RNA–Protein interactions for RNA: ENST00000239666.8

PDZD11-201, Transcript of PDZ domain containing 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD11, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-201ENST00000239666 CFAP74Q9C0B2 1584 aa20.68■□□□□ 0.9
PDZD11-201ENST00000239666 RNF39Q9H2S5 420 aa20.67■□□□□ 0.9
PDZD11-201ENST00000239666 ARHGAP35Q9NRY4 1499 aa20.67■□□□□ 0.9
PDZD11-201ENST00000239666 ADGRL1O94910 1474 aa20.65■□□□□ 0.9
PDZD11-201ENST00000239666 SAMD1Q6SPF0 538 aaPredicted RBP20.65■□□□□ 0.9
PDZD11-201ENST00000239666 FANCAO15360 1455 aa20.6■□□□□ 0.89
PDZD11-201ENST00000239666 CLIP1P30622 1438 aa20.6■□□□□ 0.89
PDZD11-201ENST00000239666 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.59■□□□□ 0.89
PDZD11-201ENST00000239666 ATXN8OSP0DMR3 200 aa20.59■□□□□ 0.89
PDZD11-201ENST00000239666 AKNAQ7Z591 1439 aa20.59■□□□□ 0.89
PDZD11-201ENST00000239666 DENND4BO75064 1496 aaPredicted RBP20.58■□□□□ 0.89
PDZD11-201ENST00000239666 RAPGEF3O95398 923 aa20.57■□□□□ 0.88
PDZD11-201ENST00000239666 CCDC18Q5T9S5 1454 aa20.56■□□□□ 0.88
PDZD11-201ENST00000239666 PLCH2O75038 1416 aa20.56■□□□□ 0.88
PDZD11-201ENST00000239666 EFCAB2Q5VUJ9 269 aa20.56■□□□□ 0.88
PDZD11-201ENST00000239666 CDK13Q14004 1512 aaKnown RBP20.56■□□□□ 0.88
PDZD11-201ENST00000239666 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
PDZD11-201ENST00000239666 TROQ12816 1431 aaPredicted RBP20.53■□□□□ 0.88
PDZD11-201ENST00000239666 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
PDZD11-201ENST00000239666 KIF14Q15058 1648 aa20.52■□□□□ 0.88
PDZD11-201ENST00000239666 TTC37Q6PGP7 1564 aa20.51■□□□□ 0.87
PDZD11-201ENST00000239666 APLP2Q06481 763 aa20.5■□□□□ 0.87
PDZD11-201ENST00000239666 MYO5CQ9NQX4 1742 aa20.5■□□□□ 0.87
PDZD11-201ENST00000239666 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
PDZD11-201ENST00000239666 POGZQ7Z3K3 1410 aa20.47■□□□□ 0.87
PDZD11-201ENST00000239666 C1QBPQ07021 282 aaKnown RBP20.47■□□□□ 0.87
PDZD11-201ENST00000239666 FYCO1Q9BQS8 1478 aa20.47■□□□□ 0.87
PDZD11-201ENST00000239666 RICTORQ6R327 1708 aa20.47■□□□□ 0.87
PDZD11-201ENST00000239666 SCAPERQ9BY12 1400 aa20.44■□□□□ 0.86
PDZD11-201ENST00000239666 ZMYM4Q5VZL5 1548 aa20.44■□□□□ 0.86
PDZD11-201ENST00000239666 FRMPD1Q5SYB0 1578 aa20.43■□□□□ 0.86
PDZD11-201ENST00000239666 ARHGEF40Q8TER5 1519 aa20.41■□□□□ 0.86
PDZD11-201ENST00000239666 PCF11O94913 1555 aaKnown RBP20.4■□□□□ 0.86
PDZD11-201ENST00000239666 ARHGAP5Q13017 1502 aa20.4■□□□□ 0.86
PDZD11-201ENST00000239666 ZFYVE16Q7Z3T8 1539 aa20.39■□□□□ 0.85
PDZD11-201ENST00000239666 ZNF518AQ6AHZ1 1483 aa20.39■□□□□ 0.85
PDZD11-201ENST00000239666 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
PDZD11-201ENST00000239666 ADAMTSL3P82987 1691 aa20.38■□□□□ 0.85
PDZD11-201ENST00000239666 BCORL1Q5H9F3 1711 aa20.37■□□□□ 0.85
PDZD11-201ENST00000239666 ATP10AO60312 1499 aa20.33■□□□□ 0.85
PDZD11-201ENST00000239666 PTPRMP28827 1452 aa20.33■□□□□ 0.85
PDZD11-201ENST00000239666 MYT1LQ9UL68 1186 aa20.33■□□□□ 0.85
PDZD11-201ENST00000239666 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.85
PDZD11-201ENST00000239666 PREX2Q70Z35 1606 aa20.31■□□□□ 0.84
PDZD11-201ENST00000239666 CDC42BPBQ9Y5S2 1711 aa20.3■□□□□ 0.84
PDZD11-201ENST00000239666 C9orf84Q5VXU9 1444 aa20.29■□□□□ 0.84
PDZD11-201ENST00000239666 MTUS2Q5JR59 1369 aa20.29■□□□□ 0.84
PDZD11-201ENST00000239666 HECW2Q9P2P5 1572 aa20.28■□□□□ 0.84
PDZD11-201ENST00000239666 YEATS2Q9ULM3 1422 aa20.27■□□□□ 0.84
PDZD11-201ENST00000239666 KDM5CP41229 1560 aa20.27■□□□□ 0.84
PDZD11-201ENST00000239666 AFAP1Q8N556 730 aa20.27■□□□□ 0.84
PDZD11-201ENST00000239666 CEP162Q5TB80 1403 aa20.27■□□□□ 0.83
PDZD11-201ENST00000239666 PLEKHH2Q8IVE3 1493 aa20.26■□□□□ 0.83
PDZD11-201ENST00000239666 MLH3Q9UHC1 1453 aa20.26■□□□□ 0.83
PDZD11-201ENST00000239666 MADDQ8WXG6 1647 aa20.25■□□□□ 0.83
PDZD11-201ENST00000239666 CDC42BPAQ5VT25 1732 aa20.24■□□□□ 0.83
PDZD11-201ENST00000239666 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
PDZD11-201ENST00000239666 CFDP1Q9UEE9 299 aaPredicted RBP20.24■□□□□ 0.83
PDZD11-201ENST00000239666 ABCC1P33527 1531 aa20.22■□□□□ 0.83
PDZD11-201ENST00000239666 REREQ9P2R6 1566 aa20.21■□□□□ 0.83
PDZD11-201ENST00000239666 KIAA1107Q9UPP5 1409 aa20.21■□□□□ 0.83
PDZD11-201ENST00000239666 ESF1Q9H501 851 aaKnown RBP20.21■□□□□ 0.83
PDZD11-201ENST00000239666 SPINK5Q9NQ38 1064 aaPredicted RBP20.21■□□□□ 0.83
PDZD11-201ENST00000239666 ZNF777Q9ULD5 760 aaPredicted RBP20.21■□□□□ 0.83
PDZD11-201ENST00000239666 GPATCH8Q9UKJ3 1502 aaKnown RBP20.21■□□□□ 0.83
PDZD11-201ENST00000239666 RIMS1Q86UR5 1692 aaKnown RBP20.2■□□□□ 0.82
PDZD11-201ENST00000239666 CAPN15O75808 1086 aa20.2■□□□□ 0.82
PDZD11-201ENST00000239666 ITSN2Q9NZM3 1697 aa20.19■□□□□ 0.82
PDZD11-201ENST00000239666 MLECQ14165 292 aa20.19■□□□□ 0.82
PDZD11-201ENST00000239666 EHBP1L1Q8N3D4 1523 aa20.18■□□□□ 0.82
PDZD11-201ENST00000239666 FER1L4A9Z1Z3 1794 aa20.18■□□□□ 0.82
PDZD11-201ENST00000239666 RSPH4AQ5TD94 716 aa20.16■□□□□ 0.82
PDZD11-201ENST00000239666 SPAG9O60271 1321 aaKnown RBP20.15■□□□□ 0.82
PDZD11-201ENST00000239666 TRAPPC8Q9Y2L5 1435 aa20.15■□□□□ 0.82
PDZD11-201ENST00000239666 AGLP35573 1532 aa20.15■□□□□ 0.82
PDZD11-201ENST00000239666 ARHGEF12Q9NZN5 1544 aa20.15■□□□□ 0.82
PDZD11-201ENST00000239666 DIP2CQ9Y2E4 1556 aa20.14■□□□□ 0.81
PDZD11-201ENST00000239666 ZNF219Q9P2Y4 722 aaPredicted RBP20.14■□□□□ 0.81
PDZD11-201ENST00000239666 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
PDZD11-201ENST00000239666 SETD1BQ9UPS6 1966 aaKnown RBP20.12■□□□□ 0.81
PDZD11-201ENST00000239666 HNRNPMP52272 730 aaKnown RBP eCLIP20.11■□□□□ 0.81
PDZD11-201ENST00000239666 SUPT6HQ7KZ85 1726 aaKnown RBP20.1■□□□□ 0.81
PDZD11-201ENST00000239666 VPS8Q8N3P4 1428 aa20.1■□□□□ 0.81
PDZD11-201ENST00000239666 KIDINS220Q9ULH0 1771 aa20.09■□□□□ 0.81
PDZD11-201ENST00000239666 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
PDZD11-201ENST00000239666 SIGLEC1Q9BZZ2 1709 aa20.09■□□□□ 0.81
PDZD11-201ENST00000239666 CNTLNQ9NXG0 1405 aa20.09■□□□□ 0.81
PDZD11-201ENST00000239666 ABCA6Q8N139 1617 aa20.09■□□□□ 0.81
PDZD11-201ENST00000239666 LMTK3Q96Q04 1460 aa20.06■□□□□ 0.8
PDZD11-201ENST00000239666 LOC105371045A0A1W2PR82 267 aa20.06■□□□□ 0.8
PDZD11-201ENST00000239666 CACNB1Q02641 598 aaPredicted RBP20.06■□□□□ 0.8
PDZD11-201ENST00000239666 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
PDZD11-201ENST00000239666 TIAM1Q13009 1591 aa20.04■□□□□ 0.8
PDZD11-201ENST00000239666 RTEL1-TNFRSF6BF6WH68 1400 aa20.04■□□□□ 0.8
PDZD11-201ENST00000239666 ATP7AQ04656 1500 aa20.04■□□□□ 0.8
PDZD11-201ENST00000239666 PREX1Q8TCU6 1659 aa20.01■□□□□ 0.79
PDZD11-201ENST00000239666 NCOA2Q15596 1464 aa20.01■□□□□ 0.79
PDZD11-201ENST00000239666 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
PDZD11-201ENST00000239666 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
PDZD11-201ENST00000239666 ADGBQ8N7X0 1667 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms