RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
PGBD1-201ENST00000259883 GRIN2BQ13224 1484 aa18■□□□□ 0.47
PGBD1-201ENST00000259883 LRRIQ1Q96JM4 1722 aa17.99■□□□□ 0.47
PGBD1-201ENST00000259883 PDS5BQ9NTI5 1447 aa17.98■□□□□ 0.47
PGBD1-201ENST00000259883 SUPT6HQ7KZ85 1726 aaKnown RBP17.98■□□□□ 0.47
PGBD1-201ENST00000259883 PAK3O75914 559 aaPredicted RBP17.97■□□□□ 0.47
PGBD1-201ENST00000259883 TMC1Q8TDI8 760 aa17.97■□□□□ 0.47
PGBD1-201ENST00000259883 PKD2Q13563 968 aa17.96■□□□□ 0.47
PGBD1-201ENST00000259883 CFDP1Q9UEE9 299 aaPredicted RBP17.96■□□□□ 0.47
PGBD1-201ENST00000259883 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
PGBD1-201ENST00000259883 FANCIQ9NVI1 1328 aa17.95■□□□□ 0.46
PGBD1-201ENST00000259883 EHBP1L1Q8N3D4 1523 aa17.94■□□□□ 0.46
PGBD1-201ENST00000259883 CUL7Q14999 1698 aa17.94■□□□□ 0.46
PGBD1-201ENST00000259883 UGGT2Q9NYU1 1516 aa17.92■□□□□ 0.46
PGBD1-201ENST00000259883 EPRSP07814 1512 aaKnown RBP17.91■□□□□ 0.46
PGBD1-201ENST00000259883 NCOA1Q15788 1441 aa17.91■□□□□ 0.46
PGBD1-201ENST00000259883 THOC2Q8NI27 1593 aaKnown RBP17.9■□□□□ 0.46
PGBD1-201ENST00000259883 RGL3Q3MIN7 710 aa17.9■□□□□ 0.46
PGBD1-201ENST00000259883 CARD11Q9BXL7 1154 aa17.9■□□□□ 0.46
PGBD1-201ENST00000259883 ANKRD30BQ9BXX2 1392 aa17.89■□□□□ 0.46
PGBD1-201ENST00000259883 DEKP35659 375 aaKnown RBP17.89■□□□□ 0.45
PGBD1-201ENST00000259883 NOP58Q9Y2X3 529 aaKnown RBP17.87■□□□□ 0.45
PGBD1-201ENST00000259883 USP47Q96K76 1375 aa17.87■□□□□ 0.45
PGBD1-201ENST00000259883 SKAP1Q86WV1 359 aa17.86■□□□□ 0.45
PGBD1-201ENST00000259883 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
PGBD1-201ENST00000259883 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
PGBD1-201ENST00000259883 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
PGBD1-201ENST00000259883 SAMD9Q5K651 1589 aa17.85■□□□□ 0.45
PGBD1-201ENST00000259883 DAPK1P53355 1430 aa17.84■□□□□ 0.45
PGBD1-201ENST00000259883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.84■□□□□ 0.45
PGBD1-201ENST00000259883 LAMC3Q9Y6N6 1575 aa17.84■□□□□ 0.45
PGBD1-201ENST00000259883 ABCC5O15440 1437 aa17.83■□□□□ 0.45
PGBD1-201ENST00000259883 PRG4Q92954 1404 aaPredicted RBP17.83■□□□□ 0.44
PGBD1-201ENST00000259883 ANP32AP39687 249 aaKnown RBP17.82■□□□□ 0.44
PGBD1-201ENST00000259883 RPRD2Q5VT52 1461 aaKnown RBP17.8■□□□□ 0.44
PGBD1-201ENST00000259883 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
PGBD1-201ENST00000259883 EXOC6Q8TAG9 804 aa17.8■□□□□ 0.44
PGBD1-201ENST00000259883 PLIN1O60240 522 aa17.79■□□□□ 0.44
PGBD1-201ENST00000259883 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
PGBD1-201ENST00000259883 NUP155O75694 1391 aa17.78■□□□□ 0.44
PGBD1-201ENST00000259883 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
PGBD1-201ENST00000259883 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
PGBD1-201ENST00000259883 HECW1Q76N89 1606 aa17.77■□□□□ 0.44
PGBD1-201ENST00000259883 HNRNPMP52272 730 aaKnown RBP eCLIP17.77■□□□□ 0.43
PGBD1-201ENST00000259883 ABCA5Q8WWZ7 1642 aa17.77■□□□□ 0.43
PGBD1-201ENST00000259883 ZBTB47Q9UFB7 747 aaPredicted RBP17.76■□□□□ 0.43
PGBD1-201ENST00000259883 PNISRQ8TF01 805 aaKnown RBP17.76■□□□□ 0.43
PGBD1-201ENST00000259883 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
PGBD1-201ENST00000259883 TEX14Q8IWB6 1497 aa17.76■□□□□ 0.43
PGBD1-201ENST00000259883 CDCA7LQ96GN5 454 aa17.75■□□□□ 0.43
PGBD1-201ENST00000259883 IQGAP2Q13576 1575 aa17.75■□□□□ 0.43
PGBD1-201ENST00000259883 ZNF608Q9ULD9 1512 aaPredicted RBP17.75■□□□□ 0.43
PGBD1-201ENST00000259883 DHX29Q7Z478 1369 aaKnown RBP17.74■□□□□ 0.43
PGBD1-201ENST00000259883 MIA2Q96PC5 1412 aa17.74■□□□□ 0.43
PGBD1-201ENST00000259883 RTL5Q5HYW3 569 aaPredicted RBP17.74■□□□□ 0.43
PGBD1-201ENST00000259883 ARHGEF11O15085 1522 aa17.73■□□□□ 0.43
PGBD1-201ENST00000259883 SPATA31E1Q6ZUB1 1445 aa17.72■□□□□ 0.43
PGBD1-201ENST00000259883 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
PGBD1-201ENST00000259883 RTN4Q9NQC3 1192 aaKnown RBP17.71■□□□□ 0.43
PGBD1-201ENST00000259883 TSPY4P0CV99 314 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 TSPY10P0CW01 314 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 KIF21AQ7Z4S6 1674 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 NBPF1Q3BBV0 1214 aa17.7■□□□□ 0.42
PGBD1-201ENST00000259883 PLB1Q6P1J6 1458 aa17.69■□□□□ 0.42
PGBD1-201ENST00000259883 SMG6Q86US8 1419 aaKnown RBP17.69■□□□□ 0.42
PGBD1-201ENST00000259883 IPO9Q96P70 1041 aaKnown RBP17.68■□□□□ 0.42
PGBD1-201ENST00000259883 WDR62O43379 1518 aa17.68■□□□□ 0.42
PGBD1-201ENST00000259883 RCAN3Q9UKA8 241 aa17.67■□□□□ 0.42
PGBD1-201ENST00000259883 PZPP20742 1482 aa17.67■□□□□ 0.42
PGBD1-201ENST00000259883 PLEKHD1A6NEE1 506 aa17.67■□□□□ 0.42
PGBD1-201ENST00000259883 NUP153P49790 1475 aaKnown RBP17.67■□□□□ 0.42
PGBD1-201ENST00000259883 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
PGBD1-201ENST00000259883 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
PGBD1-201ENST00000259883 KIAA1107Q9UPP5 1409 aa17.65■□□□□ 0.42
PGBD1-201ENST00000259883 ANKRD50Q9ULJ7 1429 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 ROCK1Q13464 1354 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 CAMSAP2Q08AD1 1489 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 ANKRD30AQ9BXX3 1397 aa17.64■□□□□ 0.41
PGBD1-201ENST00000259883 SLC4A3P48751 1232 aa17.63■□□□□ 0.41
PGBD1-201ENST00000259883 MYBBP1AQ9BQG0 1328 aaKnown RBP17.61■□□□□ 0.41
PGBD1-201ENST00000259883 JPH4Q96JJ6 628 aa17.61■□□□□ 0.41
PGBD1-201ENST00000259883 TARBP1Q13395 1621 aaKnown RBP17.6■□□□□ 0.41
PGBD1-201ENST00000259883 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
PGBD1-201ENST00000259883 PDE4AP27815 886 aa17.58■□□□□ 0.4
PGBD1-201ENST00000259883 DISP1Q96F81 1524 aa17.58■□□□□ 0.4
PGBD1-201ENST00000259883 NEFMP07197 916 aa17.58■□□□□ 0.4
PGBD1-201ENST00000259883 DNMT1P26358 1616 aaKnown RBP17.57■□□□□ 0.4
PGBD1-201ENST00000259883 TROQ12816 1431 aaPredicted RBP17.57■□□□□ 0.4
PGBD1-201ENST00000259883 CRBNQ96SW2 442 aa17.57■□□□□ 0.4
PGBD1-201ENST00000259883 PANK3Q9H999 370 aa17.56■□□□□ 0.4
PGBD1-201ENST00000259883 GPATCH8Q9UKJ3 1502 aaKnown RBP17.56■□□□□ 0.4
PGBD1-201ENST00000259883 PBRM1Q86U86 1689 aa17.56■□□□□ 0.4
PGBD1-201ENST00000259883 C20orf194Q5TEA3 1177 aa17.56■□□□□ 0.4
PGBD1-201ENST00000259883 ADAMTS12P58397 1594 aa17.55■□□□□ 0.4
PGBD1-201ENST00000259883 KIF14Q15058 1648 aa17.55■□□□□ 0.4
PGBD1-201ENST00000259883 NLRP13Q86W25 1043 aa17.54■□□□□ 0.4
PGBD1-201ENST00000259883 KTN1Q86UP2 1357 aaKnown RBP17.54■□□□□ 0.4
PGBD1-201ENST00000259883 RALBP1Q15311 655 aa17.53■□□□□ 0.4
PGBD1-201ENST00000259883 IL27Q8NEV9 243 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms