RNA–Protein interactions for RNA: ENST00000259951.11

HLA-F-216, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS P4 BASIC

Gene HLA-F, Length 1,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-216ENST00000259951 CAMSAP2Q08AD1 1489 aa25.08■■□□□ 1.61
HLA-F-216ENST00000259951 DNMT1P26358 1616 aaKnown RBP25.05■■□□□ 1.6
HLA-F-216ENST00000259951 ABCA9Q8IUA7 1624 aa25.03■■□□□ 1.6
HLA-F-216ENST00000259951 ZNF777Q9ULD5 760 aaPredicted RBP25.02■■□□□ 1.6
HLA-F-216ENST00000259951 ARHGAP5Q13017 1502 aa25.02■■□□□ 1.6
HLA-F-216ENST00000259951 MAPKBP1O60336 1514 aa25.01■■□□□ 1.59
HLA-F-216ENST00000259951 ARAP3Q8WWN8 1544 aa25.01■■□□□ 1.59
HLA-F-216ENST00000259951 PLCH2O75038 1416 aa25.01■■□□□ 1.59
HLA-F-216ENST00000259951 ZNF644Q9H582 1327 aaPredicted RBP25.01■■□□□ 1.59
HLA-F-216ENST00000259951 DAPK1P53355 1430 aa24.99■■□□□ 1.59
HLA-F-216ENST00000259951 PTPRKQ15262 1439 aa24.99■■□□□ 1.59
HLA-F-216ENST00000259951 SETD5Q9C0A6 1442 aa24.99■■□□□ 1.59
HLA-F-216ENST00000259951 PLEKHH2Q8IVE3 1493 aa24.97■■□□□ 1.59
HLA-F-216ENST00000259951 SAMD9LQ8IVG5 1584 aa24.96■■□□□ 1.59
HLA-F-216ENST00000259951 ABCC5O15440 1437 aa24.96■■□□□ 1.59
HLA-F-216ENST00000259951 CROCC2H7BZ55 1655 aa24.95■■□□□ 1.59
HLA-F-216ENST00000259951 AKNAQ7Z591 1439 aa24.95■■□□□ 1.58
HLA-F-216ENST00000259951 HFM1A2PYH4 1435 aa24.94■■□□□ 1.58
HLA-F-216ENST00000259951 ARHGEF5Q12774 1597 aa24.94■■□□□ 1.58
HLA-F-216ENST00000259951 CCER1Q8TC90 406 aaPredicted RBP24.94■■□□□ 1.58
HLA-F-216ENST00000259951 EFCAB2Q5VUJ9 269 aa24.94■■□□□ 1.58
HLA-F-216ENST00000259951 HRCP23327 699 aa24.92■■□□□ 1.58
HLA-F-216ENST00000259951 RSPH4AQ5TD94 716 aa24.92■■□□□ 1.58
HLA-F-216ENST00000259951 ROCK1Q13464 1354 aa24.91■■□□□ 1.58
HLA-F-216ENST00000259951 RAB3GAP2Q9H2M9 1393 aa24.91■■□□□ 1.58
HLA-F-216ENST00000259951 ADGBQ8N7X0 1667 aa24.91■■□□□ 1.58
HLA-F-216ENST00000259951 GCC2Q8IWJ2 1684 aa24.91■■□□□ 1.58
HLA-F-216ENST00000259951 KIAA1107Q9UPP5 1409 aa24.89■■□□□ 1.58
HLA-F-216ENST00000259951 SHANK2Q9UPX8 1470 aa24.89■■□□□ 1.58
HLA-F-216ENST00000259951 ZEB1P37275 1124 aaPredicted RBP24.88■■□□□ 1.57
HLA-F-216ENST00000259951 CHIC2Q9UKJ5 165 aa24.87■■□□□ 1.57
HLA-F-216ENST00000259951 NAIPQ13075 1403 aa24.87■■□□□ 1.57
HLA-F-216ENST00000259951 MBD5Q9P267 1494 aa24.86■■□□□ 1.57
HLA-F-216ENST00000259951 CCDC141Q6ZP82 1450 aa24.86■■□□□ 1.57
HLA-F-216ENST00000259951 SYCP2Q9BX26 1530 aa24.85■■□□□ 1.57
HLA-F-216ENST00000259951 TSPY4P0CV99 314 aa24.84■■□□□ 1.57
HLA-F-216ENST00000259951 TSPY10P0CW01 314 aa24.84■■□□□ 1.57
HLA-F-216ENST00000259951 ADGRL2O95490 1459 aa24.84■■□□□ 1.57
HLA-F-216ENST00000259951 CFAP74Q9C0B2 1584 aa24.83■■□□□ 1.57
HLA-F-216ENST00000259951 HNRNPMP52272 730 aaKnown RBP eCLIP24.83■■□□□ 1.57
HLA-F-216ENST00000259951 FANCAO15360 1455 aa24.83■■□□□ 1.57
HLA-F-216ENST00000259951 ABCC1P33527 1531 aa24.83■■□□□ 1.57
HLA-F-216ENST00000259951 CD109Q6YHK3 1445 aa24.82■■□□□ 1.56
HLA-F-216ENST00000259951 GLI2P10070 1586 aa24.82■■□□□ 1.56
HLA-F-216ENST00000259951 ANKRD30AQ9BXX3 1397 aa24.81■■□□□ 1.56
HLA-F-216ENST00000259951 RRP7BPQ9NSQ0 103 aa24.81■■□□□ 1.56
HLA-F-216ENST00000259951 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
HLA-F-216ENST00000259951 C9orf84Q5VXU9 1444 aa24.8■■□□□ 1.56
HLA-F-216ENST00000259951 MAST1Q9Y2H9 1570 aa24.78■■□□□ 1.56
HLA-F-216ENST00000259951 NCOA1Q15788 1441 aa24.77■■□□□ 1.56
HLA-F-216ENST00000259951 MAP3K4Q9Y6R4 1608 aa24.76■■□□□ 1.55
HLA-F-216ENST00000259951 DHX57Q6P158 1386 aaKnown RBP24.76■■□□□ 1.55
HLA-F-216ENST00000259951 DIP2BQ9P265 1576 aa24.75■■□□□ 1.55
HLA-F-216ENST00000259951 ARHGEF12Q9NZN5 1544 aa24.74■■□□□ 1.55
HLA-F-216ENST00000259951 CLSPNQ9HAW4 1339 aa24.74■■□□□ 1.55
HLA-F-216ENST00000259951 ADGRL1O94910 1474 aa24.72■■□□□ 1.55
HLA-F-216ENST00000259951 NEO1Q92859 1461 aa24.69■■□□□ 1.54
HLA-F-216ENST00000259951 PLXNC1O60486 1568 aa24.68■■□□□ 1.54
HLA-F-216ENST00000259951 FAM69CQ0P6D2 419 aa24.68■■□□□ 1.54
HLA-F-216ENST00000259951 SCAPERQ9BY12 1400 aa24.67■■□□□ 1.54
HLA-F-216ENST00000259951 TRAPPC8Q9Y2L5 1435 aa24.67■■□□□ 1.54
HLA-F-216ENST00000259951 KDM6BO15054 1643 aa24.66■■□□□ 1.54
HLA-F-216ENST00000259951 KIF13AQ9H1H9 1805 aa24.66■■□□□ 1.54
HLA-F-216ENST00000259951 KIF15Q9NS87 1388 aa24.65■■□□□ 1.54
HLA-F-216ENST00000259951 RTEL1-TNFRSF6BF6WH68 1400 aa24.64■■□□□ 1.54
HLA-F-216ENST00000259951 ANKRD50Q9ULJ7 1429 aa24.63■■□□□ 1.53
HLA-F-216ENST00000259951 SPAG9O60271 1321 aaKnown RBP24.62■■□□□ 1.53
HLA-F-216ENST00000259951 ZNF518AQ6AHZ1 1483 aa24.61■■□□□ 1.53
HLA-F-216ENST00000259951 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
HLA-F-216ENST00000259951 AFAP1Q8N556 730 aa24.58■■□□□ 1.53
HLA-F-216ENST00000259951 TRIM52Q96A61 297 aa24.58■■□□□ 1.53
HLA-F-216ENST00000259951 INO80Q9ULG1 1556 aaPredicted RBP24.58■■□□□ 1.53
HLA-F-216ENST00000259951 ZFYVE16Q7Z3T8 1539 aa24.58■■□□□ 1.53
HLA-F-216ENST00000259951 DUOX2Q9NRD8 1548 aa24.58■■□□□ 1.53
HLA-F-216ENST00000259951 ATP7AQ04656 1500 aa24.57■■□□□ 1.52
HLA-F-216ENST00000259951 TSPOAP1O95153 1857 aa24.56■■□□□ 1.52
HLA-F-216ENST00000259951 POGZQ7Z3K3 1410 aa24.56■■□□□ 1.52
HLA-F-216ENST00000259951 DENND4BO75064 1496 aaPredicted RBP24.54■■□□□ 1.52
HLA-F-216ENST00000259951 KDM5CP41229 1560 aa24.54■■□□□ 1.52
HLA-F-216ENST00000259951 PPRC1Q5VV67 1664 aaKnown RBP24.53■■□□□ 1.52
HLA-F-216ENST00000259951 ERBINQ96RT1 1412 aa24.51■■□□□ 1.51
HLA-F-216ENST00000259951 MYT1LQ9UL68 1186 aa24.49■■□□□ 1.51
HLA-F-216ENST00000259951 HECW2Q9P2P5 1572 aa24.49■■□□□ 1.51
HLA-F-216ENST00000259951 KIDINS220Q9ULH0 1771 aa24.48■■□□□ 1.51
HLA-F-216ENST00000259951 RICTORQ6R327 1708 aa24.48■■□□□ 1.51
HLA-F-216ENST00000259951 MLH3Q9UHC1 1453 aa24.48■■□□□ 1.51
HLA-F-216ENST00000259951 MPHOSPH9Q99550 1183 aa24.47■■□□□ 1.51
HLA-F-216ENST00000259951 KDM5DQ9BY66 1539 aa24.46■■□□□ 1.51
HLA-F-216ENST00000259951 UNC13BO14795 1591 aa24.45■■□□□ 1.5
HLA-F-216ENST00000259951 SLC4A1APQ9BWU0 796 aaKnown RBP24.43■■□□□ 1.5
HLA-F-216ENST00000259951 PZPP20742 1482 aa24.42■■□□□ 1.5
HLA-F-216ENST00000259951 NUP155O75694 1391 aa24.42■■□□□ 1.5
HLA-F-216ENST00000259951 EIF2AK4Q9P2K8 1649 aaKnown RBP24.41■■□□□ 1.5
HLA-F-216ENST00000259951 DHX29Q7Z478 1369 aaKnown RBP24.39■■□□□ 1.49
HLA-F-216ENST00000259951 RAPGEF3O95398 923 aa24.39■■□□□ 1.49
HLA-F-216ENST00000259951 ZMYM4Q5VZL5 1548 aa24.37■■□□□ 1.49
HLA-F-216ENST00000259951 FRMPD1Q5SYB0 1578 aa24.36■■□□□ 1.49
HLA-F-216ENST00000259951 MAGI2Q86UL8 1455 aa24.36■■□□□ 1.49
HLA-F-216ENST00000259951 A2MP01023 1474 aa24.36■■□□□ 1.49
HLA-F-216ENST00000259951 IQGAP3Q86VI3 1631 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms