RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Abcc2Q8VI47 1543 aa9.86□□□□□ -0.83
Chm-202ENSMUST00000113388 Cep170Q6A065 1588 aa9.85□□□□□ -0.83
Chm-202ENSMUST00000113388 PtprtQ99M80 1454 aa9.85□□□□□ -0.83
Chm-202ENSMUST00000113388 Pcdh10E9PXQ7 1057 aa9.84□□□□□ -0.83
Chm-202ENSMUST00000113388 Aebp1Q640N1 1128 aa9.84□□□□□ -0.83
Chm-202ENSMUST00000113388 Map3k1P53349 1493 aa9.83□□□□□ -0.84
Chm-202ENSMUST00000113388 Plekhg3Q4VAC9 1341 aa9.83□□□□□ -0.84
Chm-202ENSMUST00000113388 BC005561E9Q5E2 1589 aa9.82□□□□□ -0.84
Chm-202ENSMUST00000113388 Slc24a1Q91WD8 1130 aa9.82□□□□□ -0.84
Chm-202ENSMUST00000113388 Adamts12Q811B3 1600 aa9.82□□□□□ -0.84
Chm-202ENSMUST00000113388 Vgll3P85442 326 aa9.81□□□□□ -0.84
Chm-202ENSMUST00000113388 Zbtb4Q5F293 982 aa9.81□□□□□ -0.84
Chm-202ENSMUST00000113388 Fyco1Q8VDC1 1437 aa9.81□□□□□ -0.84
Chm-202ENSMUST00000113388 Eif4g1Q6NZJ6 1600 aaKnown RBP9.8□□□□□ -0.84
Chm-202ENSMUST00000113388 Hnrnpul2Q00PI9 745 aaKnown RBP9.8□□□□□ -0.84
Chm-202ENSMUST00000113388 4933402E13RikQ9D4D2 429 aa9.8□□□□□ -0.84
Chm-202ENSMUST00000113388 Dnmt1P13864 1620 aaKnown RBP9.8□□□□□ -0.84
Chm-202ENSMUST00000113388 Tnnt2P50752 301 aa9.79□□□□□ -0.84
Chm-202ENSMUST00000113388 Ppp4r2Q0VGB7 417 aa9.79□□□□□ -0.84
Chm-202ENSMUST00000113388 Kif27Q7M6Z4 1394 aa9.79□□□□□ -0.84
Chm-202ENSMUST00000113388 Calr4Q3TQS0 420 aa9.78□□□□□ -0.84
Chm-202ENSMUST00000113388 Arhgap31A6X8Z5 1425 aa9.78□□□□□ -0.84
Chm-202ENSMUST00000113388 Polr1aO35134 1717 aaKnown RBP9.78□□□□□ -0.84
Chm-202ENSMUST00000113388 Map3k4O08648 1597 aa9.78□□□□□ -0.84
Chm-202ENSMUST00000113388 DekQ7TNV0 380 aaKnown RBP9.77□□□□□ -0.84
Chm-202ENSMUST00000113388 Rbm10Q99KG3 930 aaKnown RBP9.77□□□□□ -0.84
Chm-202ENSMUST00000113388 Slx4Q6P1D7 1565 aa9.77□□□□□ -0.84
Chm-202ENSMUST00000113388 Eea1Q8BL66 1411 aa9.77□□□□□ -0.85
Chm-202ENSMUST00000113388 AU015836B2RUM3 263 aa9.76□□□□□ -0.85
Chm-202ENSMUST00000113388 Gpatch8A2A6A1 1505 aa9.76□□□□□ -0.85
Chm-202ENSMUST00000113388 Chd1P40201 1711 aa9.76□□□□□ -0.85
Chm-202ENSMUST00000113388 Arhgef12Q8R4H2 1543 aaKnown RBP9.76□□□□□ -0.85
Chm-202ENSMUST00000113388 AampJ3QN89 436 aa9.74□□□□□ -0.85
Chm-202ENSMUST00000113388 Pdcl3Q8BVF2 240 aa9.74□□□□□ -0.85
Chm-202ENSMUST00000113388 Zcchc11B2RX14 1644 aaKnown RBP9.74□□□□□ -0.85
Chm-202ENSMUST00000113388 Ankrd26Q811D2 1581 aa9.74□□□□□ -0.85
Chm-202ENSMUST00000113388 Arhgef5E9Q7D5 1581 aa9.73□□□□□ -0.85
Chm-202ENSMUST00000113388 Znf608Q56A10 1511 aa9.72□□□□□ -0.85
Chm-202ENSMUST00000113388 IbspQ61711 324 aa9.72□□□□□ -0.85
Chm-202ENSMUST00000113388 Wdr43Q6ZQL4 677 aaKnown RBP9.72□□□□□ -0.85
Chm-202ENSMUST00000113388 NclP09405 707 aaKnown RBP9.72□□□□□ -0.85
Chm-202ENSMUST00000113388 AcrbpQ3V140 540 aa9.71□□□□□ -0.85
Chm-202ENSMUST00000113388 Abca5Q8K448 1642 aa9.71□□□□□ -0.85
Chm-202ENSMUST00000113388 Mier1Q5UAK0 511 aa9.71□□□□□ -0.85
Chm-202ENSMUST00000113388 Lmod3E9QA62 571 aa9.7□□□□□ -0.86
Chm-202ENSMUST00000113388 BlmO88700 1416 aa9.7□□□□□ -0.86
Chm-202ENSMUST00000113388 Ccdc141E9Q8Q6 1531 aa9.7□□□□□ -0.86
Chm-202ENSMUST00000113388 Supt16hQ920B9 1047 aa9.7□□□□□ -0.86
Chm-202ENSMUST00000113388 AI481877A2ALV5 1481 aa9.69□□□□□ -0.86
Chm-202ENSMUST00000113388 Fam43aQ8BUP8 424 aa9.69□□□□□ -0.86
Chm-202ENSMUST00000113388 Arap1Q4LDD4 1452 aa9.68□□□□□ -0.86
Chm-202ENSMUST00000113388 UbtfP25976 765 aaKnown RBP9.67□□□□□ -0.86
Chm-202ENSMUST00000113388 DmtnQ9WV69 405 aa9.67□□□□□ -0.86
Chm-202ENSMUST00000113388 Armcx1Q9CX83 456 aa9.66□□□□□ -0.86
Chm-202ENSMUST00000113388 Pcf11G3X9Z4 1553 aa9.66□□□□□ -0.86
Chm-202ENSMUST00000113388 Aebp2Q9Z248 504 aaKnown RBP9.66□□□□□ -0.86
Chm-202ENSMUST00000113388 Trim26Q99PN3 545 aa9.66□□□□□ -0.86
Chm-202ENSMUST00000113388 Atp10dQ8K2X1 1416 aa9.66□□□□□ -0.86
Chm-202ENSMUST00000113388 Fbxo3Q9DC63 480 aa9.65□□□□□ -0.86
Chm-202ENSMUST00000113388 Ak9G3UYQ4 1894 aa9.65□□□□□ -0.86
Chm-202ENSMUST00000113388 Pprc1Q6NZN1 1644 aa9.65□□□□□ -0.86
Chm-202ENSMUST00000113388 Rangap1P46061 589 aaKnown RBP9.65□□□□□ -0.87
Chm-202ENSMUST00000113388 Igf1rQ60751 1373 aa9.65□□□□□ -0.87
Chm-202ENSMUST00000113388 Zbtb7cQ8VCZ7 619 aa9.63□□□□□ -0.87
Chm-202ENSMUST00000113388 Nolc1E9Q5C9 702 aaKnown RBP9.63□□□□□ -0.87
Chm-202ENSMUST00000113388 Stard8Q8K031 1019 aa9.63□□□□□ -0.87
Chm-202ENSMUST00000113388 Ncoa3O09000 1398 aa9.63□□□□□ -0.87
Chm-202ENSMUST00000113388 Ncoa2Q61026 1462 aa9.62□□□□□ -0.87
Chm-202ENSMUST00000113388 Depdc5P61460 1591 aa9.62□□□□□ -0.87
Chm-202ENSMUST00000113388 Wdr7Q920I9 1489 aa9.62□□□□□ -0.87
Chm-202ENSMUST00000113388 Znf692Q3U381 531 aa9.62□□□□□ -0.87
Chm-202ENSMUST00000113388 Lrrc9Q8CDN9 1456 aa9.62□□□□□ -0.87
Chm-202ENSMUST00000113388 CntlnA2AM05 1397 aa9.62□□□□□ -0.87
Chm-202ENSMUST00000113388 Rrp9Q91WM3 475 aaKnown RBP9.61□□□□□ -0.87
Chm-202ENSMUST00000113388 Magi1Q6RHR9 1471 aa9.61□□□□□ -0.87
Chm-202ENSMUST00000113388 Gtf2a1Q99PM3 378 aa9.61□□□□□ -0.87
Chm-202ENSMUST00000113388 Kdm5bQ80Y84 1544 aa9.61□□□□□ -0.87
Chm-202ENSMUST00000113388 Rapgef6Q5NCJ1 1609 aa9.61□□□□□ -0.87
Chm-202ENSMUST00000113388 Prex2Q3LAC4 1598 aa9.6□□□□□ -0.87
Chm-202ENSMUST00000113388 TonslQ6NZL6 1363 aa9.6□□□□□ -0.87
Chm-202ENSMUST00000113388 Dnajc5gQ8C632 165 aa9.6□□□□□ -0.87
Chm-202ENSMUST00000113388 Setbp1Q9Z180 1582 aa9.6□□□□□ -0.87
Chm-202ENSMUST00000113388 Rrbp1Q99PL5 1605 aaKnown RBP9.6□□□□□ -0.87
Chm-202ENSMUST00000113388 MlecQ6ZQI3 291 aaKnown RBP9.59□□□□□ -0.87
Chm-202ENSMUST00000113388 Mroh2aD3Z750 1679 aa9.59□□□□□ -0.87
Chm-202ENSMUST00000113388 Scaf1Q5U4C3 1256 aaKnown RBP9.59□□□□□ -0.87
Chm-202ENSMUST00000113388 Mug1P28665 1476 aa9.59□□□□□ -0.87
Chm-202ENSMUST00000113388 BbxQ8VBW5 907 aa9.58□□□□□ -0.88
Chm-202ENSMUST00000113388 Naip1Q9QWK5 1403 aa9.58□□□□□ -0.88
Chm-202ENSMUST00000113388 Fancd2Q80V62 1450 aa9.58□□□□□ -0.88
Chm-202ENSMUST00000113388 Fam50aQ9WV03 339 aaKnown RBP9.57□□□□□ -0.88
Chm-202ENSMUST00000113388 Chic2Q9D9G3 165 aa9.57□□□□□ -0.88
Chm-202ENSMUST00000113388 Lmo7E9PYF4 1699 aaKnown RBP9.57□□□□□ -0.88
Chm-202ENSMUST00000113388 Tdrd9Q14BI7 1383 aa9.56□□□□□ -0.88
Chm-202ENSMUST00000113388 Erich3F6QRE9 1637 aa9.55□□□□□ -0.88
Chm-202ENSMUST00000113388 Ccnb3Q810T2 1396 aa9.55□□□□□ -0.88
Chm-202ENSMUST00000113388 Tshz2Q68FE9 1030 aa9.55□□□□□ -0.88
Chm-202ENSMUST00000113388 A2mQ6GQT1 1474 aa9.55□□□□□ -0.88
Chm-202ENSMUST00000113388 Fam163aQ8CAA5 168 aa9.55□□□□□ -0.88
Chm-202ENSMUST00000113388 Arid4aF8VPQ2 1261 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms