RNA–Protein interactions for RNA: ENSMUST00000081170.8

Sgcb-201, Transcript of Beta-sarcoglycan, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sgcb, Length 3,786 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sgcb-201ENSMUST00000081170 Rpap1Q80TE0 1409 aa15.36■□□□□ 0.05
Sgcb-201ENSMUST00000081170 Zfp91Q62511 572 aa15.36■□□□□ 0.05
Sgcb-201ENSMUST00000081170 Kcnn1Q9EQR3 537 aa15.36■□□□□ 0.05
Sgcb-201ENSMUST00000081170 Exoc6Q8R313 802 aa15.35■□□□□ 0.05
Sgcb-201ENSMUST00000081170 Samd9lQ69Z37 1561 aa15.34■□□□□ 0.05
Sgcb-201ENSMUST00000081170 Stard8Q8K031 1019 aa15.34■□□□□ 0.05
Sgcb-201ENSMUST00000081170 BccipQ9CWI3 316 aa15.34■□□□□ 0.05
Sgcb-201ENSMUST00000081170 LrpprcQ6PB66 1392 aaKnown RBP15.34■□□□□ 0.05
Sgcb-201ENSMUST00000081170 Plb1Q3TTY0 1478 aa15.34■□□□□ 0.05
Sgcb-201ENSMUST00000081170 Ift140E9PY46 1464 aa15.33■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Hsp90ab1P11499 724 aaKnown RBP15.32■□□□□ 0.04
Sgcb-201ENSMUST00000081170 DekQ7TNV0 380 aaKnown RBP15.32■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Gtf2a1Q99PM3 378 aa15.32■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Dnai1Q8C0M8 701 aa15.32■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Dhx29Q6PGC1 1365 aaKnown RBP15.31■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Paxip1Q6NZQ4 1056 aa15.29■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Plcd3Q8K2J0 785 aa15.29■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Trim44Q9QXA7 346 aa15.29■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Nup160Q9Z0W3 1402 aaKnown RBP15.29■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Gm6268A2A3U9 297 aa15.28■□□□□ 0.04
Sgcb-201ENSMUST00000081170 NrkQ9R0G8 1455 aa15.28■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Duox2A2AQ99 1517 aa15.27■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Mroh3A0A1D5RM54 893 aa15.27■□□□□ 0.04
Sgcb-201ENSMUST00000081170 Tnnt2P50752 301 aa15.27■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Znf316Q6PGE4 1016 aa15.27■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Disp1Q3TDN0 1521 aa15.27■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Rangap1P46061 589 aaKnown RBP15.24■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Rrp9Q91WM3 475 aaKnown RBP15.24■□□□□ 0.03
Sgcb-201ENSMUST00000081170 SlkO54988 1233 aa15.23■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Plcb2A3KGF7 1181 aa15.23■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Eif2s2Q99L45 331 aaKnown RBP15.23■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Efcab5A0JP43 1406 aa15.22■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Magi3Q9EQJ9 1476 aa15.21■□□□□ 0.03
Sgcb-201ENSMUST00000081170 Zcchc11B2RX14 1644 aaKnown RBP15.21■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Cers3Q1A3B0 383 aa15.19■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Smg6P61406 1418 aaKnown RBP15.18■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Eif4g1Q6NZJ6 1600 aaKnown RBP15.18■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Slc4a2P13808 1237 aaKnown RBP15.18■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Gm13697A2AK42 830 aa15.18■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Prdm10Q3UTQ7 1184 aa15.18■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Fbxo2Q80UW2 297 aa15.18■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Chic2Q9D9G3 165 aa15.17■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Col17a1Q07563 1470 aa15.16■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Polr3glQ8R0C0 218 aa15.15■□□□□ 0.02
Sgcb-201ENSMUST00000081170 Erich6bQ9D4S6 220 aa15.14■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Chmp5Q9D7S9 219 aa15.14■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Ppm1gQ61074 542 aa15.13■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Shroom4Q1W617 1475 aa15.13■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Fkbp15Q6P9Q6 1216 aaKnown RBP15.12■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Ttll13A4Q9F6 804 aa15.12■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Adamts12Q811B3 1600 aa15.1■□□□□ 0.01
Sgcb-201ENSMUST00000081170 SynmQ70IV5 1561 aa15.1■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Rrp12Q6P5B0 1295 aaKnown RBP15.09■□□□□ 0.01
Sgcb-201ENSMUST00000081170 Cc2d2bA0A286YDU8 1405 aa15.09■□□□□ 0.01
Sgcb-201ENSMUST00000081170 AqrQ8CFQ3 1481 aaKnown RBP15.08■□□□□ 0
Sgcb-201ENSMUST00000081170 Dnajc5P60904 198 aa15.08■□□□□ 0
Sgcb-201ENSMUST00000081170 Pdia4P08003 638 aaKnown RBP15.08■□□□□ 0
Sgcb-201ENSMUST00000081170 Podxl2Q8CAE9 603 aa15.08■□□□□ 0
Sgcb-201ENSMUST00000081170 Htatsf1Q8BGC0 757 aa15.07■□□□□ 0
Sgcb-201ENSMUST00000081170 Pla2r1Q62028 1487 aa15.07■□□□□ 0
Sgcb-201ENSMUST00000081170 L3mbtl2P59178 703 aa15.07■□□□□ 0
Sgcb-201ENSMUST00000081170 Abca16E9PWJ7 1678 aa15.07■□□□□ 0
Sgcb-201ENSMUST00000081170 Ubap1lG3UW59 384 aa15.07■□□□□ 0
Sgcb-201ENSMUST00000081170 Grin2aP35436 1464 aa15.06■□□□□ 0
Sgcb-201ENSMUST00000081170 Scaf1Q5U4C3 1256 aaKnown RBP15.06■□□□□ 0
Sgcb-201ENSMUST00000081170 Npm1Q61937 292 aaKnown RBP15.06■□□□□ 0
Sgcb-201ENSMUST00000081170 Dnmt1P13864 1620 aaKnown RBP15.06■□□□□ 0
Sgcb-201ENSMUST00000081170 Chd1P40201 1711 aa15.05■□□□□ 0
Sgcb-201ENSMUST00000081170 Samd1D3YXK1 519 aa15.05■□□□□ -0
Sgcb-201ENSMUST00000081170 Mre11Q61216 706 aa15.05■□□□□ -0
Sgcb-201ENSMUST00000081170 Dusp27Q148W8 1138 aa15.04■□□□□ -0
Sgcb-201ENSMUST00000081170 Znf326O88291 580 aa15.04■□□□□ -0
Sgcb-201ENSMUST00000081170 PtprkP35822 1457 aa15.04■□□□□ -0
Sgcb-201ENSMUST00000081170 Fam43aQ8BUP8 424 aa15.03■□□□□ -0
Sgcb-201ENSMUST00000081170 AcrbpQ3V140 540 aa15.03■□□□□ -0
Sgcb-201ENSMUST00000081170 NudcO35685 332 aaKnown RBP15.02■□□□□ -0
Sgcb-201ENSMUST00000081170 Abcc2Q8VI47 1543 aa15.01□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Zhx1P70121 873 aa15.01□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Map3k4O08648 1597 aa15.01□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Irf5P56477 497 aa14.99□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Chmp4bQ9D8B3 224 aaKnown RBP14.98□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Neurod2Q62414 383 aa14.98□□□□□ -0.01
Sgcb-201ENSMUST00000081170 EprsQ8CGC7 1512 aaKnown RBP14.97□□□□□ -0.01
Sgcb-201ENSMUST00000081170 PtmaP26350 111 aa14.97□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Ak7Q9D2H2 614 aa14.97□□□□□ -0.01
Sgcb-201ENSMUST00000081170 BlmO88700 1416 aa14.97□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Dhx30Q99PU8 1217 aaKnown RBP14.96□□□□□ -0.01
Sgcb-201ENSMUST00000081170 EspnQ9ET47 871 aa14.96□□□□□ -0.01
Sgcb-201ENSMUST00000081170 Map3k1P53349 1493 aa14.95□□□□□ -0.02
Sgcb-201ENSMUST00000081170 Abca5Q8K448 1642 aa14.95□□□□□ -0.02
Sgcb-201ENSMUST00000081170 MpndQ3TV65 487 aa14.95□□□□□ -0.02
Sgcb-201ENSMUST00000081170 PogkQ80TC5 607 aa14.95□□□□□ -0.02
Sgcb-201ENSMUST00000081170 BC005561E9Q5E2 1589 aa14.94□□□□□ -0.02
Sgcb-201ENSMUST00000081170 Fam13bQ8K2H3 851 aa14.94□□□□□ -0.02
Sgcb-201ENSMUST00000081170 Mroh2bQ7M6Y6 1581 aa14.93□□□□□ -0.02
Sgcb-201ENSMUST00000081170 Aebp1Q640N1 1128 aa14.92□□□□□ -0.02
Sgcb-201ENSMUST00000081170 Ipo8Q7TMY7 1010 aa14.9□□□□□ -0.02
Sgcb-201ENSMUST00000081170 Nectin2P32507 530 aa14.9□□□□□ -0.02
Sgcb-201ENSMUST00000081170 VgfQ0VGU4 617 aa14.9□□□□□ -0.02
Sgcb-201ENSMUST00000081170 Rad54l2Q99NG0 1466 aa14.9□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 75.7 ms