RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 PTPN23Q9H3S7 1636 aa20.88■□□□□ 0.93
SRRD-201ENST00000215917 FOXD1Q16676 465 aa20.86■□□□□ 0.93
SRRD-201ENST00000215917 NAIPQ13075 1403 aa20.85■□□□□ 0.93
SRRD-201ENST00000215917 CFDP1Q9UEE9 299 aaPredicted RBP20.85■□□□□ 0.93
SRRD-201ENST00000215917 HFM1A2PYH4 1435 aa20.84■□□□□ 0.93
SRRD-201ENST00000215917 ANP32CO43423 234 aa20.83■□□□□ 0.93
SRRD-201ENST00000215917 PPP1R15AO75807 674 aaPredicted RBP20.82■□□□□ 0.92
SRRD-201ENST00000215917 NPM2Q86SE8 214 aaKnown RBP20.82■□□□□ 0.92
SRRD-201ENST00000215917 NUP160Q12769 1436 aa20.81■□□□□ 0.92
SRRD-201ENST00000215917 RAPGEF6Q8TEU7 1601 aa20.81■□□□□ 0.92
SRRD-201ENST00000215917 PLEKHD1A6NEE1 506 aa20.81■□□□□ 0.92
SRRD-201ENST00000215917 ARHGEF11O15085 1522 aa20.78■□□□□ 0.92
SRRD-201ENST00000215917 EIF5BO60841 1220 aaKnown RBP20.77■□□□□ 0.92
SRRD-201ENST00000215917 UACAQ9BZF9 1416 aa20.76■□□□□ 0.91
SRRD-201ENST00000215917 HNRNPUQ00839 825 aaKnown RBP eCLIP20.75■□□□□ 0.91
SRRD-201ENST00000215917 PTPRGP23470 1445 aa20.73■□□□□ 0.91
SRRD-201ENST00000215917 MIA2Q96PC5 1412 aa20.73■□□□□ 0.91
SRRD-201ENST00000215917 DAXXQ9UER7 740 aaPredicted RBP20.73■□□□□ 0.91
SRRD-201ENST00000215917 TROQ12816 1431 aaPredicted RBP20.72■□□□□ 0.91
SRRD-201ENST00000215917 MPHOSPH9Q99550 1183 aa20.71■□□□□ 0.91
SRRD-201ENST00000215917 RTN4Q9NQC3 1192 aaKnown RBP20.7■□□□□ 0.9
SRRD-201ENST00000215917 TCOF1Q13428 1488 aaKnown RBP20.7■□□□□ 0.9
SRRD-201ENST00000215917 ZNF326Q5BKZ1 582 aaKnown RBP20.69■□□□□ 0.9
SRRD-201ENST00000215917 TSHZ2Q9NRE2 1034 aa20.69■□□□□ 0.9
SRRD-201ENST00000215917 DAPK1P53355 1430 aa20.68■□□□□ 0.9
SRRD-201ENST00000215917 KDM6BO15054 1643 aa20.68■□□□□ 0.9
SRRD-201ENST00000215917 ABCC5O15440 1437 aa20.68■□□□□ 0.9
SRRD-201ENST00000215917 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
SRRD-201ENST00000215917 KIF14Q15058 1648 aa20.65■□□□□ 0.9
SRRD-201ENST00000215917 ATP10BO94823 1461 aa20.65■□□□□ 0.9
SRRD-201ENST00000215917 HNRNPMP52272 730 aaKnown RBP eCLIP20.64■□□□□ 0.89
SRRD-201ENST00000215917 FAM9BQ8IZU0 186 aa20.63■□□□□ 0.89
SRRD-201ENST00000215917 TIMELESSQ9UNS1 1208 aa20.63■□□□□ 0.89
SRRD-201ENST00000215917 GPATCH8Q9UKJ3 1502 aaKnown RBP20.63■□□□□ 0.89
SRRD-201ENST00000215917 CAMSAP2Q08AD1 1489 aa20.6■□□□□ 0.89
SRRD-201ENST00000215917 SALL2Q9Y467 1007 aaPredicted RBP20.59■□□□□ 0.89
SRRD-201ENST00000215917 CHD1O14646 1710 aa20.58■□□□□ 0.89
SRRD-201ENST00000215917 TSPY4P0CV99 314 aa20.56■□□□□ 0.88
SRRD-201ENST00000215917 TSPY10P0CW01 314 aa20.56■□□□□ 0.88
SRRD-201ENST00000215917 HSPA5P11021 654 aaKnown RBP20.56■□□□□ 0.88
SRRD-201ENST00000215917 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
SRRD-201ENST00000215917 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
SRRD-201ENST00000215917 RBM19Q9Y4C8 960 aaKnown RBP20.55■□□□□ 0.88
SRRD-201ENST00000215917 ABCA8O94911 1581 aa20.54■□□□□ 0.88
SRRD-201ENST00000215917 DENND4BO75064 1496 aaPredicted RBP20.53■□□□□ 0.88
SRRD-201ENST00000215917 AKNAQ7Z591 1439 aa20.52■□□□□ 0.88
SRRD-201ENST00000215917 EIF4G2P78344 907 aaKnown RBP eCLIP20.51■□□□□ 0.87
SRRD-201ENST00000215917 ROCK1Q13464 1354 aa20.5■□□□□ 0.87
SRRD-201ENST00000215917 DNMT1P26358 1616 aaKnown RBP20.5■□□□□ 0.87
SRRD-201ENST00000215917 NCOA1Q15788 1441 aa20.49■□□□□ 0.87
SRRD-201ENST00000215917 PKD2Q13563 968 aa20.49■□□□□ 0.87
SRRD-201ENST00000215917 GCC2Q8IWJ2 1684 aa20.48■□□□□ 0.87
SRRD-201ENST00000215917 ANKRD30AQ9BXX3 1397 aa20.48■□□□□ 0.87
SRRD-201ENST00000215917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.45■□□□□ 0.86
SRRD-201ENST00000215917 ARXQ96QS3 562 aa20.45■□□□□ 0.86
SRRD-201ENST00000215917 ANP32AP39687 249 aaKnown RBP20.44■□□□□ 0.86
SRRD-201ENST00000215917 ABCC10Q5T3U5 1492 aa20.43■□□□□ 0.86
SRRD-201ENST00000215917 NUP155O75694 1391 aa20.43■□□□□ 0.86
SRRD-201ENST00000215917 ANKRD50Q9ULJ7 1429 aa20.42■□□□□ 0.86
SRRD-201ENST00000215917 C9orf84Q5VXU9 1444 aa20.42■□□□□ 0.86
SRRD-201ENST00000215917 ITSN2Q9NZM3 1697 aa20.42■□□□□ 0.86
SRRD-201ENST00000215917 KDM2AQ9Y2K7 1162 aa20.42■□□□□ 0.86
SRRD-201ENST00000215917 ANKRD30BQ9BXX2 1392 aa20.41■□□□□ 0.86
SRRD-201ENST00000215917 NBPF8Q3BBV2 869 aa20.41■□□□□ 0.86
SRRD-201ENST00000215917 WASHC2AQ641Q2 1341 aa20.4■□□□□ 0.86
SRRD-201ENST00000215917 KIF15Q9NS87 1388 aa20.38■□□□□ 0.85
SRRD-201ENST00000215917 CDC42BPAQ5VT25 1732 aa20.37■□□□□ 0.85
SRRD-201ENST00000215917 B4GALNT3Q6L9W6 998 aa20.37■□□□□ 0.85
SRRD-201ENST00000215917 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
SRRD-201ENST00000215917 ADCY10Q96PN6 1610 aa20.36■□□□□ 0.85
SRRD-201ENST00000215917 C11orf95C9JLR9 678 aaPredicted RBP20.35■□□□□ 0.85
SRRD-201ENST00000215917 MYT1LQ9UL68 1186 aa20.35■□□□□ 0.85
SRRD-201ENST00000215917 ARHGAP5Q13017 1502 aa20.34■□□□□ 0.85
SRRD-201ENST00000215917 PZPP20742 1482 aa20.34■□□□□ 0.85
SRRD-201ENST00000215917 KDM5BQ9UGL1 1544 aa20.34■□□□□ 0.85
SRRD-201ENST00000215917 MRS2Q9HD23 443 aa20.32■□□□□ 0.84
SRRD-201ENST00000215917 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
SRRD-201ENST00000215917 CCDC136Q96JN2 1154 aa20.31■□□□□ 0.84
SRRD-201ENST00000215917 DEKP35659 375 aaKnown RBP20.31■□□□□ 0.84
SRRD-201ENST00000215917 ZBTB47Q9UFB7 747 aaPredicted RBP20.3■□□□□ 0.84
SRRD-201ENST00000215917 RPRD2Q5VT52 1461 aaKnown RBP20.29■□□□□ 0.84
SRRD-201ENST00000215917 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.29■□□□□ 0.84
SRRD-201ENST00000215917 ABCC2Q92887 1545 aa20.29■□□□□ 0.84
SRRD-201ENST00000215917 RGL3Q3MIN7 710 aa20.28■□□□□ 0.84
SRRD-201ENST00000215917 ADGRL2O95490 1459 aa20.28■□□□□ 0.84
SRRD-201ENST00000215917 MBD5Q9P267 1494 aa20.28■□□□□ 0.84
SRRD-201ENST00000215917 TTC37Q6PGP7 1564 aa20.28■□□□□ 0.84
SRRD-201ENST00000215917 SHROOM2Q13796 1616 aa20.28■□□□□ 0.84
SRRD-201ENST00000215917 KIAA1107Q9UPP5 1409 aa20.27■□□□□ 0.84
SRRD-201ENST00000215917 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
SRRD-201ENST00000215917 SYCP2Q9BX26 1530 aa20.27■□□□□ 0.84
SRRD-201ENST00000215917 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.26■□□□□ 0.83
SRRD-201ENST00000215917 EFCAB2Q5VUJ9 269 aa20.25■□□□□ 0.83
SRRD-201ENST00000215917 SAMD9LQ8IVG5 1584 aa20.25■□□□□ 0.83
SRRD-201ENST00000215917 CCDC141Q6ZP82 1450 aa20.25■□□□□ 0.83
SRRD-201ENST00000215917 AFAP1Q8N556 730 aa20.25■□□□□ 0.83
SRRD-201ENST00000215917 ADGBQ8N7X0 1667 aa20.24■□□□□ 0.83
SRRD-201ENST00000215917 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
SRRD-201ENST00000215917 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
SRRD-201ENST00000215917 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms