RNA–Protein interactions for RNA: ENSMUST00000117506.8

Ube4a-201, Transcript of Ubiquitin conjugation factor E4 A, mousemouse

TSL 1 (best) BASIC

Gene Ube4a, Length 6,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4a-201ENSMUST00000117506 Rrp7aQ9D1C9 280 aaKnown RBP8.36□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Rsph4aQ8BYM7 716 aa8.36□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Znf326O88291 580 aa8.35□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Ankrd36D3Z4K0 1415 aa8.35□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Dnajc5P60904 198 aa8.35□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Soga1E1U8D0 1418 aa8.35□□□□□ -1.07
Ube4a-201ENSMUST00000117506 CadpsQ80TJ1 1355 aa8.35□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Ccdc27Q3V036 639 aa8.35□□□□□ -1.07
Ube4a-201ENSMUST00000117506 SetQ9EQU5 289 aaKnown RBP8.34□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Arid4bA2CG63 1314 aaKnown RBP8.34□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Vps8Q0P5W1 1427 aa8.34□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Grin2aP35436 1464 aa8.34□□□□□ -1.07
Ube4a-201ENSMUST00000117506 Chmp4bQ9D8B3 224 aaKnown RBP8.33□□□□□ -1.08
Ube4a-201ENSMUST00000117506 PnnO35691 725 aaKnown RBP8.33□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Fam163aQ8CAA5 168 aa8.33□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Cabp1Q9JLK7 227 aa8.33□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Lemd3Q9WU40 921 aa8.33□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Map4P27546 1125 aaKnown RBP8.32□□□□□ -1.08
Ube4a-201ENSMUST00000117506 MlecQ6ZQI3 291 aaKnown RBP8.32□□□□□ -1.08
Ube4a-201ENSMUST00000117506 CanxP35564 591 aaKnown RBP8.32□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Mak16Q8BGS0 296 aaKnown RBP8.32□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Csrnp3P59055 597 aa8.32□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Mphosph9A6H5Y1 991 aa8.31□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Ccdc141E9Q8Q6 1531 aa8.31□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Gm973E9Q295 1059 aa8.31□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Pkd2O35245 966 aa8.31□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Ppm1gQ61074 542 aa8.3□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Nup155Q99P88 1391 aaKnown RBP8.3□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Rgl3Q3UYI5 709 aa8.3□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Ncapd3Q6ZQK0 1506 aa8.3□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Vsig10D3YX43 558 aa8.29□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Pcf11G3X9Z4 1553 aa8.29□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Arhgap31A6X8Z5 1425 aa8.29□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Pbrm1Q8BSQ9 1634 aaKnown RBP8.29□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Ankrd26Q811D2 1581 aa8.29□□□□□ -1.08
Ube4a-201ENSMUST00000117506 MyclP10166 368 aa8.28□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Gm14025A2AP89 1413 aa8.28□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Mroh3A0A1D5RM54 893 aa8.28□□□□□ -1.08
Ube4a-201ENSMUST00000117506 PtmsQ9D0J8 101 aaKnown RBP8.28□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Casc1Q6TDU8 730 aa8.28□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Prdm16A2A935 1275 aa8.28□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Map7O88735 730 aa8.28□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Card11Q8CIS0 1159 aa8.27□□□□□ -1.08
Ube4a-201ENSMUST00000117506 Plcb2A3KGF7 1181 aa8.27□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Il16O54824 1322 aa8.26□□□□□ -1.09
Ube4a-201ENSMUST00000117506 AU015836B2RUM3 263 aa8.26□□□□□ -1.09
Ube4a-201ENSMUST00000117506 IqubQ8CDK3 788 aa8.26□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Map7d2A2AG50 781 aa8.26□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Igf1rQ60751 1373 aa8.25□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Srpk2O54781 681 aaKnown RBP8.25□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Irx3P81067 507 aa8.25□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Sart1Q9Z315 806 aaKnown RBP8.25□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Rock2P70336 1388 aa8.25□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Hspa5P20029 655 aaKnown RBP8.25□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Disp1Q3TDN0 1521 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Caskin1Q6P9K8 1431 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Kif21aQ9QXL2 1672 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 MsnP26041 577 aaKnown RBP8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Stard8Q8K031 1019 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Erich3F6QRE9 1637 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Zfp777B9EKF4 885 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Trim30dE9PWL0 497 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Rfx7F8VPJ6 1459 aa8.24□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Zbtb4Q5F293 982 aa8.23□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Mug1P28665 1476 aa8.23□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Peg3Q3URU2 1571 aa8.23□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Mlh3A0A1Y7VMP7 1443 aa8.23□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Magi1Q6RHR9 1471 aa8.23□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Znf316Q6PGE4 1016 aa8.23□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Samd9lQ69Z37 1561 aa8.23□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Nsd2Q8BVE8 1365 aa8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Pla2r1Q62028 1487 aa8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Tdrd9Q14BI7 1383 aa8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Mbd3Q9Z2D8 285 aaKnown RBP8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Aebp2Q9Z248 504 aaKnown RBP8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Prdm10Q3UTQ7 1184 aa8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Rad21Q61550 635 aaKnown RBP8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Trak1Q6PD31 939 aa8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Gm20521D3Z5F7 333 aa8.22□□□□□ -1.09
Ube4a-201ENSMUST00000117506 Arid3cA6PWV5 409 aa8.21□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Nup160Q9Z0W3 1402 aaKnown RBP8.21□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Gm38655A0A286YDK6 273 aa8.21□□□□□ -1.1
Ube4a-201ENSMUST00000117506 MccE9PWI3 1003 aa8.21□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Arhgap5P97393 1501 aa8.2□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Spag9Q58A65 1321 aaKnown RBP8.2□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Eif4g1Q6NZJ6 1600 aaKnown RBP8.2□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Gpatch8A2A6A1 1505 aa8.2□□□□□ -1.1
Ube4a-201ENSMUST00000117506 NexmifQ5DTT1 1515 aa8.2□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Mrs2Q5NCE8 434 aa8.19□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Rrp12Q6P5B0 1295 aaKnown RBP8.19□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Grwd1Q810D6 446 aaKnown RBP8.19□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Naip2Q9QUK4 1447 aa8.19□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Cald1E9QA15 768 aaKnown RBP8.18□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Unc13aQ4KUS2 1712 aa8.18□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Usp47Q8BY87 1376 aa8.18□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Neo1P97798 1493 aa8.18□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Pes1Q9EQ61 584 aaKnown RBP8.17□□□□□ -1.1
Ube4a-201ENSMUST00000117506 DroshaQ5HZJ0 1373 aaKnown RBP8.17□□□□□ -1.1
Ube4a-201ENSMUST00000117506 RdxP26043 583 aaKnown RBP8.17□□□□□ -1.1
Ube4a-201ENSMUST00000117506 Wwc2Q6NXJ0 1187 aa8.17□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms