RNA–Protein interactions for RNA: ENSMUST00000127430.1

Smchd1-201, Transcript of Structural maintenance of chromosomes flexible hinge domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Smchd1, Length 7,052 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smchd1-201ENSMUST00000127430 EspnQ9ET47 871 aa12.78□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Rbm25B2RY56 838 aaKnown RBP12.78□□□□□ -0.36
Smchd1-201ENSMUST00000127430 Wwc2Q6NXJ0 1187 aa12.77□□□□□ -0.37
Smchd1-201ENSMUST00000127430 SrrtQ99MR6 875 aaKnown RBP12.77□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Ddrgk1Q80WW9 315 aa12.77□□□□□ -0.37
Smchd1-201ENSMUST00000127430 ChgaP26339 463 aaKnown RBP12.76□□□□□ -0.37
Smchd1-201ENSMUST00000127430 4933402E13RikQ9D4D2 429 aa12.76□□□□□ -0.37
Smchd1-201ENSMUST00000127430 PnnO35691 725 aaKnown RBP12.75□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Grwd1Q810D6 446 aaKnown RBP12.75□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Kiaa1211Q5PR69 1207 aa12.74□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Mapk8ip3Q9ESN9 1337 aa12.74□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Rbm10Q99KG3 930 aaKnown RBP12.74□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Gm973E9Q295 1059 aa12.73□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Senp3Q9EP97 568 aaKnown RBP12.73□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Nolc1E9Q5C9 702 aaKnown RBP12.72□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Scaf1Q5U4C3 1256 aaKnown RBP12.72□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Drc7Q6V3W6 876 aa12.72□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Ipo8Q7TMY7 1010 aa12.72□□□□□ -0.37
Smchd1-201ENSMUST00000127430 Eea1Q8BL66 1411 aa12.71□□□□□ -0.37
Smchd1-201ENSMUST00000127430 AppP12023 770 aa12.71□□□□□ -0.38
Smchd1-201ENSMUST00000127430 NudcO35685 332 aaKnown RBP12.7□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Fam13bQ8K2H3 851 aa12.7□□□□□ -0.38
Smchd1-201ENSMUST00000127430 MccE9PWI3 1003 aa12.7□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Map7d2A2AG50 781 aa12.7□□□□□ -0.38
Smchd1-201ENSMUST00000127430 VgfQ0VGU4 617 aa12.7□□□□□ -0.38
Smchd1-201ENSMUST00000127430 A0A0U1RNP2 1173 aa12.69□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Hsp90b1P08113 802 aaKnown RBP12.69□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Gm6268A2A3U9 297 aa12.69□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Noc3lQ8VI84 807 aaKnown RBP12.69□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Ccar1Q8CH18 1146 aaKnown RBP12.68□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Mia2Q91ZV0 1396 aa12.68□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Rb1cc1Q9ESK9 1588 aa12.67□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Becn1O88597 448 aa12.67□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Exoc6Q8R313 802 aa12.67□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Kdm2aP59997 1161 aa12.66□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Ftsj3Q9DBE9 838 aaKnown RBP12.66□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Plagl1Q9JLQ4 704 aa12.66□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Hspa5P20029 655 aaKnown RBP12.66□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Pes1Q9EQ61 584 aaKnown RBP12.66□□□□□ -0.38
Smchd1-201ENSMUST00000127430 RdxP26043 583 aaKnown RBP12.66□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Fnbp4Q6ZQ03 1031 aa12.65□□□□□ -0.38
Smchd1-201ENSMUST00000127430 IqubQ8CDK3 788 aa12.65□□□□□ -0.38
Smchd1-201ENSMUST00000127430 Hdgfl1Q2VPR5 283 aa12.65□□□□□ -0.38
Smchd1-201ENSMUST00000127430 HnrnpuQ8VEK3 800 aaKnown RBP12.64□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Mroh3A0A1D5RM54 893 aa12.64□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Golga3P55937 1487 aa12.64□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Srpk2O54781 681 aaKnown RBP12.63□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Ush1cQ9ES64 910 aa12.62□□□□□ -0.39
Smchd1-201ENSMUST00000127430 CalrP14211 416 aaKnown RBP12.61□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Trim30aP15533 496 aa12.61□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Zscan21Q07231 555 aa12.61□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Gm20521D3Z5F7 333 aa12.61□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Exosc9Q9JHI7 438 aaKnown RBP12.6□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Speer4f1Q9D5Q6 258 aa12.6□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Pnmal2G3X9N3 661 aa12.6□□□□□ -0.39
Smchd1-201ENSMUST00000127430 CgnP59242 1191 aa12.59□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Mfap1aC0HKD8 439 aaKnown RBP12.59□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Mfap1bC0HKD9 439 aaKnown RBP12.59□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Isy1Q69ZQ2 285 aaKnown RBP12.59□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Ripply1Q2WG77 201 aa12.58□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Mre11Q61216 706 aa12.58□□□□□ -0.39
Smchd1-201ENSMUST00000127430 Nbr1P97432 988 aa12.58□□□□□ -0.4
Smchd1-201ENSMUST00000127430 R3hcc1Q8BSI6 488 aa12.58□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Stard8Q8K031 1019 aa12.58□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Iqcf3Q9D498 203 aa12.58□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Znf704Q9ERQ3 566 aa12.58□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Fam43aQ8BUP8 424 aa12.57□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Cald1E9QA15 768 aaKnown RBP12.57□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Sin3aQ60520 1274 aaKnown RBP12.56□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Pdcl3Q8BVF2 240 aa12.56□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Chmp4cQ9D7F7 232 aa12.56□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Tex19.1Q99MV2 351 aa12.55□□□□□ -0.4
Smchd1-201ENSMUST00000127430 CrebrfQ8CDG5 640 aaKnown RBP12.55□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Cspp1B2RX88 1205 aa12.55□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Rsf1E9PWW9 1441 aaKnown RBP12.55□□□□□ -0.4
Smchd1-201ENSMUST00000127430 1700019A02RikA0A087WPV9 146 aa12.54□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Wdr78E9PYY5 807 aa12.54□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Fhad1A6PWD2 1420 aa12.54□□□□□ -0.4
Smchd1-201ENSMUST00000127430 CntlnA2AM05 1397 aa12.53□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Mtus2Q3UHD3 1353 aa12.53□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Zfp777B9EKF4 885 aa12.53□□□□□ -0.4
Smchd1-201ENSMUST00000127430 Rundc1Q0VDN7 615 aa12.52□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Cluap1Q8R3P7 413 aa12.52□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Sh3bp5Q9Z131 463 aa12.52□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Ubl4bQ9CQ84 188 aa12.52□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Rsph3aQ3UFY4 516 aa12.51□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Anapc15P60007 132 aa12.51□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Cers3Q1A3B0 383 aa12.5□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Pde3bQ61409 1100 aa12.5□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Gtf3c5Q8R2T8 520 aa12.49□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Sart3Q9JLI8 962 aaKnown RBP12.49□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Smarce1O54941 411 aaKnown RBP12.49□□□□□ -0.41
Smchd1-201ENSMUST00000127430 GorabQ8BRM2 368 aa12.49□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Paf1Q8K2T8 535 aa12.48□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Pkd2O35245 966 aa12.48□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Atp6v1dP57746 247 aa12.48□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Iffo2Q8R2V2 512 aa12.48□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Stag3O70576 1240 aa12.47□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Trerf1Q8BXJ2 1205 aa12.47□□□□□ -0.41
Smchd1-201ENSMUST00000127430 Polr3gQ6NXY9 223 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 78.2 ms