RNA–Protein interactions for RNA: ENST00000238892.3

CRIPT-201, Transcript of CXXC repeat containing interactor of PDZ3 domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIPT, Length 1,953 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIPT-201ENST00000238892 NISCHQ9Y2I1 1504 aa21■□□□□ 0.95
CRIPT-201ENST00000238892 ABCC9O60706 1549 aa19.96■□□□□ 0.79
CRIPT-201ENST00000238892 DNAJC5BQ9UF47 199 aa19.45■□□□□ 0.7
CRIPT-201ENST00000238892 CCDC180Q9P1Z9 1646 aa19.32■□□□□ 0.68
CRIPT-201ENST00000238892 DNAJC5Q9H3Z4 198 aa18.85■□□□□ 0.61
CRIPT-201ENST00000238892 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
CRIPT-201ENST00000238892 NACADO15069 1562 aa18.45■□□□□ 0.54
CRIPT-201ENST00000238892 PABPN1Q86U42 306 aaKnown RBP eCLIP18.26■□□□□ 0.51
CRIPT-201ENST00000238892 UNC13AQ9UPW8 1703 aa18.23■□□□□ 0.51
CRIPT-201ENST00000238892 CECR2Q9BXF3 1484 aa18.19■□□□□ 0.5
CRIPT-201ENST00000238892 SHROOM4Q9ULL8 1493 aa18.17■□□□□ 0.5
CRIPT-201ENST00000238892 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.5
CRIPT-201ENST00000238892 CC2D2AQ9P2K1 1620 aa18.08■□□□□ 0.49
CRIPT-201ENST00000238892 MYO15BQ96JP2 1530 aa17.95■□□□□ 0.46
CRIPT-201ENST00000238892 CUX2O14529 1486 aa17.92■□□□□ 0.46
CRIPT-201ENST00000238892 EIF4G1Q04637 1599 aaKnown RBP17.82■□□□□ 0.44
CRIPT-201ENST00000238892 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
CRIPT-201ENST00000238892 DCAF8L2P0C7V8 631 aa17.62■□□□□ 0.41
CRIPT-201ENST00000238892 DCAF1Q9Y4B6 1507 aa17.48■□□□□ 0.39
CRIPT-201ENST00000238892 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
CRIPT-201ENST00000238892 ERCC6Q03468 1493 aa17.43■□□□□ 0.38
CRIPT-201ENST00000238892 ZCCHC6Q5VYS8 1495 aaKnown RBP17.41■□□□□ 0.38
CRIPT-201ENST00000238892 SCRIBQ14160 1630 aa17.27■□□□□ 0.35
CRIPT-201ENST00000238892 THOC2Q8NI27 1593 aaKnown RBP17.06■□□□□ 0.32
CRIPT-201ENST00000238892 NCAPD3P42695 1498 aa16.95■□□□□ 0.3
CRIPT-201ENST00000238892 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.29
CRIPT-201ENST00000238892 HMGXB3Q12766 1538 aa16.83■□□□□ 0.28
CRIPT-201ENST00000238892 LAMC3Q9Y6N6 1575 aa16.81■□□□□ 0.28
CRIPT-201ENST00000238892 CHIC1Q5VXU3 224 aa16.8■□□□□ 0.28
CRIPT-201ENST00000238892 NESP48681 1621 aa16.8■□□□□ 0.28
CRIPT-201ENST00000238892 SMARCA2P51531 1590 aa16.76■□□□□ 0.27
CRIPT-201ENST00000238892 OSCARQ8IYS5 282 aa16.7■□□□□ 0.26
CRIPT-201ENST00000238892 PDS5BQ9NTI5 1447 aa16.7■□□□□ 0.26
CRIPT-201ENST00000238892 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
CRIPT-201ENST00000238892 ATAD2BQ9ULI0 1458 aa16.69■□□□□ 0.26
CRIPT-201ENST00000238892 RIMBP3CA6NJZ7 1639 aa16.66■□□□□ 0.26
CRIPT-201ENST00000238892 RIMBP3BA6NNM3 1639 aa16.66■□□□□ 0.26
CRIPT-201ENST00000238892 RIMBP3Q9UFD9 1639 aa16.66■□□□□ 0.26
CRIPT-201ENST00000238892 WDR62O43379 1518 aa16.62■□□□□ 0.25
CRIPT-201ENST00000238892 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
CRIPT-201ENST00000238892 BAZ1BQ9UIG0 1483 aaKnown RBP16.51■□□□□ 0.23
CRIPT-201ENST00000238892 ARHGEF11O15085 1522 aa16.49■□□□□ 0.23
CRIPT-201ENST00000238892 SMARCA4P51532 1647 aa16.46■□□□□ 0.23
CRIPT-201ENST00000238892 TRHP20396 242 aaPredicted RBP16.43■□□□□ 0.22
CRIPT-201ENST00000238892 PEG3Q9GZU2 1588 aa16.4■□□□□ 0.22
CRIPT-201ENST00000238892 CADPSQ9ULU8 1353 aa16.32■□□□□ 0.2
CRIPT-201ENST00000238892 CEP164Q9UPV0 1460 aa16.32■□□□□ 0.2
CRIPT-201ENST00000238892 ARAP1Q96P48 1450 aa16.24■□□□□ 0.19
CRIPT-201ENST00000238892 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
CRIPT-201ENST00000238892 RSF1Q96T23 1441 aaPredicted RBP16.21■□□□□ 0.19
CRIPT-201ENST00000238892 ILDR1Q86SU0 546 aaPredicted RBP16.19■□□□□ 0.18
CRIPT-201ENST00000238892 FANCD2Q9BXW9 1451 aa16.14■□□□□ 0.17
CRIPT-201ENST00000238892 MROH2BQ7Z745 1585 aa16.1■□□□□ 0.17
CRIPT-201ENST00000238892 IFT140Q96RY7 1462 aa16.07■□□□□ 0.16
CRIPT-201ENST00000238892 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
CRIPT-201ENST00000238892 CHD1O14646 1710 aa16■□□□□ 0.15
CRIPT-201ENST00000238892 CFTRP13569 1480 aa15.95■□□□□ 0.14
CRIPT-201ENST00000238892 EIF4G3O43432 1585 aaKnown RBP15.94■□□□□ 0.14
CRIPT-201ENST00000238892 ZNF608Q9ULD9 1512 aaPredicted RBP15.93■□□□□ 0.14
CRIPT-201ENST00000238892 WIZO95785 1651 aa15.87■□□□□ 0.13
CRIPT-201ENST00000238892 PRDM2Q13029 1718 aa15.87■□□□□ 0.13
CRIPT-201ENST00000238892 CLASP1Q7Z460 1538 aa15.86■□□□□ 0.13
CRIPT-201ENST00000238892 ABCC8Q09428 1581 aa15.81■□□□□ 0.12
CRIPT-201ENST00000238892 SYNJ1O43426 1573 aa15.8■□□□□ 0.12
CRIPT-201ENST00000238892 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
CRIPT-201ENST00000238892 ERCC6L2Q5T890 1561 aa15.79■□□□□ 0.12
CRIPT-201ENST00000238892 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
CRIPT-201ENST00000238892 WDR97A6NE52 1622 aa15.73■□□□□ 0.11
CRIPT-201ENST00000238892 GAPVD1Q14C86 1478 aa15.7■□□□□ 0.1
CRIPT-201ENST00000238892 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
CRIPT-201ENST00000238892 FBLN2P98095 1184 aa15.67■□□□□ 0.1
CRIPT-201ENST00000238892 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
CRIPT-201ENST00000238892 AQRO60306 1485 aaKnown RBP eCLIP15.64■□□□□ 0.09
CRIPT-201ENST00000238892 KIF13AQ9H1H9 1805 aa15.63■□□□□ 0.09
CRIPT-201ENST00000238892 MAGI1Q96QZ7 1491 aaPredicted RBP15.61■□□□□ 0.09
CRIPT-201ENST00000238892 KDM4FA0A1W2PPD8 638 aa15.61■□□□□ 0.09
CRIPT-201ENST00000238892 FBXO41Q8TF61 875 aa15.6■□□□□ 0.09
CRIPT-201ENST00000238892 SNAPC4Q5SXM2 1469 aa15.57■□□□□ 0.08
CRIPT-201ENST00000238892 CCDC88BA6NC98 1476 aa15.55■□□□□ 0.08
CRIPT-201ENST00000238892 HECW2Q9P2P5 1572 aa15.53■□□□□ 0.08
CRIPT-201ENST00000238892 KDM6BO15054 1643 aa15.53■□□□□ 0.08
CRIPT-201ENST00000238892 SYNJ2O15056 1496 aa15.52■□□□□ 0.07
CRIPT-201ENST00000238892 CHMP7Q8WUX9 453 aaPredicted RBP15.51■□□□□ 0.07
CRIPT-201ENST00000238892 LMTK3Q96Q04 1460 aa15.48■□□□□ 0.07
CRIPT-201ENST00000238892 POLA1P09884 1462 aaPredicted RBP15.47■□□□□ 0.07
CRIPT-201ENST00000238892 GRIN2BQ13224 1484 aa15.46■□□□□ 0.07
CRIPT-201ENST00000238892 ABCC10Q5T3U5 1492 aa15.44■□□□□ 0.06
CRIPT-201ENST00000238892 ADGRL1O94910 1474 aa15.4■□□□□ 0.06
CRIPT-201ENST00000238892 MAPKBP1O60336 1514 aa15.38■□□□□ 0.05
CRIPT-201ENST00000238892 SOCS7O14512 581 aa15.38■□□□□ 0.05
CRIPT-201ENST00000238892 DIP2BQ9P265 1576 aa15.38■□□□□ 0.05
CRIPT-201ENST00000238892 SOGA1O94964 1423 aa15.37■□□□□ 0.05
CRIPT-201ENST00000238892 TDRD9Q8NDG6 1382 aaKnown RBP15.35■□□□□ 0.05
CRIPT-201ENST00000238892 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
CRIPT-201ENST00000238892 SHROOM2Q13796 1616 aa15.34■□□□□ 0.05
CRIPT-201ENST00000238892 PBRM1Q86U86 1689 aa15.33■□□□□ 0.04
CRIPT-201ENST00000238892 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
CRIPT-201ENST00000238892 FAM69CQ0P6D2 419 aa15.31■□□□□ 0.04
CRIPT-201ENST00000238892 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
CRIPT-201ENST00000238892 NUP160Q12769 1436 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms