0.91
TOPBP1-201ENST00000260810 XIRP2A4UGR9 3374 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms