RNA–Protein interactions for RNA: ENST00000256443.7

CDK7-201, Transcript of cyclin dependent kinase 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK7, Length 1,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-201ENST00000256443 CDC42BPAQ5VT25 1732 aa20.44■□□□□ 0.86
CDK7-201ENST00000256443 ADGRL1O94910 1474 aa20.44■□□□□ 0.86
CDK7-201ENST00000256443 RICTORQ6R327 1708 aa20.44■□□□□ 0.86
CDK7-201ENST00000256443 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
CDK7-201ENST00000256443 MAP3K1Q13233 1512 aa20.41■□□□□ 0.86
CDK7-201ENST00000256443 RAPGEF3O95398 923 aa20.41■□□□□ 0.86
CDK7-201ENST00000256443 SCAPERQ9BY12 1400 aa20.4■□□□□ 0.86
CDK7-201ENST00000256443 SUPT6HQ7KZ85 1726 aaKnown RBP20.38■□□□□ 0.85
CDK7-201ENST00000256443 ZMYM4Q5VZL5 1548 aa20.37■□□□□ 0.85
CDK7-201ENST00000256443 GPATCH8Q9UKJ3 1502 aaKnown RBP20.37■□□□□ 0.85
CDK7-201ENST00000256443 CCNB3Q8WWL7 1395 aa20.37■□□□□ 0.85
CDK7-201ENST00000256443 POGZQ7Z3K3 1410 aa20.37■□□□□ 0.85
CDK7-201ENST00000256443 ITSN2Q9NZM3 1697 aa20.36■□□□□ 0.85
CDK7-201ENST00000256443 LRRC9Q6ZRR7 1453 aa20.34■□□□□ 0.85
CDK7-201ENST00000256443 MAGI2Q86UL8 1455 aa20.34■□□□□ 0.85
CDK7-201ENST00000256443 ZNF518AQ6AHZ1 1483 aa20.33■□□□□ 0.85
CDK7-201ENST00000256443 ABCC1P33527 1531 aa20.33■□□□□ 0.85
CDK7-201ENST00000256443 APLP2Q06481 763 aa20.32■□□□□ 0.84
CDK7-201ENST00000256443 ARHGEF40Q8TER5 1519 aa20.32■□□□□ 0.84
CDK7-201ENST00000256443 NCOA2Q15596 1464 aa20.31■□□□□ 0.84
CDK7-201ENST00000256443 CFDP1Q9UEE9 299 aaPredicted RBP20.3■□□□□ 0.84
CDK7-201ENST00000256443 KDM5CP41229 1560 aa20.3■□□□□ 0.84
CDK7-201ENST00000256443 SAMD9LQ8IVG5 1584 aa20.3■□□□□ 0.84
CDK7-201ENST00000256443 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
CDK7-201ENST00000256443 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
CDK7-201ENST00000256443 ZNF777Q9ULD5 760 aaPredicted RBP20.27■□□□□ 0.83
CDK7-201ENST00000256443 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
CDK7-201ENST00000256443 ARHGEF12Q9NZN5 1544 aa20.25■□□□□ 0.83
CDK7-201ENST00000256443 HECW2Q9P2P5 1572 aa20.24■□□□□ 0.83
CDK7-201ENST00000256443 SYCP2Q9BX26 1530 aa20.24■□□□□ 0.83
CDK7-201ENST00000256443 KDM4FA0A1W2PPD8 638 aa20.24■□□□□ 0.83
CDK7-201ENST00000256443 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
CDK7-201ENST00000256443 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
CDK7-201ENST00000256443 YEATS2Q9ULM3 1422 aa20.22■□□□□ 0.83
CDK7-201ENST00000256443 TRAPPC8Q9Y2L5 1435 aa20.22■□□□□ 0.83
CDK7-201ENST00000256443 MLH3Q9UHC1 1453 aa20.22■□□□□ 0.83
CDK7-201ENST00000256443 ATP10AO60312 1499 aa20.19■□□□□ 0.82
CDK7-201ENST00000256443 MYT1LQ9UL68 1186 aa20.18■□□□□ 0.82
CDK7-201ENST00000256443 C9orf84Q5VXU9 1444 aa20.17■□□□□ 0.82
CDK7-201ENST00000256443 BCORL1Q5H9F3 1711 aa20.17■□□□□ 0.82
CDK7-201ENST00000256443 HNRNPMP52272 730 aaKnown RBP eCLIP20.17■□□□□ 0.822e-9■■■■■ 32.2
CDK7-201ENST00000256443 ARID4BQ4LE39 1312 aaPredicted RBP20.16■□□□□ 0.82
CDK7-201ENST00000256443 MYOM3Q5VTT5 1437 aa20.16■□□□□ 0.82
CDK7-201ENST00000256443 DIP2CQ9Y2E4 1556 aa20.16■□□□□ 0.82
CDK7-201ENST00000256443 CAMSAP2Q08AD1 1489 aa20.16■□□□□ 0.82
CDK7-201ENST00000256443 KIDINS220Q9ULH0 1771 aa20.16■□□□□ 0.82
CDK7-201ENST00000256443 REREQ9P2R6 1566 aa20.15■□□□□ 0.82
CDK7-201ENST00000256443 MIA2Q96PC5 1412 aa20.15■□□□□ 0.82
CDK7-201ENST00000256443 ABCA6Q8N139 1617 aa20.15■□□□□ 0.82
CDK7-201ENST00000256443 MBD5Q9P267 1494 aa20.14■□□□□ 0.81
CDK7-201ENST00000256443 ZNF644Q9H582 1327 aaPredicted RBP20.14■□□□□ 0.81
CDK7-201ENST00000256443 ADAMTSL3P82987 1691 aa20.13■□□□□ 0.81
CDK7-201ENST00000256443 SPAG9O60271 1321 aaKnown RBP20.13■□□□□ 0.81
CDK7-201ENST00000256443 RSPH4AQ5TD94 716 aa20.12■□□□□ 0.81
CDK7-201ENST00000256443 INO80Q9ULG1 1556 aaPredicted RBP20.12■□□□□ 0.81
CDK7-201ENST00000256443 SIGLEC1Q9BZZ2 1709 aa20.12■□□□□ 0.81
CDK7-201ENST00000256443 ATP7AQ04656 1500 aa20.12■□□□□ 0.81
CDK7-201ENST00000256443 CCDC141Q6ZP82 1450 aa20.1■□□□□ 0.81
CDK7-201ENST00000256443 ARHGEF5Q12774 1597 aa20.1■□□□□ 0.81
CDK7-201ENST00000256443 RTEL1-TNFRSF6BF6WH68 1400 aa20.07■□□□□ 0.8
CDK7-201ENST00000256443 MADDQ8WXG6 1647 aa20.06■□□□□ 0.8
CDK7-201ENST00000256443 AGLP35573 1532 aa20.06■□□□□ 0.8
CDK7-201ENST00000256443 ADGBQ8N7X0 1667 aa20.05■□□□□ 0.8
CDK7-201ENST00000256443 PTPN23Q9H3S7 1636 aa20.04■□□□□ 0.8
CDK7-201ENST00000256443 FER1L4A9Z1Z3 1794 aa20.03■□□□□ 0.8
CDK7-201ENST00000256443 FGD6Q6ZV73 1430 aa20.02■□□□□ 0.8
CDK7-201ENST00000256443 RIMS1Q86UR5 1692 aaKnown RBP20.02■□□□□ 0.79
CDK7-201ENST00000256443 TSPY4P0CV99 314 aa20.02■□□□□ 0.79
CDK7-201ENST00000256443 TSPY10P0CW01 314 aa20.02■□□□□ 0.79
CDK7-201ENST00000256443 PTPRMP28827 1452 aa20.01■□□□□ 0.79
CDK7-201ENST00000256443 A2MP01023 1474 aa20■□□□□ 0.79
CDK7-201ENST00000256443 TCOF1Q13428 1488 aaKnown RBP20■□□□□ 0.79
CDK7-201ENST00000256443 PLXNC1O60486 1568 aa20■□□□□ 0.79
CDK7-201ENST00000256443 MAST1Q9Y2H9 1570 aa20■□□□□ 0.79
CDK7-201ENST00000256443 MLECQ14165 292 aa20■□□□□ 0.79
CDK7-201ENST00000256443 CROCC2H7BZ55 1655 aa19.96■□□□□ 0.79
CDK7-201ENST00000256443 DNMT1P26358 1616 aaKnown RBP19.94■□□□□ 0.78
CDK7-201ENST00000256443 SHANK2Q9UPX8 1470 aa19.94■□□□□ 0.78
CDK7-201ENST00000256443 DHX29Q7Z478 1369 aaKnown RBP19.94■□□□□ 0.78
CDK7-201ENST00000256443 DAPK1P53355 1430 aa19.91■□□□□ 0.78
CDK7-201ENST00000256443 ABCC5O15440 1437 aa19.9■□□□□ 0.78
CDK7-201ENST00000256443 ESF1Q9H501 851 aaKnown RBP19.9■□□□□ 0.78
CDK7-201ENST00000256443 CNTLNQ9NXG0 1405 aa19.89■□□□□ 0.78
CDK7-201ENST00000256443 MROH2AA6NES4 1674 aa19.87■□□□□ 0.77
CDK7-201ENST00000256443 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
CDK7-201ENST00000256443 FAM50AQ14320 339 aaKnown RBP19.85■□□□□ 0.77
CDK7-201ENST00000256443 EIF2AK4Q9P2K8 1649 aaKnown RBP19.85■□□□□ 0.77
CDK7-201ENST00000256443 DUOX2Q9NRD8 1548 aa19.85■□□□□ 0.77
CDK7-201ENST00000256443 GGT6Q6P531 493 aa19.84■□□□□ 0.77
CDK7-201ENST00000256443 C3P01024 1663 aa19.83■□□□□ 0.77
CDK7-201ENST00000256443 FAM135AQ9P2D6 1515 aa19.83■□□□□ 0.77
CDK7-201ENST00000256443 KIF3BO15066 747 aa19.83■□□□□ 0.76
CDK7-201ENST00000256443 PPARGC1BQ86YN6 1023 aaKnown RBP19.83■□□□□ 0.76
CDK7-201ENST00000256443 CLTCQ00610 1675 aaKnown RBP19.82■□□□□ 0.76
CDK7-201ENST00000256443 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
CDK7-201ENST00000256443 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDK7-201ENST00000256443 KIF15Q9NS87 1388 aa19.8■□□□□ 0.76
CDK7-201ENST00000256443 SETD1BQ9UPS6 1966 aaKnown RBP19.8■□□□□ 0.76
CDK7-201ENST00000256443 RNF17Q9BXT8 1623 aaKnown RBP19.8■□□□□ 0.76
CDK7-201ENST00000256443 ADGRL2O95490 1459 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms