RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Magi1Q6RHR9 1471 aa13.51□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Abcc2Q8VI47 1543 aa13.51□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Eif4g3Q80XI3 1579 aaKnown RBP13.49□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Zbtb7cQ8VCZ7 619 aa13.49□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Ttbk1Q6PCN3 1308 aa13.48□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Abcc5Q9R1X5 1436 aa13.48□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Tdrd9Q14BI7 1383 aa13.47□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Gcc2Q8CHG3 1679 aa13.47□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Gm14025A2AP89 1413 aa13.47□□□□□ -0.25
Sh3rf1-202ENSMUST00000209611 Pkd2O35245 966 aa13.45□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Rfx7F8VPJ6 1459 aa13.45□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Arhgef11Q68FM7 1552 aa13.44□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Map3k4O08648 1597 aa13.44□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Il16O54824 1322 aa13.44□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Mapk8ip2Q9ERE9 830 aa13.43□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Clstn2Q9ER65 966 aa13.43□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Rrp7aQ9D1C9 280 aaKnown RBP13.42□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Zfp644E9QA22 1323 aa13.41□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Gm13697A2AK42 830 aa13.41□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Arhgef40Q3UPH7 1517 aa13.41□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Hnrnpul2Q00PI9 745 aaKnown RBP13.4□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Arhgef12Q8R4H2 1543 aaKnown RBP13.4□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Bcl11aQ9QYE3 773 aa13.4□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Mlh3A0A1Y7VMP7 1443 aa13.4□□□□□ -0.26
Sh3rf1-202ENSMUST00000209611 Prex2Q3LAC4 1598 aa13.4□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Adcy10Q8C0T9 1614 aa13.39□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Fancd2Q80V62 1450 aa13.38□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Dnmt1P13864 1620 aaKnown RBP13.38□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Caskin1Q6P9K8 1431 aa13.38□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Map4P27546 1125 aaKnown RBP13.37□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Kiaa1551Q5DTW7 1521 aa13.37□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Nup155Q99P88 1391 aaKnown RBP13.37□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Sart1Q9Z315 806 aaKnown RBP13.36□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Mapkbp1Q6NS57 1503 aa13.36□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Trak1Q6PD31 939 aa13.36□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Rgl3Q3UYI5 709 aa13.35□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Rrbp1Q99PL5 1605 aaKnown RBP13.35□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Usp47Q8BY87 1376 aa13.35□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Arhgap5P97393 1501 aa13.34□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Stra8P70278 393 aa13.34□□□□□ -0.27
Sh3rf1-202ENSMUST00000209611 Abcc1O35379 1528 aa13.33□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Cdc42bpaQ3UU96 1719 aa13.33□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Mroh2aD3Z750 1679 aa13.31□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Arid3cA6PWV5 409 aa13.31□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Pabpn1Q8CCS6 302 aaKnown RBP13.3□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Kdm6bQ5NCY0 1641 aa13.3□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Kdm3bQ6ZPY7 1562 aa13.29□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Dennd4bQ3U1Y4 1499 aa13.29□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Sin3aQ60520 1274 aaKnown RBP13.29□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Ttll5Q8CHB8 1328 aa13.28□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Hdac5Q9Z2V6 1113 aa13.28□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Adgrb2Q8CGM1 1561 aa13.28□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Igf1rQ60751 1373 aa13.28□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Naip5Q9R016 1403 aa13.27□□□□□ -0.28
Sh3rf1-202ENSMUST00000209611 Zcchc11B2RX14 1644 aaKnown RBP13.27□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Anks4bQ8K3X6 423 aa13.26□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Atp10dQ8K2X1 1416 aa13.25□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Erich6D3Z6S9 713 aa13.25□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Slc24a1Q91WD8 1130 aa13.25□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Fhod3Q76LL6 1578 aa13.25□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Grwd1Q810D6 446 aaKnown RBP13.24□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Ythdc2B2RR83 1445 aaKnown RBP13.24□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Prdm16A2A935 1275 aa13.23□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Lemd3Q9WU40 921 aa13.23□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Dhx9O70133 1380 aaKnown RBP13.23□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Spag9Q58A65 1321 aaKnown RBP13.23□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Rprd2Q6NXI6 1469 aaKnown RBP13.22□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Trappc8E9PWG2 1437 aa13.22□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 SphkapQ6NSW3 1687 aa13.21□□□□□ -0.29
Sh3rf1-202ENSMUST00000209611 Camsap2Q8C1B1 1461 aa13.21□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Cwc22Q8C5N3 908 aaKnown RBP13.2□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Card11Q8CIS0 1159 aa13.2□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Pik3c2gO70167 1506 aa13.19□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 AlkP97793 1621 aa13.19□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Cul7Q8VE73 1689 aa13.19□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Wdr7Q920I9 1489 aa13.18□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Rundc1Q0VDN7 615 aa13.18□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Os9Q8K2C7 672 aa13.18□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Map3k5O35099 1380 aa13.17□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Cfap74Q3UY96 1578 aa13.17□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Adgrl2Q8JZZ7 1487 aa13.16□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 NrdcQ8BHG1 1161 aa13.16□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Fmn2Q9JL04 1578 aa13.16□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Fam208aQ69ZR9 1610 aaKnown RBP13.15□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Mroh3A0A1D5RM54 893 aa13.15□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Zbtb4Q5F293 982 aa13.15□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Pde4cQ3UEI1 686 aa13.15□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Kif3bQ61771 747 aa13.15□□□□□ -0.3
Sh3rf1-202ENSMUST00000209611 Gapvd1Q6PAR5 1458 aa13.15□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Cd109Q8R422 1442 aa13.15□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Tnnt3Q9QZ47 272 aa13.14□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Ssh2Q5SW75 1423 aa13.13□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Dapk1Q80YE7 1442 aa13.13□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Setbp1Q9Z180 1582 aa13.13□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Lamc1P02468 1607 aaKnown RBP13.12□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 DroshaQ5HZJ0 1373 aaKnown RBP13.12□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Rnf17Q99MV7 1640 aa13.12□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Chd1P40201 1711 aa13.12□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 NhsB1AV60 1647 aa13.11□□□□□ -0.31
Sh3rf1-202ENSMUST00000209611 Lrrc9Q8CDN9 1456 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 69.7 ms