RNA–Protein interactions for RNA: ENST00000246529.3

LRFN3-201, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN3, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-201ENST00000246529 KDM5BQ9UGL1 1544 aa24.7■■□□□ 1.54
LRFN3-201ENST00000246529 MPHOSPH9Q99550 1183 aa24.7■■□□□ 1.54
LRFN3-201ENST00000246529 ABCC5O15440 1437 aa24.69■■□□□ 1.54
LRFN3-201ENST00000246529 NUP160Q12769 1436 aa24.65■■□□□ 1.54
LRFN3-201ENST00000246529 TROQ12816 1431 aaPredicted RBP24.65■■□□□ 1.54
LRFN3-201ENST00000246529 DNMT1P26358 1616 aaKnown RBP24.62■■□□□ 1.53
LRFN3-201ENST00000246529 CARMIL2Q6F5E8 1435 aa24.62■■□□□ 1.53
LRFN3-201ENST00000246529 CFDP1Q9UEE9 299 aaPredicted RBP24.61■■□□□ 1.53
LRFN3-201ENST00000246529 ROCK1Q13464 1354 aa24.61■■□□□ 1.53
LRFN3-201ENST00000246529 ZNF777Q9ULD5 760 aaPredicted RBP24.61■■□□□ 1.53
LRFN3-201ENST00000246529 KIF14Q15058 1648 aa24.58■■□□□ 1.53
LRFN3-201ENST00000246529 CAMSAP2Q08AD1 1489 aa24.57■■□□□ 1.52
LRFN3-201ENST00000246529 GPATCH8Q9UKJ3 1502 aaKnown RBP24.56■■□□□ 1.52
LRFN3-201ENST00000246529 L3MBTL2Q969R5 705 aa24.54■■□□□ 1.52
LRFN3-201ENST00000246529 ANP32CO43423 234 aa24.53■■□□□ 1.52
LRFN3-201ENST00000246529 SLC4A1APQ9BWU0 796 aaKnown RBP24.51■■□□□ 1.51
LRFN3-201ENST00000246529 HSPA5P11021 654 aaKnown RBP24.51■■□□□ 1.51
LRFN3-201ENST00000246529 ANKRD30BQ9BXX2 1392 aa24.5■■□□□ 1.51
LRFN3-201ENST00000246529 PLEKHD1A6NEE1 506 aa24.47■■□□□ 1.51
LRFN3-201ENST00000246529 ABCA8O94911 1581 aa24.47■■□□□ 1.51
LRFN3-201ENST00000246529 ATP10BO94823 1461 aa24.46■■□□□ 1.51
LRFN3-201ENST00000246529 ADCY10Q96PN6 1610 aa24.46■■□□□ 1.51
LRFN3-201ENST00000246529 ITSN2Q9NZM3 1697 aa24.46■■□□□ 1.51
LRFN3-201ENST00000246529 NCOA1Q15788 1441 aa24.46■■□□□ 1.51
LRFN3-201ENST00000246529 SUPT16HQ9Y5B9 1047 aaKnown RBP24.45■■□□□ 1.51
LRFN3-201ENST00000246529 CCER2I3L3R5 266 aa24.43■■□□□ 1.5
LRFN3-201ENST00000246529 WASHC2AQ641Q2 1341 aa24.43■■□□□ 1.5
LRFN3-201ENST00000246529 RPRD2Q5VT52 1461 aaKnown RBP24.43■■□□□ 1.5
LRFN3-201ENST00000246529 NBPF8Q3BBV2 869 aa24.41■■□□□ 1.5
LRFN3-201ENST00000246529 PZPP20742 1482 aa24.41■■□□□ 1.5
LRFN3-201ENST00000246529 EIF4G2P78344 907 aaKnown RBP eCLIP24.41■■□□□ 1.5
LRFN3-201ENST00000246529 ABCC10Q5T3U5 1492 aa24.38■■□□□ 1.49
LRFN3-201ENST00000246529 TEX14Q8IWB6 1497 aa24.38■■□□□ 1.49
LRFN3-201ENST00000246529 PTPRGP23470 1445 aa24.37■■□□□ 1.49
LRFN3-201ENST00000246529 ADGRL2O95490 1459 aa24.36■■□□□ 1.49
LRFN3-201ENST00000246529 ADGBQ8N7X0 1667 aa24.36■■□□□ 1.49
LRFN3-201ENST00000246529 ANKRD30AQ9BXX3 1397 aa24.35■■□□□ 1.49
LRFN3-201ENST00000246529 CROCC2H7BZ55 1655 aa24.35■■□□□ 1.49
LRFN3-201ENST00000246529 CDC42BPAQ5VT25 1732 aa24.35■■□□□ 1.49
LRFN3-201ENST00000246529 C11orf95C9JLR9 678 aaPredicted RBP24.34■■□□□ 1.49
LRFN3-201ENST00000246529 PKD2Q13563 968 aa24.31■■□□□ 1.48
LRFN3-201ENST00000246529 HNRNPMP52272 730 aaKnown RBP eCLIP24.31■■□□□ 1.48
LRFN3-201ENST00000246529 ANKRD50Q9ULJ7 1429 aa24.31■■□□□ 1.48
LRFN3-201ENST00000246529 C9orf84Q5VXU9 1444 aa24.29■■□□□ 1.48
LRFN3-201ENST00000246529 KIAA1107Q9UPP5 1409 aa24.28■■□□□ 1.48
LRFN3-201ENST00000246529 CHD1O14646 1710 aa24.26■■□□□ 1.47
LRFN3-201ENST00000246529 TSPY4P0CV99 314 aa24.25■■□□□ 1.47
LRFN3-201ENST00000246529 TSPY10P0CW01 314 aa24.25■■□□□ 1.47
LRFN3-201ENST00000246529 NUP155O75694 1391 aa24.23■■□□□ 1.47
LRFN3-201ENST00000246529 CCDC7Q96M83 1385 aa24.23■■□□□ 1.47
LRFN3-201ENST00000246529 ZNF326Q5BKZ1 582 aaKnown RBP24.22■■□□□ 1.47
LRFN3-201ENST00000246529 SHANK2Q9UPX8 1470 aa24.22■■□□□ 1.47
LRFN3-201ENST00000246529 CNTLNQ9NXG0 1405 aa24.21■■□□□ 1.47
LRFN3-201ENST00000246529 SPATA31E1Q6ZUB1 1445 aa24.19■■□□□ 1.46
LRFN3-201ENST00000246529 KIF15Q9NS87 1388 aa24.19■■□□□ 1.46
LRFN3-201ENST00000246529 MBD5Q9P267 1494 aa24.19■■□□□ 1.46
LRFN3-201ENST00000246529 ERCC6L2Q5T890 1561 aa24.18■■□□□ 1.46
LRFN3-201ENST00000246529 BCANQ96GW7 911 aa24.18■■□□□ 1.46
LRFN3-201ENST00000246529 FKBP8Q14318 412 aa24.16■■□□□ 1.46
LRFN3-201ENST00000246529 KIF7Q2M1P5 1343 aa24.16■■□□□ 1.46
LRFN3-201ENST00000246529 SAMD9LQ8IVG5 1584 aa24.15■■□□□ 1.46
LRFN3-201ENST00000246529 CCDC184Q52MB2 194 aa24.15■■□□□ 1.46
LRFN3-201ENST00000246529 CDC42BPBQ9Y5S2 1711 aa24.12■■□□□ 1.45
LRFN3-201ENST00000246529 ARHGEF5Q12774 1597 aa24.12■■□□□ 1.45
LRFN3-201ENST00000246529 HNRNPUQ00839 825 aaKnown RBP eCLIP24.12■■□□□ 1.45
LRFN3-201ENST00000246529 SHROOM2Q13796 1616 aa24.11■■□□□ 1.45
LRFN3-201ENST00000246529 CCDC141Q6ZP82 1450 aa24.11■■□□□ 1.45
LRFN3-201ENST00000246529 PREX2Q70Z35 1606 aa24.1■■□□□ 1.45
LRFN3-201ENST00000246529 TTC37Q6PGP7 1564 aa24.09■■□□□ 1.45
LRFN3-201ENST00000246529 PRKRIP1Q9H875 184 aaPredicted RBP24.09■■□□□ 1.45
LRFN3-201ENST00000246529 USP47Q96K76 1375 aa24.07■■□□□ 1.44
LRFN3-201ENST00000246529 SYCP2Q9BX26 1530 aa24.06■■□□□ 1.44
LRFN3-201ENST00000246529 ARHGAP5Q13017 1502 aa24.06■■□□□ 1.44
LRFN3-201ENST00000246529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.06■■□□□ 1.44
LRFN3-201ENST00000246529 KDM5DQ9BY66 1539 aa24.06■■□□□ 1.44
LRFN3-201ENST00000246529 KDM2AQ9Y2K7 1162 aa24.06■■□□□ 1.44
LRFN3-201ENST00000246529 POLR3GLQ9BT43 218 aa24.05■■□□□ 1.44
LRFN3-201ENST00000246529 ABCC2Q92887 1545 aa24.03■■□□□ 1.44
LRFN3-201ENST00000246529 CNGB1Q14028 1251 aaPredicted RBP24.02■■□□□ 1.44
LRFN3-201ENST00000246529 NEFLP07196 543 aa24.01■■□□□ 1.43
LRFN3-201ENST00000246529 RSPH4AQ5TD94 716 aa24.01■■□□□ 1.43
LRFN3-201ENST00000246529 BCORL1Q5H9F3 1711 aa23.99■■□□□ 1.43
LRFN3-201ENST00000246529 FAM9BQ8IZU0 186 aa23.99■■□□□ 1.43
LRFN3-201ENST00000246529 DCAF11Q8TEB1 546 aa23.99■■□□□ 1.43
LRFN3-201ENST00000246529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.99■■□□□ 1.43
LRFN3-201ENST00000246529 MRS2Q9HD23 443 aa23.99■■□□□ 1.43
LRFN3-201ENST00000246529 FAM135AQ9P2D6 1515 aa23.98■■□□□ 1.43
LRFN3-201ENST00000246529 UHRF1BP1Q6BDS2 1440 aa23.98■■□□□ 1.43
LRFN3-201ENST00000246529 CARD11Q9BXL7 1154 aa23.97■■□□□ 1.43
LRFN3-201ENST00000246529 KDM5CP41229 1560 aa23.96■■□□□ 1.43
LRFN3-201ENST00000246529 POLR1AO95602 1720 aaPredicted RBP23.95■■□□□ 1.43
LRFN3-201ENST00000246529 RALGAPBQ86X10 1494 aa23.95■■□□□ 1.42
LRFN3-201ENST00000246529 ARHGEF12Q9NZN5 1544 aa23.93■■□□□ 1.42
LRFN3-201ENST00000246529 TSHZ2Q9NRE2 1034 aa23.92■■□□□ 1.42
LRFN3-201ENST00000246529 DHX29Q7Z478 1369 aaKnown RBP23.92■■□□□ 1.42
LRFN3-201ENST00000246529 PLEKHH2Q8IVE3 1493 aa23.91■■□□□ 1.42
LRFN3-201ENST00000246529 MYO5CQ9NQX4 1742 aa23.91■■□□□ 1.42
LRFN3-201ENST00000246529 CLASP1Q7Z460 1538 aa23.9■■□□□ 1.42
LRFN3-201ENST00000246529 MAST1Q9Y2H9 1570 aa23.9■■□□□ 1.42
LRFN3-201ENST00000246529 RGL3Q3MIN7 710 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms