RNA–Protein interactions for RNA: ENST00000242783.10

PKN1-201, Transcript of protein kinase N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKN1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-201ENST00000242783 CCDC7Q96M83 1385 aa25.46■■□□□ 1.67
PKN1-201ENST00000242783 HECW1Q76N89 1606 aa25.46■■□□□ 1.67
PKN1-201ENST00000242783 ARHGEF11O15085 1522 aa25.46■■□□□ 1.67
PKN1-201ENST00000242783 IQGAP2Q13576 1575 aa25.45■■□□□ 1.67
PKN1-201ENST00000242783 CNTLNQ9NXG0 1405 aa25.45■■□□□ 1.66
PKN1-201ENST00000242783 TCOF1Q13428 1488 aaKnown RBP25.44■■□□□ 1.66
PKN1-201ENST00000242783 CFDP1Q9UEE9 299 aaPredicted RBP25.43■■□□□ 1.66
PKN1-201ENST00000242783 B4GALNT3Q6L9W6 998 aa25.42■■□□□ 1.66
PKN1-201ENST00000242783 KIF7Q2M1P5 1343 aa25.42■■□□□ 1.66
PKN1-201ENST00000242783 TARBP1Q13395 1621 aaKnown RBP25.4■■□□□ 1.66
PKN1-201ENST00000242783 MIA2Q96PC5 1412 aa25.4■■□□□ 1.66
PKN1-201ENST00000242783 ANKRD30BQ9BXX2 1392 aa25.4■■□□□ 1.66
PKN1-201ENST00000242783 DAPK1P53355 1430 aa25.39■■□□□ 1.66
PKN1-201ENST00000242783 ZNF608Q9ULD9 1512 aaPredicted RBP25.38■■□□□ 1.65
PKN1-201ENST00000242783 ABCC5O15440 1437 aa25.38■■□□□ 1.65
PKN1-201ENST00000242783 MSH5O43196 834 aa25.35■■□□□ 1.65
PKN1-201ENST00000242783 NCOA1Q15788 1441 aa25.34■■□□□ 1.65
PKN1-201ENST00000242783 WDR62O43379 1518 aa25.33■■□□□ 1.65
PKN1-201ENST00000242783 GCC2Q8IWJ2 1684 aa25.33■■□□□ 1.65
PKN1-201ENST00000242783 PKD2Q13563 968 aa25.33■■□□□ 1.65
PKN1-201ENST00000242783 PRG4Q92954 1404 aaPredicted RBP25.33■■□□□ 1.65
PKN1-201ENST00000242783 KDM2AQ9Y2K7 1162 aa25.32■■□□□ 1.64
PKN1-201ENST00000242783 CHMP7Q8WUX9 453 aaPredicted RBP25.31■■□□□ 1.64
PKN1-201ENST00000242783 AKNAQ7Z591 1439 aa25.31■■□□□ 1.64
PKN1-201ENST00000242783 PPP4R2Q9NY27 417 aa25.31■■□□□ 1.64
PKN1-201ENST00000242783 ERICH6Q7L0X2 663 aa25.3■■□□□ 1.64
PKN1-201ENST00000242783 RPRD2Q5VT52 1461 aaKnown RBP25.3■■□□□ 1.64
PKN1-201ENST00000242783 PBRM1Q86U86 1689 aa25.29■■□□□ 1.64
PKN1-201ENST00000242783 ADAMTS12P58397 1594 aa25.28■■□□□ 1.64
PKN1-201ENST00000242783 NUP153P49790 1475 aaKnown RBP25.26■■□□□ 1.63
PKN1-201ENST00000242783 ZBED9Q6R2W3 1325 aa25.24■■□□□ 1.63
PKN1-201ENST00000242783 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
PKN1-201ENST00000242783 TEX14Q8IWB6 1497 aa25.23■■□□□ 1.63
PKN1-201ENST00000242783 MRC2Q9UBG0 1479 aa25.21■■□□□ 1.63
PKN1-201ENST00000242783 DISP1Q96F81 1524 aa25.21■■□□□ 1.63
PKN1-201ENST00000242783 USP47Q96K76 1375 aa25.2■■□□□ 1.62
PKN1-201ENST00000242783 PLB1Q6P1J6 1458 aa25.19■■□□□ 1.62
PKN1-201ENST00000242783 SALL2Q9Y467 1007 aaPredicted RBP25.18■■□□□ 1.62
PKN1-201ENST00000242783 KIAA0586Q9BVV6 1533 aa25.18■■□□□ 1.62
PKN1-201ENST00000242783 CARD11Q9BXL7 1154 aa25.17■■□□□ 1.62
PKN1-201ENST00000242783 SPATA31E1Q6ZUB1 1445 aa25.16■■□□□ 1.62
PKN1-201ENST00000242783 TMC1Q8TDI8 760 aa25.15■■□□□ 1.62
PKN1-201ENST00000242783 NUP155O75694 1391 aa25.14■■□□□ 1.62
PKN1-201ENST00000242783 CAMSAP2Q08AD1 1489 aa25.13■■□□□ 1.61
PKN1-201ENST00000242783 DNMT1P26358 1616 aaKnown RBP25.13■■□□□ 1.61
PKN1-201ENST00000242783 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
PKN1-201ENST00000242783 PZPP20742 1482 aa25.13■■□□□ 1.61
PKN1-201ENST00000242783 PLEKHD1A6NEE1 506 aa25.12■■□□□ 1.61
PKN1-201ENST00000242783 TROQ12816 1431 aaPredicted RBP25.12■■□□□ 1.61
PKN1-201ENST00000242783 DCAF11Q8TEB1 546 aa25.11■■□□□ 1.61
PKN1-201ENST00000242783 JPH4Q96JJ6 628 aa25.11■■□□□ 1.61
PKN1-201ENST00000242783 HNRNPMP52272 730 aaKnown RBP eCLIP25.1■■□□□ 1.61
PKN1-201ENST00000242783 ST20-MTHFSA0A0A6YYL1 179 aa25.09■■□□□ 1.61
PKN1-201ENST00000242783 ANKRD30AQ9BXX3 1397 aa25.09■■□□□ 1.61
PKN1-201ENST00000242783 TSPY4P0CV99 314 aa25.09■■□□□ 1.61
PKN1-201ENST00000242783 TSPY10P0CW01 314 aa25.09■■□□□ 1.61
PKN1-201ENST00000242783 ERICH6BQ5W0A0 696 aa25.09■■□□□ 1.61
PKN1-201ENST00000242783 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
PKN1-201ENST00000242783 IFT140Q96RY7 1462 aa25.09■■□□□ 1.61
PKN1-201ENST00000242783 RAPGEF6Q8TEU7 1601 aa25.08■■□□□ 1.61
PKN1-201ENST00000242783 KIAA1107Q9UPP5 1409 aa25.08■■□□□ 1.61
PKN1-201ENST00000242783 RGL3Q3MIN7 710 aa25.07■■□□□ 1.6
PKN1-201ENST00000242783 FANCIQ9NVI1 1328 aa25.07■■□□□ 1.6
PKN1-201ENST00000242783 GPATCH8Q9UKJ3 1502 aaKnown RBP25.07■■□□□ 1.6
PKN1-201ENST00000242783 ANKRD50Q9ULJ7 1429 aa25.06■■□□□ 1.6
PKN1-201ENST00000242783 CCDC136Q96JN2 1154 aa25.06■■□□□ 1.6
PKN1-201ENST00000242783 DHX29Q7Z478 1369 aaKnown RBP25.05■■□□□ 1.6
PKN1-201ENST00000242783 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.03■■□□□ 1.64e-7■□□□□ 9.3
PKN1-201ENST00000242783 NUDCQ9Y266 331 aa25.03■■□□□ 1.6
PKN1-201ENST00000242783 KIF14Q15058 1648 aa25.01■■□□□ 1.59
PKN1-201ENST00000242783 ERCC6Q03468 1493 aa25■■□□□ 1.59
PKN1-201ENST00000242783 PNISRQ8TF01 805 aaKnown RBP24.98■■□□□ 1.59
PKN1-201ENST00000242783 BCL11AQ9H165 835 aa24.98■■□□□ 1.59
PKN1-201ENST00000242783 BCORL1Q5H9F3 1711 aa24.95■■□□□ 1.58
PKN1-201ENST00000242783 CARMIL2Q6F5E8 1435 aa24.95■■□□□ 1.58
PKN1-201ENST00000242783 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
PKN1-201ENST00000242783 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
PKN1-201ENST00000242783 SMG6Q86US8 1419 aaKnown RBP24.91■■□□□ 1.58
PKN1-201ENST00000242783 NBR1Q14596 966 aa24.91■■□□□ 1.58
PKN1-201ENST00000242783 ROCK2O75116 1388 aaKnown RBP24.9■■□□□ 1.58
PKN1-201ENST00000242783 KIF15Q9NS87 1388 aa24.9■■□□□ 1.58
PKN1-201ENST00000242783 MBD5Q9P267 1494 aa24.88■■□□□ 1.57
PKN1-201ENST00000242783 NBPF1Q3BBV0 1214 aa24.88■■□□□ 1.57
PKN1-201ENST00000242783 CC2D1BQ5T0F9 858 aaKnown RBP24.87■■□□□ 1.57
PKN1-201ENST00000242783 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
PKN1-201ENST00000242783 PAK3O75914 559 aaPredicted RBP24.84■■□□□ 1.57
PKN1-201ENST00000242783 SYNJ2O15056 1496 aa24.82■■□□□ 1.56
PKN1-201ENST00000242783 ADGRL2O95490 1459 aa24.82■■□□□ 1.56
PKN1-201ENST00000242783 MYBBP1AQ9BQG0 1328 aaKnown RBP24.82■■□□□ 1.56
PKN1-201ENST00000242783 ITSN2Q9NZM3 1697 aa24.81■■□□□ 1.56
PKN1-201ENST00000242783 ATP10BO94823 1461 aa24.81■■□□□ 1.56
PKN1-201ENST00000242783 NPM2Q86SE8 214 aaKnown RBP24.81■■□□□ 1.56
PKN1-201ENST00000242783 MAGI1Q96QZ7 1491 aaPredicted RBP24.81■■□□□ 1.56
PKN1-201ENST00000242783 KDM5CP41229 1560 aa24.8■■□□□ 1.56
PKN1-201ENST00000242783 ARID4BQ4LE39 1312 aaPredicted RBP24.8■■□□□ 1.56
PKN1-201ENST00000242783 EXOC6Q8TAG9 804 aa24.79■■□□□ 1.56
PKN1-201ENST00000242783 NOP58Q9Y2X3 529 aaKnown RBP24.79■■□□□ 1.56
PKN1-201ENST00000242783 RALGAPBQ86X10 1494 aa24.77■■□□□ 1.56
PKN1-201ENST00000242783 ADGBQ8N7X0 1667 aa24.77■■□□□ 1.56
PKN1-201ENST00000242783 RALBP1Q15311 655 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms