RNA–Protein interactions for RNA: ENST00000227163.8

SPI1-201, Transcript of Spi-1 proto-oncogene, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPI1, Length 1,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-201ENST00000227163 TROQ12816 1431 aaPredicted RBP35.08■■■■□ 3.21
SPI1-201ENST00000227163 SCAPERQ9BY12 1400 aa35.06■■■■□ 3.2
SPI1-201ENST00000227163 RIMS1Q86UR5 1692 aaKnown RBP35.06■■■■□ 3.2
SPI1-201ENST00000227163 LRRIQ1Q96JM4 1722 aa35.05■■■■□ 3.2
SPI1-201ENST00000227163 PCF11O94913 1555 aaKnown RBP35.04■■■■□ 3.2
SPI1-201ENST00000227163 YEATS2Q9ULM3 1422 aa35.04■■■■□ 3.2
SPI1-201ENST00000227163 ARHGAP5Q13017 1502 aa35.01■■■■□ 3.2
SPI1-201ENST00000227163 CCDC18Q5T9S5 1454 aa35.01■■■■□ 3.19
SPI1-201ENST00000227163 EFCAB2Q5VUJ9 269 aa35■■■■□ 3.19
SPI1-201ENST00000227163 CASKIN1Q8WXD9 1431 aa34.97■■■■□ 3.19
SPI1-201ENST00000227163 SIGLEC1Q9BZZ2 1709 aa34.95■■■■□ 3.18
SPI1-201ENST00000227163 ILDR1Q86SU0 546 aaPredicted RBP34.94■■■■□ 3.18
SPI1-201ENST00000227163 ZNF518AQ6AHZ1 1483 aa34.94■■■■□ 3.18
SPI1-201ENST00000227163 FER1L4A9Z1Z3 1794 aa34.9■■■■□ 3.18
SPI1-201ENST00000227163 FYCO1Q9BQS8 1478 aa34.9■■■■□ 3.18
SPI1-201ENST00000227163 C9orf84Q5VXU9 1444 aa34.89■■■■□ 3.18
SPI1-201ENST00000227163 PREX2Q70Z35 1606 aa34.88■■■■□ 3.17
SPI1-201ENST00000227163 ATP10AO60312 1499 aa34.87■■■■□ 3.17
SPI1-201ENST00000227163 LMTK3Q96Q04 1460 aa34.86■■■■□ 3.17
SPI1-201ENST00000227163 KDM5CP41229 1560 aa34.86■■■■□ 3.17
SPI1-201ENST00000227163 CDC42BPBQ9Y5S2 1711 aa34.84■■■■□ 3.17
SPI1-201ENST00000227163 MLECQ14165 292 aa34.83■■■■□ 3.17
SPI1-201ENST00000227163 PLPPR3Q6T4P5 718 aa34.8■■■■□ 3.16
SPI1-201ENST00000227163 ABCC1P33527 1531 aa34.79■■■■□ 3.16
SPI1-201ENST00000227163 ARHGEF12Q9NZN5 1544 aa34.77■■■■□ 3.16
SPI1-201ENST00000227163 MYT1LQ9UL68 1186 aa34.77■■■■□ 3.16
SPI1-201ENST00000227163 DIP2CQ9Y2E4 1556 aa34.74■■■■□ 3.15
SPI1-201ENST00000227163 ITSN2Q9NZM3 1697 aa34.74■■■■□ 3.15
SPI1-201ENST00000227163 CDC42BPAQ5VT25 1732 aa34.72■■■■□ 3.15
SPI1-201ENST00000227163 AFAP1Q8N556 730 aa34.72■■■■□ 3.15
SPI1-201ENST00000227163 ABCA6Q8N139 1617 aa34.7■■■■□ 3.15
SPI1-201ENST00000227163 REREQ9P2R6 1566 aa34.69■■■■□ 3.14
SPI1-201ENST00000227163 MLH3Q9UHC1 1453 aa34.67■■■■□ 3.14
SPI1-201ENST00000227163 TRAPPC8Q9Y2L5 1435 aa34.64■■■■□ 3.14
SPI1-201ENST00000227163 PREX1Q8TCU6 1659 aa34.6■■■■□ 3.13
SPI1-201ENST00000227163 HSPA2P54652 639 aa34.59■■■■□ 3.13
SPI1-201ENST00000227163 SAMD9LQ8IVG5 1584 aa34.57■■■■□ 3.13
SPI1-201ENST00000227163 SYCP2Q9BX26 1530 aa34.57■■■■□ 3.12
SPI1-201ENST00000227163 AGLP35573 1532 aa34.55■■■■□ 3.12
SPI1-201ENST00000227163 KIDINS220Q9ULH0 1771 aa34.54■■■■□ 3.12
SPI1-201ENST00000227163 ZNF777Q9ULD5 760 aaPredicted RBP34.54■■■■□ 3.12
SPI1-201ENST00000227163 GPATCH8Q9UKJ3 1502 aaKnown RBP34.54■■■■□ 3.12
SPI1-201ENST00000227163 MTUS2Q5JR59 1369 aa34.52■■■■□ 3.12
SPI1-201ENST00000227163 FBXO41Q8TF61 875 aa34.49■■■■□ 3.11
SPI1-201ENST00000227163 CCNB3Q8WWL7 1395 aa34.49■■■■□ 3.11
SPI1-201ENST00000227163 PLEKHH2Q8IVE3 1493 aa34.48■■■■□ 3.11
SPI1-201ENST00000227163 ESF1Q9H501 851 aaKnown RBP34.47■■■■□ 3.11
SPI1-201ENST00000227163 EHBP1L1Q8N3D4 1523 aa34.46■■■■□ 3.11
SPI1-201ENST00000227163 CEBPAP49715 358 aaPredicted RBP34.46■■■■□ 3.11
SPI1-201ENST00000227163 CEP162Q5TB80 1403 aa34.45■■■■□ 3.11
SPI1-201ENST00000227163 UHRF1BP1Q6BDS2 1440 aa34.44■■■■□ 3.1
SPI1-201ENST00000227163 CFDP1Q9UEE9 299 aaPredicted RBP34.43■■■■□ 3.1
SPI1-201ENST00000227163 C3P01024 1663 aa34.43■■■■□ 3.1
SPI1-201ENST00000227163 ATP7AQ04656 1500 aa34.42■■■■□ 3.1
SPI1-201ENST00000227163 SPAG9O60271 1321 aaKnown RBP34.42■■■■□ 3.1
SPI1-201ENST00000227163 KIAA1107Q9UPP5 1409 aa34.4■■■■□ 3.1
SPI1-201ENST00000227163 INO80Q9ULG1 1556 aaPredicted RBP34.4■■■■□ 3.1
SPI1-201ENST00000227163 CNTLNQ9NXG0 1405 aa34.39■■■■□ 3.1
SPI1-201ENST00000227163 TIAM1Q13009 1591 aa34.38■■■■□ 3.09
SPI1-201ENST00000227163 HNRNPMP52272 730 aaKnown RBP eCLIP34.35■■■■□ 3.09
SPI1-201ENST00000227163 SETD1BQ9UPS6 1966 aaKnown RBP34.34■■■■□ 3.09
SPI1-201ENST00000227163 SUPT6HQ7KZ85 1726 aaKnown RBP34.33■■■■□ 3.09
SPI1-201ENST00000227163 PLXNC1O60486 1568 aa34.31■■■■□ 3.08
SPI1-201ENST00000227163 MROH2AA6NES4 1674 aa34.3■■■■□ 3.08
SPI1-201ENST00000227163 A2MP01023 1474 aa34.27■■■■□ 3.08
SPI1-201ENST00000227163 ADGBQ8N7X0 1667 aa34.25■■■■□ 3.07
SPI1-201ENST00000227163 STRCQ7RTU9 1775 aa34.23■■■■□ 3.07
SPI1-201ENST00000227163 DMRT2Q9Y5R5 561 aa34.21■■■■□ 3.07
SPI1-201ENST00000227163 CLTCQ00610 1675 aaKnown RBP34.19■■■■□ 3.06
SPI1-201ENST00000227163 NPATQ14207 1427 aa34.19■■■■□ 3.06
SPI1-201ENST00000227163 NCOA2Q15596 1464 aa34.18■■■■□ 3.06
SPI1-201ENST00000227163 ZNF644Q9H582 1327 aaPredicted RBP34.16■■■■□ 3.06
SPI1-201ENST00000227163 CERKQ8TCT0 537 aa34.16■■■■□ 3.06
SPI1-201ENST00000227163 MBD5Q9P267 1494 aa34.15■■■■□ 3.06
SPI1-201ENST00000227163 CAMSAP2Q08AD1 1489 aa34.13■■■■□ 3.05
SPI1-201ENST00000227163 CCDC141Q6ZP82 1450 aa34.12■■■■□ 3.05
SPI1-201ENST00000227163 ZMYM3Q14202 1370 aa34.11■■■■□ 3.05
SPI1-201ENST00000227163 RTEL1-TNFRSF6BF6WH68 1400 aa34.1■■■■□ 3.05
SPI1-201ENST00000227163 VPS8Q8N3P4 1428 aa34.09■■■■□ 3.05
SPI1-201ENST00000227163 MYO3AQ8NEV4 1616 aa34.08■■■■□ 3.05
SPI1-201ENST00000227163 PTPRTO14522 1441 aa34.07■■■■□ 3.04
SPI1-201ENST00000227163 NCOA1Q15788 1441 aa34.07■■■■□ 3.04
SPI1-201ENST00000227163 GGT6Q6P531 493 aa34.07■■■■□ 3.04
SPI1-201ENST00000227163 ZNF142P52746 1687 aaPredicted RBP34.04■■■■□ 3.04
SPI1-201ENST00000227163 CAMSAP1Q5T5Y3 1602 aa34.03■■■■□ 3.04
SPI1-201ENST00000227163 LRRC9Q6ZRR7 1453 aa34■■■■□ 3.03
SPI1-201ENST00000227163 CEP170BQ9Y4F5 1589 aaPredicted RBP33.99■■■■□ 3.03
SPI1-201ENST00000227163 PTPRKQ15262 1439 aa33.99■■■■□ 3.03
SPI1-201ENST00000227163 PPP6R1Q9UPN7 881 aa33.99■■■■□ 3.03
SPI1-201ENST00000227163 DHX29Q7Z478 1369 aaKnown RBP33.98■■■■□ 3.03
SPI1-201ENST00000227163 ARHGEF5Q12774 1597 aa33.98■■■■□ 3.03
SPI1-201ENST00000227163 RSPH4AQ5TD94 716 aa33.95■■■■□ 3.03
SPI1-201ENST00000227163 FAM135AQ9P2D6 1515 aa33.94■■■■□ 3.02
SPI1-201ENST00000227163 KDM5DQ9BY66 1539 aa33.93■■■■□ 3.02
SPI1-201ENST00000227163 LOC105371045A0A1W2PR82 267 aa33.92■■■■□ 3.02
SPI1-201ENST00000227163 PLA2R1Q13018 1463 aa33.9■■■■□ 3.02
SPI1-201ENST00000227163 MAP3K1Q13233 1512 aa33.89■■■■□ 3.02
SPI1-201ENST00000227163 KIF3BO15066 747 aa33.88■■■■□ 3.01
SPI1-201ENST00000227163 TSPY4P0CV99 314 aa33.85■■■■□ 3.01
SPI1-201ENST00000227163 TSPY10P0CW01 314 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms