RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 POGZQ7Z3K3 1410 aa21.45■■□□□ 1.02
MRPL35-201ENST00000254644 SCAPERQ9BY12 1400 aa21.45■■□□□ 1.02
MRPL35-201ENST00000254644 YEATS2Q9ULM3 1422 aa21.45■■□□□ 1.02
MRPL35-201ENST00000254644 ARID4BQ4LE39 1312 aaPredicted RBP21.42■■□□□ 1.02
MRPL35-201ENST00000254644 RIMS1Q86UR5 1692 aaKnown RBP21.42■■□□□ 1.02
MRPL35-201ENST00000254644 CDC42BPBQ9Y5S2 1711 aa21.41■■□□□ 1.02
MRPL35-201ENST00000254644 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
MRPL35-201ENST00000254644 CASKIN1Q8WXD9 1431 aa21.4■■□□□ 1.02
MRPL35-201ENST00000254644 PCF11O94913 1555 aaKnown RBP21.4■■□□□ 1.02
MRPL35-201ENST00000254644 ILDR1Q86SU0 546 aaPredicted RBP21.38■■□□□ 1.01
MRPL35-201ENST00000254644 CLIP1P30622 1438 aa21.38■■□□□ 1.01
MRPL35-201ENST00000254644 CCDC18Q5T9S5 1454 aa21.36■■□□□ 1.01
MRPL35-201ENST00000254644 KDM5CP41229 1560 aa21.36■■□□□ 1.01
MRPL35-201ENST00000254644 ARHGAP5Q13017 1502 aa21.34■■□□□ 1.01
MRPL35-201ENST00000254644 ATP10AO60312 1499 aa21.34■■□□□ 1.01
MRPL35-201ENST00000254644 FER1L4A9Z1Z3 1794 aa21.33■■□□□ 1.01
MRPL35-201ENST00000254644 PREX2Q70Z35 1606 aa21.33■■□□□ 1.01
MRPL35-201ENST00000254644 ZNF518AQ6AHZ1 1483 aa21.33■■□□□ 1.01
MRPL35-201ENST00000254644 LMTK3Q96Q04 1460 aa21.33■■□□□ 1.01
MRPL35-201ENST00000254644 CDC42BPAQ5VT25 1732 aa21.31■■□□□ 1
MRPL35-201ENST00000254644 FYCO1Q9BQS8 1478 aa21.31■■□□□ 1
MRPL35-201ENST00000254644 C9orf84Q5VXU9 1444 aa21.3■■□□□ 1
MRPL35-201ENST00000254644 ARHGEF12Q9NZN5 1544 aa21.3■■□□□ 1
MRPL35-201ENST00000254644 AFAP1Q8N556 730 aa21.28■■□□□ 1
MRPL35-201ENST00000254644 ITSN2Q9NZM3 1697 aa21.27■■□□□ 1
MRPL35-201ENST00000254644 REREQ9P2R6 1566 aa21.27■□□□□ 0.99
MRPL35-201ENST00000254644 ABCC1P33527 1531 aa21.26■□□□□ 0.99
MRPL35-201ENST00000254644 DIP2CQ9Y2E4 1556 aa21.26■□□□□ 0.99
MRPL35-201ENST00000254644 MLH3Q9UHC1 1453 aa21.26■□□□□ 0.99
MRPL35-201ENST00000254644 ABCA6Q8N139 1617 aa21.23■□□□□ 0.99
MRPL35-201ENST00000254644 TRAPPC8Q9Y2L5 1435 aa21.22■□□□□ 0.99
MRPL35-201ENST00000254644 MLECQ14165 292 aa21.22■□□□□ 0.99
MRPL35-201ENST00000254644 SETD1BQ9UPS6 1966 aaKnown RBP21.22■□□□□ 0.99
MRPL35-201ENST00000254644 KIDINS220Q9ULH0 1771 aa21.21■□□□□ 0.99
MRPL35-201ENST00000254644 AGLP35573 1532 aa21.18■□□□□ 0.98
MRPL35-201ENST00000254644 GPATCH8Q9UKJ3 1502 aaKnown RBP21.18■□□□□ 0.98
MRPL35-201ENST00000254644 SAMD9LQ8IVG5 1584 aa21.17■□□□□ 0.98
MRPL35-201ENST00000254644 PREX1Q8TCU6 1659 aa21.16■□□□□ 0.98
MRPL35-201ENST00000254644 HSPA2P54652 639 aa21.14■□□□□ 0.97
MRPL35-201ENST00000254644 PLPPR3Q6T4P5 718 aa21.12■□□□□ 0.97
MRPL35-201ENST00000254644 C3P01024 1663 aa21.1■□□□□ 0.97
MRPL35-201ENST00000254644 CEBPAP49715 358 aaPredicted RBP21.1■□□□□ 0.97
MRPL35-201ENST00000254644 MYT1LQ9UL68 1186 aa21.1■□□□□ 0.97
MRPL35-201ENST00000254644 SYCP2Q9BX26 1530 aa21.09■□□□□ 0.97
MRPL35-201ENST00000254644 FBXO41Q8TF61 875 aa21.09■□□□□ 0.97
MRPL35-201ENST00000254644 KIAA1107Q9UPP5 1409 aa21.09■□□□□ 0.97
MRPL35-201ENST00000254644 STRCQ7RTU9 1775 aa21.05■□□□□ 0.96
MRPL35-201ENST00000254644 ZNF777Q9ULD5 760 aaPredicted RBP21.05■□□□□ 0.96
MRPL35-201ENST00000254644 PLEKHH2Q8IVE3 1493 aa21.05■□□□□ 0.96
MRPL35-201ENST00000254644 INO80Q9ULG1 1556 aaPredicted RBP21.05■□□□□ 0.96
MRPL35-201ENST00000254644 HNRNPMP52272 730 aaKnown RBP eCLIP21.04■□□□□ 0.96
MRPL35-201ENST00000254644 MTUS2Q5JR59 1369 aa21.04■□□□□ 0.96
MRPL35-201ENST00000254644 CCNB3Q8WWL7 1395 aa21.04■□□□□ 0.96
MRPL35-201ENST00000254644 CEP162Q5TB80 1403 aa21.04■□□□□ 0.96
MRPL35-201ENST00000254644 TIAM1Q13009 1591 aa21.03■□□□□ 0.96
MRPL35-201ENST00000254644 CFDP1Q9UEE9 299 aaPredicted RBP21.03■□□□□ 0.96
MRPL35-201ENST00000254644 ATP7AQ04656 1500 aa21.03■□□□□ 0.96
MRPL35-201ENST00000254644 EHBP1L1Q8N3D4 1523 aa21.03■□□□□ 0.96
MRPL35-201ENST00000254644 MROH2AA6NES4 1674 aa21.02■□□□□ 0.95
MRPL35-201ENST00000254644 SPAG9O60271 1321 aaKnown RBP21.02■□□□□ 0.95
MRPL35-201ENST00000254644 PLXNC1O60486 1568 aa21.02■□□□□ 0.95
MRPL35-201ENST00000254644 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
MRPL35-201ENST00000254644 CNTLNQ9NXG0 1405 aa21■□□□□ 0.95
MRPL35-201ENST00000254644 UHRF1BP1Q6BDS2 1440 aa20.99■□□□□ 0.95
MRPL35-201ENST00000254644 MBD5Q9P267 1494 aa20.98■□□□□ 0.95
MRPL35-201ENST00000254644 ADGBQ8N7X0 1667 aa20.96■□□□□ 0.95
MRPL35-201ENST00000254644 A2MP01023 1474 aa20.95■□□□□ 0.94
MRPL35-201ENST00000254644 ESF1Q9H501 851 aaKnown RBP20.94■□□□□ 0.94
MRPL35-201ENST00000254644 ZNF644Q9H582 1327 aaPredicted RBP20.94■□□□□ 0.94
MRPL35-201ENST00000254644 NPATQ14207 1427 aa20.92■□□□□ 0.94
MRPL35-201ENST00000254644 CLTCQ00610 1675 aaKnown RBP20.92■□□□□ 0.94
MRPL35-201ENST00000254644 RTEL1-TNFRSF6BF6WH68 1400 aa20.91■□□□□ 0.94
MRPL35-201ENST00000254644 ZMYM3Q14202 1370 aa20.91■□□□□ 0.94
MRPL35-201ENST00000254644 CERKQ8TCT0 537 aa20.9■□□□□ 0.94
MRPL35-201ENST00000254644 DMRT2Q9Y5R5 561 aa20.9■□□□□ 0.94
MRPL35-201ENST00000254644 NCOA2Q15596 1464 aa20.89■□□□□ 0.94
MRPL35-201ENST00000254644 PTPRTO14522 1441 aa20.87■□□□□ 0.93
MRPL35-201ENST00000254644 PPP6R1Q9UPN7 881 aa20.86■□□□□ 0.93
MRPL35-201ENST00000254644 VPS8Q8N3P4 1428 aa20.85■□□□□ 0.93
MRPL35-201ENST00000254644 ZNF142P52746 1687 aaPredicted RBP20.83■□□□□ 0.93
MRPL35-201ENST00000254644 CAMSAP2Q08AD1 1489 aa20.83■□□□□ 0.93
MRPL35-201ENST00000254644 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
MRPL35-201ENST00000254644 RSPH4AQ5TD94 716 aa20.83■□□□□ 0.93
MRPL35-201ENST00000254644 PTPRKQ15262 1439 aa20.83■□□□□ 0.93
MRPL35-201ENST00000254644 NCOA1Q15788 1441 aa20.83■□□□□ 0.93
MRPL35-201ENST00000254644 DHX29Q7Z478 1369 aaKnown RBP20.83■□□□□ 0.92
MRPL35-201ENST00000254644 CCDC141Q6ZP82 1450 aa20.82■□□□□ 0.92
MRPL35-201ENST00000254644 LRRC9Q6ZRR7 1453 aa20.81■□□□□ 0.92
MRPL35-201ENST00000254644 ARHGEF5Q12774 1597 aa20.81■□□□□ 0.92
MRPL35-201ENST00000254644 GGT6Q6P531 493 aa20.81■□□□□ 0.92
MRPL35-201ENST00000254644 MYO3AQ8NEV4 1616 aa20.81■□□□□ 0.92
MRPL35-201ENST00000254644 MAP3K1Q13233 1512 aa20.8■□□□□ 0.92
MRPL35-201ENST00000254644 CAMSAP1Q5T5Y3 1602 aa20.8■□□□□ 0.92
MRPL35-201ENST00000254644 LTBP4Q8N2S1 1624 aa20.77■□□□□ 0.92
MRPL35-201ENST00000254644 CEP170BQ9Y4F5 1589 aaPredicted RBP20.76■□□□□ 0.91
MRPL35-201ENST00000254644 FAM135AQ9P2D6 1515 aa20.75■□□□□ 0.91
MRPL35-201ENST00000254644 PLA2R1Q13018 1463 aa20.75■□□□□ 0.91
MRPL35-201ENST00000254644 MAST1Q9Y2H9 1570 aa20.72■□□□□ 0.91
MRPL35-201ENST00000254644 KANK4Q5T7N3 995 aaPredicted RBP20.72■□□□□ 0.91
MRPL35-201ENST00000254644 TCOF1Q13428 1488 aaKnown RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms