RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 AqrQ8CFQ3 1481 aaKnown RBP9.84□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Fhad1A6PWD2 1420 aa9.84□□□□□ -0.83
Bdnf-204ENSMUST00000111044 Htatsf1Q8BGC0 757 aa9.83□□□□□ -0.84
Bdnf-204ENSMUST00000111044 BccipQ9CWI3 316 aa9.83□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Duox2A2AQ99 1517 aa9.83□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Thoc2B1AZI6 1594 aaKnown RBP9.83□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Carmil1Q6EDY6 1374 aa9.83□□□□□ -0.84
Bdnf-204ENSMUST00000111044 PogzQ8BZH4 1409 aaKnown RBP9.83□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Dhx29Q6PGC1 1365 aaKnown RBP9.81□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Ankrd26Q811D2 1581 aa9.8□□□□□ -0.84
Bdnf-204ENSMUST00000111044 PnisrA2AJT4 805 aaKnown RBP9.8□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Prkrip1Q9CWV6 186 aaKnown RBP9.8□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Zfp777B9EKF4 885 aa9.8□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Aebp1Q640N1 1128 aa9.8□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Znf316Q6PGE4 1016 aa9.79□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Erich3F6QRE9 1637 aa9.79□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Vps8Q0P5W1 1427 aa9.79□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Kcnh8P59111 1102 aa9.78□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Gtf3c5Q8R2T8 520 aa9.78□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Cux1P53564 1515 aa9.78□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Mbd3Q9Z2D8 285 aaKnown RBP9.78□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Phf14Q9D4H9 881 aa9.78□□□□□ -0.84
Bdnf-204ENSMUST00000111044 Rad54l2Q99NG0 1466 aa9.78□□□□□ -0.84
Bdnf-204ENSMUST00000111044 CatipB9EKE5 520 aa9.77□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Zbtb4Q5F293 982 aa9.77□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Pprc1Q6NZN1 1644 aa9.77□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Kif20aP97329 887 aa9.77□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Pcf11G3X9Z4 1553 aa9.76□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Fam135aQ6NS59 1506 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Naip5Q9R016 1403 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 L3mbtl2P59178 703 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 EprsQ8CGC7 1512 aaKnown RBP9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Znf692Q3U381 531 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Rrp12Q6P5B0 1295 aaKnown RBP9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Mink1Q9JM52 1308 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Slx4Q6P1D7 1565 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Ttll13A4Q9F6 804 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 NudcO35685 332 aaKnown RBP9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 EspnQ9ET47 871 aa9.75□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Cul7Q8VE73 1689 aa9.74□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Nkx1-2P42580 305 aa9.74□□□□□ -0.85
Bdnf-204ENSMUST00000111044 B4galnt3Q6L8S8 986 aa9.74□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Ythdc1E9Q5K9 736 aaKnown RBP9.73□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Hsp90ab1P11499 724 aaKnown RBP9.73□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Dnajc5bQ9CQ94 199 aa9.73□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Zbtb7cQ8VCZ7 619 aa9.73□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Ncoa1P70365 1447 aa9.72□□□□□ -0.85
Bdnf-204ENSMUST00000111044 4930567H17RikQ3V0K5 233 aa9.72□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Crocc2F6XLV1 1638 aa9.72□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Mroh3A0A1D5RM54 893 aa9.71□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Cwc22Q8C5N3 908 aaKnown RBP9.71□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Chic2Q9D9G3 165 aa9.71□□□□□ -0.85
Bdnf-204ENSMUST00000111044 Samd9lQ69Z37 1561 aa9.71□□□□□ -0.85
Bdnf-204ENSMUST00000111044 SynmQ70IV5 1561 aa9.71□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Trim44Q9QXA7 346 aa9.7□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Chmp5Q9D7S9 219 aa9.7□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Kank1E9Q238 1360 aa9.7□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Urb2E9Q7L1 1524 aaKnown RBP9.69□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Trim30dE9PWL0 497 aa9.69□□□□□ -0.86
Bdnf-204ENSMUST00000111044 3425401B19RikD3Z1D3 1412 aa9.69□□□□□ -0.86
Bdnf-204ENSMUST00000111044 NgefQ8CHT1 710 aa9.69□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Ipo8Q7TMY7 1010 aa9.68□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Armcx1Q9CX83 456 aa9.67□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Lmo7E9PYF4 1699 aaKnown RBP9.67□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Ddrgk1Q80WW9 315 aa9.67□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Dbr1Q923B1 550 aa9.67□□□□□ -0.86
Bdnf-204ENSMUST00000111044 TnikP83510 1323 aa9.67□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Fhod3Q76LL6 1578 aa9.66□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Tpm2P58774 284 aa9.66□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Mrc2Q64449 1479 aa9.66□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Pdlim2Q8R1G6 349 aa9.66□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Spryd3E9Q9B3 442 aa9.65□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Tnnt2P50752 301 aa9.65□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Mapk8ip3Q9ESN9 1337 aa9.65□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Rad21Q61550 635 aaKnown RBP9.65□□□□□ -0.86
Bdnf-204ENSMUST00000111044 Peg3Q3URU2 1571 aa9.65□□□□□ -0.87
Bdnf-204ENSMUST00000111044 ArxO35085 564 aa9.65□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Dusp27Q148W8 1138 aa9.65□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Mak16Q8BGS0 296 aaKnown RBP9.65□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Gm1043A0A140LJC2 1431 aa9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Kif27Q7M6Z4 1394 aa9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 CadpsQ80TJ1 1355 aa9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Ccnb3Q810T2 1396 aa9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Paxip1Q6NZQ4 1056 aa9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Eif2s2Q99L45 331 aaKnown RBP9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Polr1aO35134 1717 aaKnown RBP9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Plb1Q3TTY0 1478 aa9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Rock2P70336 1388 aa9.64□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Tex2Q6ZPJ0 1128 aaKnown RBP9.63□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Gm7298A0A0N4SVU1 1476 aa9.63□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Disp1Q3TDN0 1521 aa9.62□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Zscan21Q07231 555 aa9.62□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Pla2r1Q62028 1487 aa9.62□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Kif21aQ9QXL2 1672 aa9.62□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Naip2Q9QUK4 1447 aa9.62□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Plekhg5Q66T02 1073 aa9.61□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Dennd4bQ3U1Y4 1499 aa9.61□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Mphosph9A6H5Y1 991 aa9.6□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Usp47Q8BY87 1376 aa9.6□□□□□ -0.87
Bdnf-204ENSMUST00000111044 Zfp444Q3TDV8 331 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms