RNA–Protein interactions for RNA: ENST00000259241.6

HS6ST1-201, Transcript of heparan sulfate 6-O-sulfotransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HS6ST1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HS6ST1-201ENST00000259241 ZBTB47Q9UFB7 747 aaPredicted RBP17.06■□□□□ 0.32
HS6ST1-201ENST00000259241 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
HS6ST1-201ENST00000259241 PTPRGP23470 1445 aa17.05■□□□□ 0.32
HS6ST1-201ENST00000259241 TOPBP1Q92547 1522 aa17.05■□□□□ 0.32
HS6ST1-201ENST00000259241 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
HS6ST1-201ENST00000259241 TMF1P82094 1093 aa17.03■□□□□ 0.32
HS6ST1-201ENST00000259241 ROCK2O75116 1388 aaKnown RBP17.03■□□□□ 0.32
HS6ST1-201ENST00000259241 C14orf37Q86TY3 774 aa17.02■□□□□ 0.31
HS6ST1-201ENST00000259241 POGKQ9P215 609 aa17.02■□□□□ 0.31
HS6ST1-201ENST00000259241 PEG3Q9GZU2 1588 aa17.01■□□□□ 0.31
HS6ST1-201ENST00000259241 SOX12O15370 315 aa17.01■□□□□ 0.31
HS6ST1-201ENST00000259241 SPAG9O60271 1321 aaKnown RBP17■□□□□ 0.31
HS6ST1-201ENST00000259241 MYOM3Q5VTT5 1437 aa16.99■□□□□ 0.31
HS6ST1-201ENST00000259241 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
HS6ST1-201ENST00000259241 ERICH3Q5RHP9 1530 aa16.98■□□□□ 0.31
HS6ST1-201ENST00000259241 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
HS6ST1-201ENST00000259241 FRAT1Q92837 279 aaPredicted RBP16.97■□□□□ 0.31
HS6ST1-201ENST00000259241 CDCA8Q53HL2 280 aa16.96■□□□□ 0.31
HS6ST1-201ENST00000259241 CASKIN1Q8WXD9 1431 aa16.96■□□□□ 0.31
HS6ST1-201ENST00000259241 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
HS6ST1-201ENST00000259241 RRBP1Q9P2E9 1410 aaKnown RBP16.95■□□□□ 0.3
HS6ST1-201ENST00000259241 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
HS6ST1-201ENST00000259241 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.95■□□□□ 0.3
HS6ST1-201ENST00000259241 SRPK2P78362 688 aaKnown RBP16.94■□□□□ 0.3
HS6ST1-201ENST00000259241 PPP4R2Q9NY27 417 aa16.94■□□□□ 0.3
HS6ST1-201ENST00000259241 RGS3P49796 1198 aa16.94■□□□□ 0.3
HS6ST1-201ENST00000259241 PRKRIP1Q9H875 184 aaPredicted RBP16.93■□□□□ 0.3
HS6ST1-201ENST00000259241 AFAP1Q8N556 730 aa16.92■□□□□ 0.3
HS6ST1-201ENST00000259241 TRAK1Q9UPV9 953 aa16.91■□□□□ 0.3
HS6ST1-201ENST00000259241 KANK1Q14678 1352 aa16.91■□□□□ 0.3
HS6ST1-201ENST00000259241 PRG4Q92954 1404 aaPredicted RBP16.9■□□□□ 0.3
HS6ST1-201ENST00000259241 ARXQ96QS3 562 aa16.9■□□□□ 0.3
HS6ST1-201ENST00000259241 TRHP20396 242 aaPredicted RBP16.9■□□□□ 0.3
HS6ST1-201ENST00000259241 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
HS6ST1-201ENST00000259241 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
HS6ST1-201ENST00000259241 GRIN2BQ13224 1484 aa16.88■□□□□ 0.29
HS6ST1-201ENST00000259241 WASHC2AQ641Q2 1341 aa16.88■□□□□ 0.29
HS6ST1-201ENST00000259241 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
HS6ST1-201ENST00000259241 MORC1Q86VD1 984 aa16.87■□□□□ 0.29
HS6ST1-201ENST00000259241 PRDM2Q13029 1718 aa16.87■□□□□ 0.29
HS6ST1-201ENST00000259241 PANK3Q9H999 370 aa16.87■□□□□ 0.29
HS6ST1-201ENST00000259241 UACAQ9BZF9 1416 aa16.86■□□□□ 0.29
HS6ST1-201ENST00000259241 NUTM2FA1L443 756 aa16.86■□□□□ 0.29
HS6ST1-201ENST00000259241 USP47Q96K76 1375 aa16.86■□□□□ 0.29
HS6ST1-201ENST00000259241 WASHC2CQ9Y4E1 1318 aa16.86■□□□□ 0.29
HS6ST1-201ENST00000259241 RBM19Q9Y4C8 960 aaKnown RBP16.86■□□□□ 0.29
HS6ST1-201ENST00000259241 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
HS6ST1-201ENST00000259241 KTN1Q86UP2 1357 aaKnown RBP16.84■□□□□ 0.29
HS6ST1-201ENST00000259241 KIF15Q9NS87 1388 aa16.84■□□□□ 0.29
HS6ST1-201ENST00000259241 TSHZ2Q9NRE2 1034 aa16.84■□□□□ 0.29
HS6ST1-201ENST00000259241 KIF7Q2M1P5 1343 aa16.84■□□□□ 0.29
HS6ST1-201ENST00000259241 CCDC144AA2RUR9 1427 aa16.83■□□□□ 0.28
HS6ST1-201ENST00000259241 CCDC184Q52MB2 194 aa16.83■□□□□ 0.28
HS6ST1-201ENST00000259241 CDK13Q14004 1512 aaKnown RBP16.82■□□□□ 0.28
HS6ST1-201ENST00000259241 RSPH4AQ5TD94 716 aa16.82■□□□□ 0.28
HS6ST1-201ENST00000259241 FYCO1Q9BQS8 1478 aa16.81■□□□□ 0.28
HS6ST1-201ENST00000259241 NBPF1Q3BBV0 1214 aa16.81■□□□□ 0.28
HS6ST1-201ENST00000259241 TIAM1Q13009 1591 aa16.81■□□□□ 0.28
HS6ST1-201ENST00000259241 SNAPC4Q5SXM2 1469 aa16.8■□□□□ 0.28
HS6ST1-201ENST00000259241 ANKRD50Q9ULJ7 1429 aa16.8■□□□□ 0.28
HS6ST1-201ENST00000259241 PLIN1O60240 522 aa16.79■□□□□ 0.28
HS6ST1-201ENST00000259241 HSP90AA1P07900 732 aaKnown RBP16.79■□□□□ 0.28
HS6ST1-201ENST00000259241 RCAN3Q9UKA8 241 aa16.79■□□□□ 0.28
HS6ST1-201ENST00000259241 MAPK8IP3Q9UPT6 1336 aa16.79■□□□□ 0.28
HS6ST1-201ENST00000259241 RRP7AQ9Y3A4 280 aaKnown RBP16.78■□□□□ 0.28
HS6ST1-201ENST00000259241 U2AF1L5P0DN76 240 aaPredicted RBP16.78■□□□□ 0.28
HS6ST1-201ENST00000259241 U2AF1Q01081 240 aaKnown RBP eCLIP16.78■□□□□ 0.28
HS6ST1-201ENST00000259241 DNMBPQ6XZF7 1577 aa16.78■□□□□ 0.28
HS6ST1-201ENST00000259241 UPF2Q9HAU5 1272 aaKnown RBP16.77■□□□□ 0.28
HS6ST1-201ENST00000259241 MRC2Q9UBG0 1479 aa16.77■□□□□ 0.28
HS6ST1-201ENST00000259241 URB2Q14146 1524 aaKnown RBP16.77■□□□□ 0.28
HS6ST1-201ENST00000259241 NLRP13Q86W25 1043 aa16.77■□□□□ 0.27
HS6ST1-201ENST00000259241 ABCA10Q8WWZ4 1543 aa16.77■□□□□ 0.27
HS6ST1-201ENST00000259241 ZNF608Q9ULD9 1512 aaPredicted RBP16.77■□□□□ 0.27
HS6ST1-201ENST00000259241 A0A0G2JS52 829 aa16.76■□□□□ 0.27
HS6ST1-201ENST00000259241 FTSJ3Q8IY81 847 aaKnown RBP16.76■□□□□ 0.27
HS6ST1-201ENST00000259241 OSCARQ8IYS5 282 aa16.76■□□□□ 0.27
HS6ST1-201ENST00000259241 RALBP1Q15311 655 aa16.76■□□□□ 0.27
HS6ST1-201ENST00000259241 NUDCQ9Y266 331 aa16.75■□□□□ 0.27
HS6ST1-201ENST00000259241 CCDC7Q96M83 1385 aa16.74■□□□□ 0.27
HS6ST1-201ENST00000259241 WDR97A6NE52 1622 aa16.74■□□□□ 0.27
HS6ST1-201ENST00000259241 C11orf95C9JLR9 678 aaPredicted RBP16.73■□□□□ 0.27
HS6ST1-201ENST00000259241 TMEM132EQ6IEE7 984 aa16.73■□□□□ 0.27
HS6ST1-201ENST00000259241 PCF11O94913 1555 aaKnown RBP16.73■□□□□ 0.27
HS6ST1-201ENST00000259241 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
HS6ST1-201ENST00000259241 NAIPQ13075 1403 aa16.72■□□□□ 0.27
HS6ST1-201ENST00000259241 LAMC3Q9Y6N6 1575 aa16.72■□□□□ 0.27
HS6ST1-201ENST00000259241 PLB1Q6P1J6 1458 aa16.71■□□□□ 0.27
HS6ST1-201ENST00000259241 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.71■□□□□ 0.276e-6■□□□□ 8.8
HS6ST1-201ENST00000259241 BCL2L13Q9BXK5 485 aa16.7■□□□□ 0.26
HS6ST1-201ENST00000259241 HFM1A2PYH4 1435 aa16.69■□□□□ 0.26
HS6ST1-201ENST00000259241 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
HS6ST1-201ENST00000259241 CFAP70Q5T0N1 1121 aa16.68■□□□□ 0.26
HS6ST1-201ENST00000259241 IFT140Q96RY7 1462 aa16.67■□□□□ 0.26
HS6ST1-201ENST00000259241 EPRSP07814 1512 aaKnown RBP16.67■□□□□ 0.26
HS6ST1-201ENST00000259241 MINK1Q8N4C8 1332 aaPredicted RBP16.67■□□□□ 0.26
HS6ST1-201ENST00000259241 MYBBP1AQ9BQG0 1328 aaKnown RBP16.66■□□□□ 0.26
HS6ST1-201ENST00000259241 EFCAB5A4FU69 1503 aa16.65■□□□□ 0.26
HS6ST1-201ENST00000259241 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
HS6ST1-201ENST00000259241 EXOC6Q8TAG9 804 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms