RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 ARHGEF40Q8TER5 1519 aa40.02■■■■■ 4
TSR3-201ENST00000007390 POGZQ7Z3K3 1410 aa40.02■■■■■ 4
TSR3-201ENST00000007390 LOC105371045A0A1W2PR82 267 aa40■■■■□ 3.99
TSR3-201ENST00000007390 MAGI2Q86UL8 1455 aa39.97■■■■□ 3.99
TSR3-201ENST00000007390 PREX2Q70Z35 1606 aa39.97■■■■□ 3.99
TSR3-201ENST00000007390 CDC42BPBQ9Y5S2 1711 aa39.94■■■■□ 3.98
TSR3-201ENST00000007390 ZFYVE16Q7Z3T8 1539 aa39.91■■■■□ 3.98
TSR3-201ENST00000007390 ZNF518AQ6AHZ1 1483 aa39.87■■■■□ 3.97
TSR3-201ENST00000007390 YEATS2Q9ULM3 1422 aa39.86■■■■□ 3.97
TSR3-201ENST00000007390 MTUS2Q5JR59 1369 aa39.85■■■■□ 3.97
TSR3-201ENST00000007390 CDC42BPAQ5VT25 1732 aa39.85■■■■□ 3.97
TSR3-201ENST00000007390 ABCC1P33527 1531 aa39.81■■■■□ 3.96
TSR3-201ENST00000007390 KDM5CP41229 1560 aa39.81■■■■□ 3.96
TSR3-201ENST00000007390 ADAMTSL3P82987 1691 aa39.8■■■■□ 3.96
TSR3-201ENST00000007390 GPATCH8Q9UKJ3 1502 aaKnown RBP39.8■■■■□ 3.96
TSR3-201ENST00000007390 EHBP1L1Q8N3D4 1523 aa39.79■■■■□ 3.96
TSR3-201ENST00000007390 BCORL1Q5H9F3 1711 aa39.78■■■■□ 3.96
TSR3-201ENST00000007390 VPS8Q8N3P4 1428 aa39.77■■■■□ 3.96
TSR3-201ENST00000007390 ARID4BQ4LE39 1312 aaPredicted RBP39.77■■■■□ 3.96
TSR3-201ENST00000007390 AFAP1Q8N556 730 aa39.74■■■■□ 3.95
TSR3-201ENST00000007390 ARHGEF12Q9NZN5 1544 aa39.74■■■■□ 3.95
TSR3-201ENST00000007390 CCNB3Q8WWL7 1395 aa39.72■■■■□ 3.95
TSR3-201ENST00000007390 ITSN2Q9NZM3 1697 aa39.7■■■■□ 3.95
TSR3-201ENST00000007390 ATP10AO60312 1499 aa39.7■■■■□ 3.95
TSR3-201ENST00000007390 HECW2Q9P2P5 1572 aa39.68■■■■□ 3.94
TSR3-201ENST00000007390 TRAPPC8Q9Y2L5 1435 aa39.68■■■■□ 3.94
TSR3-201ENST00000007390 SAMD9LQ8IVG5 1584 aa39.67■■■■□ 3.94
TSR3-201ENST00000007390 SIGLEC1Q9BZZ2 1709 aa39.67■■■■□ 3.94
TSR3-201ENST00000007390 MLH3Q9UHC1 1453 aa39.67■■■■□ 3.94
TSR3-201ENST00000007390 C9orf84Q5VXU9 1444 aa39.66■■■■□ 3.94
TSR3-201ENST00000007390 TIAM1Q13009 1591 aa39.65■■■■□ 3.94
TSR3-201ENST00000007390 PTPRMP28827 1452 aa39.63■■■■□ 3.94
TSR3-201ENST00000007390 MADDQ8WXG6 1647 aa39.63■■■■□ 3.93
TSR3-201ENST00000007390 CFDP1Q9UEE9 299 aaPredicted RBP39.63■■■■□ 3.93
TSR3-201ENST00000007390 ZNF777Q9ULD5 760 aaPredicted RBP39.61■■■■□ 3.93
TSR3-201ENST00000007390 KIAA1107Q9UPP5 1409 aa39.6■■■■□ 3.93
TSR3-201ENST00000007390 PLEKHH2Q8IVE3 1493 aa39.6■■■■□ 3.93
TSR3-201ENST00000007390 SYCP2Q9BX26 1530 aa39.59■■■■□ 3.93
TSR3-201ENST00000007390 DIP2CQ9Y2E4 1556 aa39.59■■■■□ 3.93
TSR3-201ENST00000007390 REREQ9P2R6 1566 aa39.55■■■■□ 3.92
TSR3-201ENST00000007390 MAP3K1Q13233 1512 aa39.54■■■■□ 3.92
TSR3-201ENST00000007390 ABCA6Q8N139 1617 aa39.54■■■■□ 3.92
TSR3-201ENST00000007390 NCOA2Q15596 1464 aa39.53■■■■□ 3.92
TSR3-201ENST00000007390 SUPT6HQ7KZ85 1726 aaKnown RBP39.53■■■■□ 3.92
TSR3-201ENST00000007390 MYT1LQ9UL68 1186 aa39.52■■■■□ 3.92
TSR3-201ENST00000007390 LRRC9Q6ZRR7 1453 aa39.49■■■■□ 3.91
TSR3-201ENST00000007390 KIDINS220Q9ULH0 1771 aa39.49■■■■□ 3.91
TSR3-201ENST00000007390 HNRNPMP52272 730 aaKnown RBP eCLIP39.48■■■■□ 3.91
TSR3-201ENST00000007390 RIMS1Q86UR5 1692 aaKnown RBP39.48■■■■□ 3.91
TSR3-201ENST00000007390 MLECQ14165 292 aa39.43■■■■□ 3.9
TSR3-201ENST00000007390 SPAG9O60271 1321 aaKnown RBP39.42■■■■□ 3.9
TSR3-201ENST00000007390 AGLP35573 1532 aa39.41■■■■□ 3.9
TSR3-201ENST00000007390 ZNF644Q9H582 1327 aaPredicted RBP39.4■■■■□ 3.9
TSR3-201ENST00000007390 FER1L4A9Z1Z3 1794 aa39.38■■■■□ 3.9
TSR3-201ENST00000007390 MBD5Q9P267 1494 aa39.38■■■■□ 3.9
TSR3-201ENST00000007390 INO80Q9ULG1 1556 aaPredicted RBP39.37■■■■□ 3.89
TSR3-201ENST00000007390 ATP7AQ04656 1500 aa39.36■■■■□ 3.89
TSR3-201ENST00000007390 KANK4Q5T7N3 995 aaPredicted RBP39.33■■■■□ 3.89
TSR3-201ENST00000007390 CAMSAP2Q08AD1 1489 aa39.3■■■■□ 3.88
TSR3-201ENST00000007390 RTEL1-TNFRSF6BF6WH68 1400 aa39.23■■■■□ 3.87
TSR3-201ENST00000007390 PLXNC1O60486 1568 aa39.22■■■■□ 3.87
TSR3-201ENST00000007390 CCDC141Q6ZP82 1450 aa39.22■■■■□ 3.87
TSR3-201ENST00000007390 A2MP01023 1474 aa39.2■■■■□ 3.87
TSR3-201ENST00000007390 APLP2Q06481 763 aa39.2■■■■□ 3.87
TSR3-201ENST00000007390 RSPH4AQ5TD94 716 aa39.2■■■■□ 3.87
TSR3-201ENST00000007390 LMTK3Q96Q04 1460 aa39.18■■■■□ 3.86
TSR3-201ENST00000007390 MYOM3Q5VTT5 1437 aa39.17■■■■□ 3.86
TSR3-201ENST00000007390 ARHGEF5Q12774 1597 aa39.16■■■■□ 3.86
TSR3-201ENST00000007390 MIA2Q96PC5 1412 aa39.15■■■■□ 3.86
TSR3-201ENST00000007390 ADGBQ8N7X0 1667 aa39.15■■■■□ 3.86
TSR3-201ENST00000007390 PLPPR3Q6T4P5 718 aa39.14■■■■□ 3.86
TSR3-201ENST00000007390 CNTLNQ9NXG0 1405 aa39.1■■■■□ 3.85
TSR3-201ENST00000007390 ESF1Q9H501 851 aaKnown RBP39.07■■■■□ 3.85
TSR3-201ENST00000007390 CEBPAP49715 358 aaPredicted RBP39.06■■■■□ 3.84
TSR3-201ENST00000007390 DHX29Q7Z478 1369 aaKnown RBP39.03■■■■□ 3.84
TSR3-201ENST00000007390 C3P01024 1663 aa39.01■■■■□ 3.84
TSR3-201ENST00000007390 TSPY4P0CV99 314 aa39■■■■□ 3.83
TSR3-201ENST00000007390 TSPY10P0CW01 314 aa39■■■■□ 3.83
TSR3-201ENST00000007390 MROH2AA6NES4 1674 aa38.97■■■■□ 3.83
TSR3-201ENST00000007390 PREX1Q8TCU6 1659 aa38.97■■■■□ 3.83
TSR3-201ENST00000007390 MAST1Q9Y2H9 1570 aa38.97■■■■□ 3.83
TSR3-201ENST00000007390 PPP6R1Q9UPN7 881 aa38.94■■■■□ 3.82
TSR3-201ENST00000007390 GGT6Q6P531 493 aa38.91■■■■□ 3.82
TSR3-201ENST00000007390 SETD1BQ9UPS6 1966 aaKnown RBP38.9■■■■□ 3.82
TSR3-201ENST00000007390 HSPA2P54652 639 aa38.9■■■■□ 3.82
TSR3-201ENST00000007390 FGD6Q6ZV73 1430 aa38.89■■■■□ 3.82
TSR3-201ENST00000007390 PTPN23Q9H3S7 1636 aa38.89■■■■□ 3.82
TSR3-201ENST00000007390 ZMYM3Q14202 1370 aa38.88■■■■□ 3.81
TSR3-201ENST00000007390 UHRF1BP1Q6BDS2 1440 aa38.88■■■■□ 3.81
TSR3-201ENST00000007390 CLTCQ00610 1675 aaKnown RBP38.86■■■■□ 3.81
TSR3-201ENST00000007390 TCOF1Q13428 1488 aaKnown RBP38.86■■■■□ 3.81
TSR3-201ENST00000007390 NPATQ14207 1427 aa38.85■■■■□ 3.81
TSR3-201ENST00000007390 KIF3BO15066 747 aa38.82■■■■□ 3.8
TSR3-201ENST00000007390 SHANK2Q9UPX8 1470 aa38.81■■■■□ 3.8
TSR3-201ENST00000007390 FAM135AQ9P2D6 1515 aa38.81■■■■□ 3.8
TSR3-201ENST00000007390 ABCC5O15440 1437 aa38.79■■■■□ 3.8
TSR3-201ENST00000007390 CROCC2H7BZ55 1655 aa38.76■■■■□ 3.8
TSR3-201ENST00000007390 DNMT1P26358 1616 aaKnown RBP38.74■■■■□ 3.79
TSR3-201ENST00000007390 DAPK1P53355 1430 aa38.73■■■■□ 3.79
TSR3-201ENST00000007390 PTPRKQ15262 1439 aa38.72■■■■□ 3.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms