RNA–Protein interactions for RNA: ENST00000238892.3

CRIPT-201, Transcript of CXXC repeat containing interactor of PDZ3 domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIPT, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIPT-201ENST00000238892 RICTORQ6R327 1708 aa14.23□□□□□ -0.13
CRIPT-201ENST00000238892 KCNH8Q96L42 1107 aa14.23□□□□□ -0.13
CRIPT-201ENST00000238892 ZFYVE16Q7Z3T8 1539 aa14.23□□□□□ -0.13
CRIPT-201ENST00000238892 FHOD3Q2V2M9 1422 aa14.22□□□□□ -0.13
CRIPT-201ENST00000238892 UBAP1LF5GYI3 381 aa14.22□□□□□ -0.13
CRIPT-201ENST00000238892 DENND4BO75064 1496 aaPredicted RBP14.21□□□□□ -0.13
CRIPT-201ENST00000238892 SETD1BQ9UPS6 1966 aaKnown RBP14.2□□□□□ -0.14
CRIPT-201ENST00000238892 RAPGEF3O95398 923 aa14.2□□□□□ -0.14
CRIPT-201ENST00000238892 NCOA1Q15788 1441 aa14.16□□□□□ -0.14
CRIPT-201ENST00000238892 EEA1Q15075 1411 aa14.16□□□□□ -0.14
CRIPT-201ENST00000238892 FOXD1Q16676 465 aa14.16□□□□□ -0.14
CRIPT-201ENST00000238892 PLPPR3Q6T4P5 718 aa14.16□□□□□ -0.14
CRIPT-201ENST00000238892 SIGLEC1Q9BZZ2 1709 aa14.11□□□□□ -0.15
CRIPT-201ENST00000238892 SAMD9Q5K651 1589 aa14.11□□□□□ -0.15
CRIPT-201ENST00000238892 C9orf84Q5VXU9 1444 aa14.09□□□□□ -0.15
CRIPT-201ENST00000238892 CSRNP3Q8WYN3 585 aa14.08□□□□□ -0.16
CRIPT-201ENST00000238892 ATP10BO94823 1461 aa14.08□□□□□ -0.16
CRIPT-201ENST00000238892 HSPA1LP34931 641 aa14.07□□□□□ -0.16
CRIPT-201ENST00000238892 RAPGEF6Q8TEU7 1601 aa14.06□□□□□ -0.16
CRIPT-201ENST00000238892 ATP10AO60312 1499 aa14.06□□□□□ -0.16
CRIPT-201ENST00000238892 TOM1O60784 492 aa14.03□□□□□ -0.16
CRIPT-201ENST00000238892 CPS1P31327 1500 aa14.03□□□□□ -0.16
CRIPT-201ENST00000238892 HECW1Q76N89 1606 aa14.03□□□□□ -0.16
CRIPT-201ENST00000238892 TRAPPC8Q9Y2L5 1435 aa14.03□□□□□ -0.16
CRIPT-201ENST00000238892 C3P01024 1663 aa14.02□□□□□ -0.17
CRIPT-201ENST00000238892 PLA2R1Q13018 1463 aa14.02□□□□□ -0.17
CRIPT-201ENST00000238892 MLECQ14165 292 aa14.02□□□□□ -0.17
CRIPT-201ENST00000238892 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
CRIPT-201ENST00000238892 REREQ9P2R6 1566 aa14.01□□□□□ -0.17
CRIPT-201ENST00000238892 PTPRKQ15262 1439 aa14□□□□□ -0.17
CRIPT-201ENST00000238892 PKD2Q13563 968 aa13.99□□□□□ -0.17
CRIPT-201ENST00000238892 NPATQ14207 1427 aa13.98□□□□□ -0.17
CRIPT-201ENST00000238892 CNTLNQ9NXG0 1405 aa13.98□□□□□ -0.17
CRIPT-201ENST00000238892 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
CRIPT-201ENST00000238892 ZNF335Q9H4Z2 1342 aaPredicted RBP13.97□□□□□ -0.17
CRIPT-201ENST00000238892 ZNF142P52746 1687 aaPredicted RBP13.97□□□□□ -0.17
CRIPT-201ENST00000238892 AGLP35573 1532 aa13.96□□□□□ -0.17
CRIPT-201ENST00000238892 CEBPAP49715 358 aaPredicted RBP13.96□□□□□ -0.18
CRIPT-201ENST00000238892 P3H3Q8IVL6 736 aa13.96□□□□□ -0.18
CRIPT-201ENST00000238892 PLEKHD1A6NEE1 506 aa13.95□□□□□ -0.18
CRIPT-201ENST00000238892 ZEB1P37275 1124 aaPredicted RBP13.94□□□□□ -0.18
CRIPT-201ENST00000238892 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.94□□□□□ -0.18
CRIPT-201ENST00000238892 HNRNPUL2Q1KMD3 747 aaKnown RBP13.94□□□□□ -0.18
CRIPT-201ENST00000238892 MROH2AA6NES4 1674 aa13.93□□□□□ -0.18
CRIPT-201ENST00000238892 TRIM26Q12899 539 aaPredicted RBP13.92□□□□□ -0.18
CRIPT-201ENST00000238892 TCOF1Q13428 1488 aaKnown RBP13.92□□□□□ -0.18
CRIPT-201ENST00000238892 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
CRIPT-201ENST00000238892 ARID3CA6NKF2 412 aa13.89□□□□□ -0.19
CRIPT-201ENST00000238892 ESF1Q9H501 851 aaKnown RBP13.89□□□□□ -0.19
CRIPT-201ENST00000238892 ACIN1Q9UKV3 1341 aaKnown RBP13.89□□□□□ -0.19
CRIPT-201ENST00000238892 SUPT6HQ7KZ85 1726 aaKnown RBP13.88□□□□□ -0.19
CRIPT-201ENST00000238892 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
CRIPT-201ENST00000238892 PPP6R1Q9UPN7 881 aa13.87□□□□□ -0.19
CRIPT-201ENST00000238892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.87□□□□□ -0.191e-5■■■■□ 25.8
CRIPT-201ENST00000238892 SCAPERQ9BY12 1400 aa13.86□□□□□ -0.19
CRIPT-201ENST00000238892 CDK11AQ9UQ88 783 aaPredicted RBP13.85□□□□□ -0.19
CRIPT-201ENST00000238892 MYO3AQ8NEV4 1616 aa13.84□□□□□ -0.19
CRIPT-201ENST00000238892 NCKAP5LQ9HCH0 1330 aa13.84□□□□□ -0.19
CRIPT-201ENST00000238892 ZNF518AQ6AHZ1 1483 aa13.84□□□□□ -0.19
CRIPT-201ENST00000238892 KDM5CP41229 1560 aa13.84□□□□□ -0.19
CRIPT-201ENST00000238892 RGS17Q9UGC6 210 aaPredicted RBP13.83□□□□□ -0.19
CRIPT-201ENST00000238892 PLCH2O75038 1416 aa13.83□□□□□ -0.19
CRIPT-201ENST00000238892 SHANK2Q9UPX8 1470 aa13.83□□□□□ -0.19
CRIPT-201ENST00000238892 DIP2CQ9Y2E4 1556 aa13.83□□□□□ -0.19
CRIPT-201ENST00000238892 RNF17Q9BXT8 1623 aaKnown RBP13.83□□□□□ -0.2
CRIPT-201ENST00000238892 CEP170BQ9Y4F5 1589 aaPredicted RBP13.83□□□□□ -0.2
CRIPT-201ENST00000238892 ALKQ9UM73 1620 aa13.81□□□□□ -0.2
CRIPT-201ENST00000238892 POLR1AO95602 1720 aaPredicted RBP13.8□□□□□ -0.2
CRIPT-201ENST00000238892 NEUROD1Q13562 356 aa13.8□□□□□ -0.2
CRIPT-201ENST00000238892 SYNMO15061 1565 aa13.8□□□□□ -0.2
CRIPT-201ENST00000238892 SETD1AO15047 1707 aaKnown RBP13.79□□□□□ -0.2
CRIPT-201ENST00000238892 CLIP1P30622 1438 aa13.79□□□□□ -0.2
CRIPT-201ENST00000238892 EFCAB2Q5VUJ9 269 aa13.78□□□□□ -0.2
CRIPT-201ENST00000238892 CDK13Q14004 1512 aaKnown RBP13.77□□□□□ -0.2
CRIPT-201ENST00000238892 KIF14Q15058 1648 aa13.77□□□□□ -0.21
CRIPT-201ENST00000238892 MYO5CQ9NQX4 1742 aa13.76□□□□□ -0.21
CRIPT-201ENST00000238892 TROQ12816 1431 aaPredicted RBP13.76□□□□□ -0.21
CRIPT-201ENST00000238892 RANGAP1P46060 587 aaPredicted RBP13.76□□□□□ -0.21
CRIPT-201ENST00000238892 UBTFP17480 764 aaKnown RBP13.75□□□□□ -0.21
CRIPT-201ENST00000238892 ARHGAP35Q9NRY4 1499 aa13.75□□□□□ -0.21
CRIPT-201ENST00000238892 ABCA6Q8N139 1617 aa13.75□□□□□ -0.21
CRIPT-201ENST00000238892 MLH3Q9UHC1 1453 aa13.74□□□□□ -0.21
CRIPT-201ENST00000238892 POTEAQ6S8J7 498 aa13.74□□□□□ -0.21
CRIPT-201ENST00000238892 VWDEQ8N2E2 1590 aa13.73□□□□□ -0.21
CRIPT-201ENST00000238892 CCDC18Q5T9S5 1454 aa13.73□□□□□ -0.21
CRIPT-201ENST00000238892 GTF3C3Q9Y5Q9 886 aa13.73□□□□□ -0.21
CRIPT-201ENST00000238892 A2ML1A8K2U0 1454 aa13.73□□□□□ -0.21
CRIPT-201ENST00000238892 UPF1Q92900 1129 aaKnown RBP eCLIP13.72□□□□□ -0.21
CRIPT-201ENST00000238892 NEURL4Q96JN8 1562 aa13.71□□□□□ -0.22
CRIPT-201ENST00000238892 ARHGAP5Q13017 1502 aa13.7□□□□□ -0.22
CRIPT-201ENST00000238892 CASKIN1Q8WXD9 1431 aa13.68□□□□□ -0.22
CRIPT-201ENST00000238892 ATP1B4Q9UN42 357 aaPredicted RBP13.67□□□□□ -0.22
CRIPT-201ENST00000238892 ZMYM3Q14202 1370 aa13.67□□□□□ -0.22
CRIPT-201ENST00000238892 DEPDC5O75140 1603 aa13.67□□□□□ -0.22
CRIPT-201ENST00000238892 LOC105371045A0A1W2PR82 267 aa13.67□□□□□ -0.22
CRIPT-201ENST00000238892 DNMT1P26358 1616 aaKnown RBP13.67□□□□□ -0.22
CRIPT-201ENST00000238892 PREX2Q70Z35 1606 aa13.65□□□□□ -0.22
CRIPT-201ENST00000238892 CDK12Q9NYV4 1490 aaPredicted RBP13.64□□□□□ -0.23
CRIPT-201ENST00000238892 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
CRIPT-201ENST00000238892 LRRC7Q96NW7 1537 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms