RNA–Protein interactions for RNA: ENST00000216019.11

DDX17-201, Transcript of DEAD-box helicase 17, humanhuman

TSL 1 (best)

Gene DDX17, Length 6,441 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX17-201ENST00000216019 HSP90AB1P08238 724 aaKnown RBP16.62■□□□□ 0.25
DDX17-201ENST00000216019 CARMIL2Q6F5E8 1435 aa16.62■□□□□ 0.25
DDX17-201ENST00000216019 TDRD9Q8NDG6 1382 aaKnown RBP16.62■□□□□ 0.25
DDX17-201ENST00000216019 KTN1Q86UP2 1357 aaKnown RBP16.61■□□□□ 0.25
DDX17-201ENST00000216019 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
DDX17-201ENST00000216019 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
DDX17-201ENST00000216019 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
DDX17-201ENST00000216019 TRHP20396 242 aaPredicted RBP16.59■□□□□ 0.25
DDX17-201ENST00000216019 PDS5BQ9NTI5 1447 aa16.59■□□□□ 0.25
DDX17-201ENST00000216019 HDGFP51858 240 aaKnown RBP16.59■□□□□ 0.25
DDX17-201ENST00000216019 FMN1Q68DA7 1419 aa16.58■□□□□ 0.25
DDX17-201ENST00000216019 NPHP1O15259 732 aa16.58■□□□□ 0.24
DDX17-201ENST00000216019 NUP155O75694 1391 aa16.57■□□□□ 0.24
DDX17-201ENST00000216019 KCNJ4P48050 445 aa16.55■□□□□ 0.24
DDX17-201ENST00000216019 TULP1O00294 542 aaPredicted RBP16.54■□□□□ 0.24
DDX17-201ENST00000216019 ANKRD30AQ9BXX3 1397 aa16.54■□□□□ 0.24
DDX17-201ENST00000216019 DNTTIP2Q5QJE6 756 aaKnown RBP16.54■□□□□ 0.24
DDX17-201ENST00000216019 HDGFL2Q7Z4V5 671 aaPredicted RBP16.54■□□□□ 0.24
DDX17-201ENST00000216019 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
DDX17-201ENST00000216019 FHOD3Q2V2M9 1422 aa16.54■□□□□ 0.24
DDX17-201ENST00000216019 FGD1P98174 961 aa16.53■□□□□ 0.24
DDX17-201ENST00000216019 SPRYD3Q8NCJ5 442 aa16.53■□□□□ 0.24
DDX17-201ENST00000216019 PLCB2Q00722 1185 aa16.53■□□□□ 0.24
DDX17-201ENST00000216019 HSCBQ8IWL3 235 aa16.52■□□□□ 0.24
DDX17-201ENST00000216019 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.23
DDX17-201ENST00000216019 HNRNPMP52272 730 aaKnown RBP eCLIP16.51■□□□□ 0.234e-7■■□□□ 14
DDX17-201ENST00000216019 RTN4Q9NQC3 1192 aaKnown RBP16.5■□□□□ 0.23
DDX17-201ENST00000216019 RAPGEF2Q9Y4G8 1499 aa16.5■□□□□ 0.23
DDX17-201ENST00000216019 RALBP1Q15311 655 aa16.48■□□□□ 0.23
DDX17-201ENST00000216019 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
DDX17-201ENST00000216019 APBB1O00213 710 aa16.48■□□□□ 0.23
DDX17-201ENST00000216019 U2AF1L5P0DN76 240 aaPredicted RBP16.48■□□□□ 0.23
DDX17-201ENST00000216019 U2AF1Q01081 240 aaKnown RBP eCLIP16.48■□□□□ 0.231e-15■□□□□ 11.3
DDX17-201ENST00000216019 GOLGA2Q08379 1002 aa16.47■□□□□ 0.23
DDX17-201ENST00000216019 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
DDX17-201ENST00000216019 RCAN3Q9UKA8 241 aa16.47■□□□□ 0.23
DDX17-201ENST00000216019 NUTM2DQ5VT03 806 aaPredicted RBP16.45■□□□□ 0.22
DDX17-201ENST00000216019 EIF3AQ14152 1382 aaKnown RBP16.45■□□□□ 0.22
DDX17-201ENST00000216019 NAP1L5Q96NT1 182 aaPredicted RBP16.45■□□□□ 0.22
DDX17-201ENST00000216019 ITPRIPQ8IWB1 547 aa16.45■□□□□ 0.22
DDX17-201ENST00000216019 KIF3BO15066 747 aa16.44■□□□□ 0.22
DDX17-201ENST00000216019 MCCP23508 829 aa16.44■□□□□ 0.22
DDX17-201ENST00000216019 L3MBTL2Q969R5 705 aa16.44■□□□□ 0.22
DDX17-201ENST00000216019 RBM19Q9Y4C8 960 aaKnown RBP16.44■□□□□ 0.22
DDX17-201ENST00000216019 ERICH6BQ5W0A0 696 aa16.43■□□□□ 0.22
DDX17-201ENST00000216019 IPO8O15397 1037 aaKnown RBP16.43■□□□□ 0.22
DDX17-201ENST00000216019 CCDC18Q5T9S5 1454 aa16.41■□□□□ 0.22
DDX17-201ENST00000216019 CADPSQ9ULU8 1353 aa16.41■□□□□ 0.22
DDX17-201ENST00000216019 CCDC146Q8IYE0 955 aa16.41■□□□□ 0.22
DDX17-201ENST00000216019 GOLGA6L6A8MZA4 724 aa16.4■□□□□ 0.22
DDX17-201ENST00000216019 GOLGA6L4A6NEF3 574 aa16.39■□□□□ 0.21
DDX17-201ENST00000216019 CALD1Q05682 793 aaKnown RBP16.38■□□□□ 0.21
DDX17-201ENST00000216019 CSB-PGBD3P0DP91 1061 aa16.37■□□□□ 0.21
DDX17-201ENST00000216019 RWDD1Q9H446 243 aaPredicted RBP16.37■□□□□ 0.21
DDX17-201ENST00000216019 SPAG9O60271 1321 aaKnown RBP16.37■□□□□ 0.21
DDX17-201ENST00000216019 RUSC2Q8N2Y8 1516 aa16.35■□□□□ 0.21
DDX17-201ENST00000216019 SMARCA4P51532 1647 aa16.35■□□□□ 0.21
DDX17-201ENST00000216019 ZNF330Q9Y3S2 320 aaPredicted RBP16.35■□□□□ 0.21
DDX17-201ENST00000216019 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
DDX17-201ENST00000216019 WASHC2CQ9Y4E1 1318 aa16.34■□□□□ 0.21
DDX17-201ENST00000216019 SMC4Q9NTJ3 1288 aa16.33■□□□□ 0.21
DDX17-201ENST00000216019 ATAD2BQ9ULI0 1458 aa16.33■□□□□ 0.21
DDX17-201ENST00000216019 TERF2IPQ9NYB0 399 aa16.32■□□□□ 0.2
DDX17-201ENST00000216019 DEKP35659 375 aaKnown RBP16.32■□□□□ 0.2
DDX17-201ENST00000216019 KIAA1211Q6ZU35 1233 aa16.32■□□□□ 0.2
DDX17-201ENST00000216019 PMFBP1Q8TBY8 1022 aa16.31■□□□□ 0.2
DDX17-201ENST00000216019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.31■□□□□ 0.2
DDX17-201ENST00000216019 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
DDX17-201ENST00000216019 TCERG1O14776 1098 aaKnown RBP16.3■□□□□ 0.2
DDX17-201ENST00000216019 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
DDX17-201ENST00000216019 DHX57Q6P158 1386 aaKnown RBP16.3■□□□□ 0.2
DDX17-201ENST00000216019 MFAP1P55081 439 aaKnown RBP16.29■□□□□ 0.2
DDX17-201ENST00000216019 TRAK1Q9UPV9 953 aa16.29■□□□□ 0.2
DDX17-201ENST00000216019 RSPH4AQ5TD94 716 aa16.29■□□□□ 0.2
DDX17-201ENST00000216019 CLUAP1Q96AJ1 413 aa16.29■□□□□ 0.2
DDX17-201ENST00000216019 DRC7Q8IY82 874 aa16.28■□□□□ 0.2
DDX17-201ENST00000216019 STK31Q9BXU1 1019 aa16.28■□□□□ 0.2
DDX17-201ENST00000216019 SLKQ9H2G2 1235 aaPredicted RBP16.28■□□□□ 0.2
DDX17-201ENST00000216019 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
DDX17-201ENST00000216019 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
DDX17-201ENST00000216019 GNL2Q13823 731 aaKnown RBP16.28■□□□□ 0.2
DDX17-201ENST00000216019 ISY1Q9ULR0 285 aaKnown RBP16.28■□□□□ 0.2
DDX17-201ENST00000216019 FANCD2Q9BXW9 1451 aa16.27■□□□□ 0.2
DDX17-201ENST00000216019 CENPJQ9HC77 1338 aaPredicted RBP16.27■□□□□ 0.2
DDX17-201ENST00000216019 CCDC144AA2RUR9 1427 aa16.27■□□□□ 0.19
DDX17-201ENST00000216019 NUTM2FA1L443 756 aa16.26■□□□□ 0.19
DDX17-201ENST00000216019 NRDCO43847 1150 aa16.26■□□□□ 0.19
DDX17-201ENST00000216019 MSNP26038 577 aaKnown RBP16.26■□□□□ 0.19
DDX17-201ENST00000216019 EID1Q9Y6B2 187 aa16.26■□□□□ 0.19
DDX17-201ENST00000216019 ST20-MTHFSA0A0A6YYL1 179 aa16.25■□□□□ 0.19
DDX17-201ENST00000216019 SLC4A10Q6U841 1118 aa16.25■□□□□ 0.19
DDX17-201ENST00000216019 NGDNQ8NEJ9 315 aaKnown RBP16.25■□□□□ 0.19
DDX17-201ENST00000216019 RRP7AQ9Y3A4 280 aaKnown RBP16.25■□□□□ 0.19
DDX17-201ENST00000216019 PANK3Q9H999 370 aa16.25■□□□□ 0.19
DDX17-201ENST00000216019 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
DDX17-201ENST00000216019 GZF1Q9H116 711 aaPredicted RBP16.25■□□□□ 0.19
DDX17-201ENST00000216019 CHMP3Q9Y3E7 222 aa16.24■□□□□ 0.19
DDX17-201ENST00000216019 GBP4Q96PP9 640 aa16.24■□□□□ 0.19
DDX17-201ENST00000216019 LTV1Q96GA3 475 aaPredicted RBP16.24■□□□□ 0.19
DDX17-201ENST00000216019 TRIM6-TRIM34B2RNG4 842 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms