RNA–Protein interactions for RNA: ENSMUST00000182709.7

Rnf4-207, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 3,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-207ENSMUST00000182709 Ccdc141E9Q8Q6 1531 aa20.83■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Aplp2Q06335 707 aa20.82■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Magi1Q6RHR9 1471 aa20.82■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Myt1Q8CFC2 1127 aa20.8■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Plekhh2Q8C115 1491 aa20.8■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Prex2Q3LAC4 1598 aa20.8■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Arhgef11Q68FM7 1552 aa20.79■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Nop58Q6DFW4 536 aaKnown RBP20.79■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Kdm6bQ5NCY0 1641 aa20.77■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Ncoa2Q61026 1462 aa20.77■□□□□ 0.92
Rnf4-207ENSMUST00000182709 Dnmt1P13864 1620 aaKnown RBP20.76■□□□□ 0.91
Rnf4-207ENSMUST00000182709 UacaQ8CGB3 1411 aa20.76■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Fam163aQ8CAA5 168 aa20.75■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Dennd4bQ3U1Y4 1499 aa20.75■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Gm14025A2AP89 1413 aa20.74■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Mroh2aD3Z750 1679 aa20.74■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Map3k4O08648 1597 aa20.74■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Arhgef12Q8R4H2 1543 aaKnown RBP20.73■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Arid3cA6PWV5 409 aa20.73■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Adcy10Q8C0T9 1614 aa20.72■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Dhx57Q6P5D3 1388 aaKnown RBP20.72■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Gcc2Q8CHG3 1679 aa20.71■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Pkd2O35245 966 aa20.71■□□□□ 0.91
Rnf4-207ENSMUST00000182709 Rrp7aQ9D1C9 280 aaKnown RBP20.7■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Gm38655A0A286YDK6 273 aa20.7■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Sin3aQ60520 1274 aaKnown RBP20.69■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Zcchc11B2RX14 1644 aaKnown RBP20.68■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Adgrb2Q8CGM1 1561 aa20.67■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Hnrnpul2Q00PI9 745 aaKnown RBP20.67■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Cdc42bpaQ3UU96 1719 aa20.67■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Trak1Q6PD31 939 aa20.65■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Kiaa1551Q5DTW7 1521 aa20.65■□□□□ 0.9
Rnf4-207ENSMUST00000182709 Abcc1O35379 1528 aa20.63■□□□□ 0.89
Rnf4-207ENSMUST00000182709 Sart1Q9Z315 806 aaKnown RBP20.62■□□□□ 0.89
Rnf4-207ENSMUST00000182709 Ankrd36D3Z4K0 1415 aa20.62■□□□□ 0.89
Rnf4-207ENSMUST00000182709 Rgl3Q3UYI5 709 aa20.6■□□□□ 0.89
Rnf4-207ENSMUST00000182709 Mapkbp1Q6NS57 1503 aa20.59■□□□□ 0.89
Rnf4-207ENSMUST00000182709 SphkapQ6NSW3 1687 aa20.59■□□□□ 0.89
Rnf4-207ENSMUST00000182709 Fancd2Q80V62 1450 aa20.59■□□□□ 0.89
Rnf4-207ENSMUST00000182709 Ttll5Q8CHB8 1328 aa20.58■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Trappc8E9PWG2 1437 aa20.56■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Il16O54824 1322 aa20.55■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Map4P27546 1125 aaKnown RBP20.55■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Arhgap5P97393 1501 aa20.55■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Usp47Q8BY87 1376 aa20.55■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Ythdc2B2RR83 1445 aaKnown RBP20.55■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Dhx9O70133 1380 aaKnown RBP20.54■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Znf608Q56A10 1511 aa20.53■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Pabpn1Q8CCS6 302 aaKnown RBP20.52■□□□□ 0.88
Rnf4-207ENSMUST00000182709 Nup155Q99P88 1391 aaKnown RBP20.51■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Rfx7F8VPJ6 1459 aa20.51■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Zbtb4Q5F293 982 aa20.51■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Grwd1Q810D6 446 aaKnown RBP20.5■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Mlh3A0A1Y7VMP7 1443 aa20.5■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Kdm3bQ6ZPY7 1562 aa20.5■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Rrbp1Q99PL5 1605 aaKnown RBP20.48■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Atp10dQ8K2X1 1416 aa20.48■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Map3k5O35099 1380 aa20.46■□□□□ 0.87
Rnf4-207ENSMUST00000182709 Slc24a1Q91WD8 1130 aa20.45■□□□□ 0.86
Rnf4-207ENSMUST00000182709 Naip5Q9R016 1403 aa20.45■□□□□ 0.86
Rnf4-207ENSMUST00000182709 Erich6D3Z6S9 713 aa20.44■□□□□ 0.86
Rnf4-207ENSMUST00000182709 AlkP97793 1621 aa20.44■□□□□ 0.86
Rnf4-207ENSMUST00000182709 Chd1P40201 1711 aa20.43■□□□□ 0.86
Rnf4-207ENSMUST00000182709 Gm13697A2AK42 830 aa20.42■□□□□ 0.86
Rnf4-207ENSMUST00000182709 Caskin1Q6P9K8 1431 aa20.41■□□□□ 0.86
Rnf4-207ENSMUST00000182709 PtprtQ99M80 1454 aa20.41■□□□□ 0.86
Rnf4-207ENSMUST00000182709 Gapvd1Q6PAR5 1458 aa20.36■□□□□ 0.85
Rnf4-207ENSMUST00000182709 Fam208aQ69ZR9 1610 aaKnown RBP20.34■□□□□ 0.85
Rnf4-207ENSMUST00000182709 Ssh2Q5SW75 1423 aa20.34■□□□□ 0.85
Rnf4-207ENSMUST00000182709 Spag9Q58A65 1321 aaKnown RBP20.33■□□□□ 0.85
Rnf4-207ENSMUST00000182709 Cul7Q8VE73 1689 aa20.32■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Rprd2Q6NXI6 1469 aaKnown RBP20.31■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Igf1rQ60751 1373 aa20.31■□□□□ 0.84
Rnf4-207ENSMUST00000182709 DiexfQ8BTT6 772 aaKnown RBP20.3■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Supt6hQ62383 1726 aaKnown RBP20.3■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Kif3bQ61771 747 aa20.29■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Clstn2Q9ER65 966 aa20.29■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Rundc1Q0VDN7 615 aa20.29■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Gm156Q58A37 223 aa20.28■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Lemd3Q9WU40 921 aa20.28■□□□□ 0.84
Rnf4-207ENSMUST00000182709 NhsB1AV60 1647 aa20.27■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Fhod3Q76LL6 1578 aa20.27■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Pde4cQ3UEI1 686 aa20.27■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Wdr7Q920I9 1489 aa20.27■□□□□ 0.84
Rnf4-207ENSMUST00000182709 Fam71e1A1L3C1 212 aa20.24■□□□□ 0.83
Rnf4-207ENSMUST00000182709 Setbp1Q9Z180 1582 aa20.22■□□□□ 0.83
Rnf4-207ENSMUST00000182709 Card11Q8CIS0 1159 aa20.22■□□□□ 0.83
Rnf4-207ENSMUST00000182709 Lrrc9Q8CDN9 1456 aa20.22■□□□□ 0.83
Rnf4-207ENSMUST00000182709 Cd109Q8R422 1442 aa20.21■□□□□ 0.83
Rnf4-207ENSMUST00000182709 Pik3c2gO70167 1506 aa20.21■□□□□ 0.83
Rnf4-207ENSMUST00000182709 Gm32742A0A1B0GT42 1604 aa20.2■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Fmn2Q9JL04 1578 aa20.19■□□□□ 0.82
Rnf4-207ENSMUST00000182709 SafbD3YXK2 937 aaKnown RBP20.19■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Ifit1bl1D3Z6F0 470 aa20.18■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Rnf17Q99MV7 1640 aa20.18■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Ppp1r18Q8BQ30 594 aa20.18■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Kdm2aP59997 1161 aa20.17■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Dapk1Q80YE7 1442 aa20.17■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Mroh3A0A1D5RM54 893 aa20.17■□□□□ 0.82
Rnf4-207ENSMUST00000182709 Prdm16A2A935 1275 aa20.17■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 15.9 ms