RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Adcy10Q8C0T9 1614 aa22.08■■□□□ 1.12
Vcan-201ENSMUST00000109543 Kiaa1551Q5DTW7 1521 aa22.07■■□□□ 1.12
Vcan-201ENSMUST00000109543 Mtus2Q3UHD3 1353 aa22.06■■□□□ 1.12
Vcan-201ENSMUST00000109543 Setbp1Q9Z180 1582 aa22.05■■□□□ 1.12
Vcan-201ENSMUST00000109543 Zfp644E9QA22 1323 aa22.05■■□□□ 1.12
Vcan-201ENSMUST00000109543 Csrnp3P59055 597 aa22.05■■□□□ 1.12
Vcan-201ENSMUST00000109543 Rusc2Q80U22 1514 aa22.04■■□□□ 1.12
Vcan-201ENSMUST00000109543 Magi1Q6RHR9 1471 aa22.02■■□□□ 1.12
Vcan-201ENSMUST00000109543 Dhx57Q6P5D3 1388 aaKnown RBP22.01■■□□□ 1.11
Vcan-201ENSMUST00000109543 Ccdc141E9Q8Q6 1531 aa22.01■■□□□ 1.11
Vcan-201ENSMUST00000109543 Map3k4O08648 1597 aa22.01■■□□□ 1.11
Vcan-201ENSMUST00000109543 SphkapQ6NSW3 1687 aa22.01■■□□□ 1.11
Vcan-201ENSMUST00000109543 Mroh2aD3Z750 1679 aa21.99■■□□□ 1.11
Vcan-201ENSMUST00000109543 Il16O54824 1322 aa21.98■■□□□ 1.11
Vcan-201ENSMUST00000109543 Kdm3bQ6ZPY7 1562 aa21.97■■□□□ 1.11
Vcan-201ENSMUST00000109543 Pkd2O35245 966 aa21.97■■□□□ 1.11
Vcan-201ENSMUST00000109543 Zcchc11B2RX14 1644 aaKnown RBP21.97■■□□□ 1.11
Vcan-201ENSMUST00000109543 Sin3aQ60520 1274 aaKnown RBP21.96■■□□□ 1.11
Vcan-201ENSMUST00000109543 Fam163aQ8CAA5 168 aa21.96■■□□□ 1.11
Vcan-201ENSMUST00000109543 Mapkbp1Q6NS57 1503 aa21.96■■□□□ 1.11
Vcan-201ENSMUST00000109543 Prex2Q3LAC4 1598 aa21.96■■□□□ 1.11
Vcan-201ENSMUST00000109543 Dnmt1P13864 1620 aaKnown RBP21.95■■□□□ 1.1
Vcan-201ENSMUST00000109543 Adgrb2Q8CGM1 1561 aa21.95■■□□□ 1.1
Vcan-201ENSMUST00000109543 Neo1P97798 1493 aa21.93■■□□□ 1.1
Vcan-201ENSMUST00000109543 Usp47Q8BY87 1376 aa21.93■■□□□ 1.1
Vcan-201ENSMUST00000109543 Rprd2Q6NXI6 1469 aaKnown RBP21.9■■□□□ 1.1
Vcan-201ENSMUST00000109543 Fkbp15Q6P9Q6 1216 aaKnown RBP21.9■■□□□ 1.1
Vcan-201ENSMUST00000109543 Eif4g3Q80XI3 1579 aaKnown RBP21.9■■□□□ 1.1
Vcan-201ENSMUST00000109543 Jph4Q80WT0 628 aa21.9■■□□□ 1.1
Vcan-201ENSMUST00000109543 AlkP97793 1621 aa21.89■■□□□ 1.09
Vcan-201ENSMUST00000109543 Tdrd9Q14BI7 1383 aa21.88■■□□□ 1.09
Vcan-201ENSMUST00000109543 Lamc1P02468 1607 aaKnown RBP21.88■■□□□ 1.09
Vcan-201ENSMUST00000109543 Mlh3A0A1Y7VMP7 1443 aa21.86■■□□□ 1.09
Vcan-201ENSMUST00000109543 Arhgef12Q8R4H2 1543 aaKnown RBP21.86■■□□□ 1.09
Vcan-201ENSMUST00000109543 AknaQ80VW7 1404 aa21.85■■□□□ 1.09
Vcan-201ENSMUST00000109543 Pik3c2gO70167 1506 aa21.82■■□□□ 1.08
Vcan-201ENSMUST00000109543 Kif21bQ9QXL1 1668 aa21.82■■□□□ 1.08
Vcan-201ENSMUST00000109543 Caskin1Q6P9K8 1431 aa21.82■■□□□ 1.08
Vcan-201ENSMUST00000109543 Pprc1Q6NZN1 1644 aa21.82■■□□□ 1.08
Vcan-201ENSMUST00000109543 Rrbp1Q99PL5 1605 aaKnown RBP21.81■■□□□ 1.08
Vcan-201ENSMUST00000109543 1700123L14RikQ3V2K7 440 aa21.8■■□□□ 1.08
Vcan-201ENSMUST00000109543 Fgd6Q69ZL1 1399 aa21.8■■□□□ 1.08
Vcan-201ENSMUST00000109543 Fancd2Q80V62 1450 aa21.78■■□□□ 1.08
Vcan-201ENSMUST00000109543 Ttll5Q8CHB8 1328 aa21.78■■□□□ 1.08
Vcan-201ENSMUST00000109543 Dhx9O70133 1380 aaKnown RBP21.76■■□□□ 1.07
Vcan-201ENSMUST00000109543 Smg6P61406 1418 aaKnown RBP21.75■■□□□ 1.07
Vcan-201ENSMUST00000109543 Stra8P70278 393 aa21.75■■□□□ 1.07
Vcan-201ENSMUST00000109543 Supt6hQ62383 1726 aaKnown RBP21.75■■□□□ 1.07
Vcan-201ENSMUST00000109543 Trak1Q6PD31 939 aa21.72■■□□□ 1.07
Vcan-201ENSMUST00000109543 Fam208aQ69ZR9 1610 aaKnown RBP21.72■■□□□ 1.07
Vcan-201ENSMUST00000109543 Nup155Q99P88 1391 aaKnown RBP21.72■■□□□ 1.07
Vcan-201ENSMUST00000109543 Trpm2Q91YD4 1506 aa21.7■■□□□ 1.07
Vcan-201ENSMUST00000109543 Ncoa1P70365 1447 aa21.7■■□□□ 1.06
Vcan-201ENSMUST00000109543 Tnnt3Q9QZ47 272 aa21.7■■□□□ 1.06
Vcan-201ENSMUST00000109543 Fmn2Q9JL04 1578 aa21.69■■□□□ 1.06
Vcan-201ENSMUST00000109543 Hnrnpul2Q00PI9 745 aaKnown RBP21.68■■□□□ 1.06
Vcan-201ENSMUST00000109543 Aplp2Q06335 707 aa21.68■■□□□ 1.06
Vcan-201ENSMUST00000109543 Kif14L0N7N1 1674 aaKnown RBP21.68■■□□□ 1.06
Vcan-201ENSMUST00000109543 Rgl3Q3UYI5 709 aa21.68■■□□□ 1.06
Vcan-201ENSMUST00000109543 Gm14025A2AP89 1413 aa21.67■■□□□ 1.06
Vcan-201ENSMUST00000109543 Znf710Q3U288 666 aa21.67■■□□□ 1.06
Vcan-201ENSMUST00000109543 Map4P27546 1125 aaKnown RBP21.64■■□□□ 1.06
Vcan-201ENSMUST00000109543 Arhgap5P97393 1501 aa21.64■■□□□ 1.05
Vcan-201ENSMUST00000109543 Wdr7Q920I9 1489 aa21.62■■□□□ 1.05
Vcan-201ENSMUST00000109543 Mbd5B1AYB6 1498 aa21.61■■□□□ 1.05
Vcan-201ENSMUST00000109543 Adgrl2Q8JZZ7 1487 aa21.6■■□□□ 1.05
Vcan-201ENSMUST00000109543 Gm32742A0A1B0GT42 1604 aa21.59■■□□□ 1.05
Vcan-201ENSMUST00000109543 Rrp7aQ9D1C9 280 aaKnown RBP21.59■■□□□ 1.05
Vcan-201ENSMUST00000109543 Trappc8E9PWG2 1437 aa21.59■■□□□ 1.05
Vcan-201ENSMUST00000109543 Dapk1Q80YE7 1442 aa21.58■■□□□ 1.05
Vcan-201ENSMUST00000109543 Rnf17Q99MV7 1640 aa21.58■■□□□ 1.04
Vcan-201ENSMUST00000109543 DroshaQ5HZJ0 1373 aaKnown RBP21.57■■□□□ 1.04
Vcan-201ENSMUST00000109543 Lrrc9Q8CDN9 1456 aa21.57■■□□□ 1.04
Vcan-201ENSMUST00000109543 Zbtb7cQ8VCZ7 619 aa21.57■■□□□ 1.04
Vcan-201ENSMUST00000109543 Ssh2Q5SW75 1423 aa21.56■■□□□ 1.04
Vcan-201ENSMUST00000109543 Gm38655A0A286YDK6 273 aa21.56■■□□□ 1.04
Vcan-201ENSMUST00000109543 Mug2P28666 1451 aa21.55■■□□□ 1.04
Vcan-201ENSMUST00000109543 Abcc1O35379 1528 aa21.55■■□□□ 1.04
Vcan-201ENSMUST00000109543 Sart1Q9Z315 806 aaKnown RBP21.55■■□□□ 1.04
Vcan-201ENSMUST00000109543 Slc24a1Q91WD8 1130 aa21.54■■□□□ 1.04
Vcan-201ENSMUST00000109543 Rundc1Q0VDN7 615 aa21.54■■□□□ 1.04
Vcan-201ENSMUST00000109543 NhsB1AV60 1647 aa21.53■■□□□ 1.04
Vcan-201ENSMUST00000109543 Mast1Q9R1L5 1570 aa21.52■■□□□ 1.04
Vcan-201ENSMUST00000109543 PtprgQ05909 1442 aa21.52■■□□□ 1.03
Vcan-201ENSMUST00000109543 Cwc22Q8C5N3 908 aaKnown RBP21.51■■□□□ 1.03
Vcan-201ENSMUST00000109543 Chd1P40201 1711 aa21.51■■□□□ 1.03
Vcan-201ENSMUST00000109543 Cfap74Q3UY96 1578 aa21.5■■□□□ 1.03
Vcan-201ENSMUST00000109543 Grwd1Q810D6 446 aaKnown RBP21.5■■□□□ 1.03
Vcan-201ENSMUST00000109543 Clstn2Q9ER65 966 aa21.5■■□□□ 1.03
Vcan-201ENSMUST00000109543 Asxl1P59598 1514 aa21.5■■□□□ 1.03
Vcan-201ENSMUST00000109543 Kiaa1210E9Q0C6 1637 aa21.49■■□□□ 1.03
Vcan-201ENSMUST00000109543 Gm13695A2AK44 830 aa21.49■■□□□ 1.03
Vcan-201ENSMUST00000109543 Card11Q8CIS0 1159 aa21.49■■□□□ 1.03
Vcan-201ENSMUST00000109543 Cdk13Q69ZA1 1511 aaKnown RBP21.48■■□□□ 1.03
Vcan-201ENSMUST00000109543 Dot1lQ6XZL8 1540 aa21.48■■□□□ 1.03
Vcan-201ENSMUST00000109543 Pdcd11Q6NS46 1862 aaKnown RBP21.47■■□□□ 1.03
Vcan-201ENSMUST00000109543 Myom3A2ABU4 1439 aa21.47■■□□□ 1.03
Vcan-201ENSMUST00000109543 Naip6Q9JIB6 1403 aa21.47■■□□□ 1.03
Vcan-201ENSMUST00000109543 Mrs2Q5NCE8 434 aa21.46■■□□□ 1.03
Vcan-201ENSMUST00000109543 Neurl4Q5NCX5 1563 aa21.45■■□□□ 1.02
Retrieved 100 of 22,080 RNA–protein pairs in 31 ms