RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Znf710Q3U288 666 aa16.03■□□□□ 0.16
Trim23-203ENSMUST00000069187 Ncoa3O09000 1398 aa16.01■□□□□ 0.15
Trim23-203ENSMUST00000069187 Abcc1O35379 1528 aa16.01■□□□□ 0.15
Trim23-203ENSMUST00000069187 Arhgef12Q8R4H2 1543 aaKnown RBP16■□□□□ 0.15
Trim23-203ENSMUST00000069187 Magi1Q6RHR9 1471 aa16■□□□□ 0.15
Trim23-203ENSMUST00000069187 NclP09405 707 aaKnown RBP15.99■□□□□ 0.15
Trim23-203ENSMUST00000069187 Mia2Q91ZV0 1396 aa15.98■□□□□ 0.15
Trim23-203ENSMUST00000069187 Fam163aQ8CAA5 168 aa15.97■□□□□ 0.15
Trim23-203ENSMUST00000069187 3425401B19RikD3Z1D3 1412 aa15.96■□□□□ 0.15
Trim23-203ENSMUST00000069187 Lmtk2Q3TYD6 1471 aa15.95■□□□□ 0.14
Trim23-203ENSMUST00000069187 Eid3Q3V124 375 aa15.94■□□□□ 0.14
Trim23-203ENSMUST00000069187 Mtus2Q3UHD3 1353 aa15.94■□□□□ 0.14
Trim23-203ENSMUST00000069187 Arhgef11Q68FM7 1552 aa15.93■□□□□ 0.14
Trim23-203ENSMUST00000069187 Rrbp1Q99PL5 1605 aaKnown RBP15.93■□□□□ 0.14
Trim23-203ENSMUST00000069187 Ccer2J3QPU5 274 aa15.91■□□□□ 0.14
Trim23-203ENSMUST00000069187 Cabp1Q9JLK7 227 aa15.9■□□□□ 0.14
Trim23-203ENSMUST00000069187 Ythdc2B2RR83 1445 aaKnown RBP15.9■□□□□ 0.14
Trim23-203ENSMUST00000069187 Plekhh2Q8C115 1491 aa15.9■□□□□ 0.14
Trim23-203ENSMUST00000069187 A2mQ6GQT1 1474 aa15.89■□□□□ 0.13
Trim23-203ENSMUST00000069187 UacaQ8CGB3 1411 aa15.89■□□□□ 0.13
Trim23-203ENSMUST00000069187 Fancd2Q80V62 1450 aa15.89■□□□□ 0.13
Trim23-203ENSMUST00000069187 Prex2Q3LAC4 1598 aa15.89■□□□□ 0.13
Trim23-203ENSMUST00000069187 Calr4Q3TQS0 420 aa15.88■□□□□ 0.13
Trim23-203ENSMUST00000069187 Tdrd9Q14BI7 1383 aa15.87■□□□□ 0.13
Trim23-203ENSMUST00000069187 Arid3cA6PWV5 409 aa15.86■□□□□ 0.13
Trim23-203ENSMUST00000069187 Gcc2Q8CHG3 1679 aa15.86■□□□□ 0.13
Trim23-203ENSMUST00000069187 Fhad1A6PWD2 1420 aa15.86■□□□□ 0.13
Trim23-203ENSMUST00000069187 Gapvd1Q6PAR5 1458 aa15.85■□□□□ 0.13
Trim23-203ENSMUST00000069187 Naip2Q9QUK4 1447 aa15.85■□□□□ 0.13
Trim23-203ENSMUST00000069187 Mroh2aD3Z750 1679 aa15.85■□□□□ 0.13
Trim23-203ENSMUST00000069187 Kiaa1551Q5DTW7 1521 aa15.83■□□□□ 0.12
Trim23-203ENSMUST00000069187 Igf1rQ60751 1373 aa15.83■□□□□ 0.12
Trim23-203ENSMUST00000069187 Nolc1E9Q5C9 702 aaKnown RBP15.82■□□□□ 0.12
Trim23-203ENSMUST00000069187 Vps8Q0P5W1 1427 aa15.82■□□□□ 0.12
Trim23-203ENSMUST00000069187 Mapkbp1Q6NS57 1503 aa15.82■□□□□ 0.12
Trim23-203ENSMUST00000069187 Abcc5Q9R1X5 1436 aa15.81■□□□□ 0.12
Trim23-203ENSMUST00000069187 Gm13697A2AK42 830 aa15.8■□□□□ 0.12
Trim23-203ENSMUST00000069187 Chd1P40201 1711 aa15.8■□□□□ 0.12
Trim23-203ENSMUST00000069187 Zcchc11B2RX14 1644 aaKnown RBP15.8■□□□□ 0.12
Trim23-203ENSMUST00000069187 Arhgef40Q3UPH7 1517 aa15.8■□□□□ 0.12
Trim23-203ENSMUST00000069187 Mlh3A0A1Y7VMP7 1443 aa15.8■□□□□ 0.12
Trim23-203ENSMUST00000069187 Atp10dQ8K2X1 1416 aa15.79■□□□□ 0.12
Trim23-203ENSMUST00000069187 Cdc42bpaQ3UU96 1719 aa15.79■□□□□ 0.12
Trim23-203ENSMUST00000069187 Arhgap5P97393 1501 aa15.79■□□□□ 0.12
Trim23-203ENSMUST00000069187 Adcy10Q8C0T9 1614 aa15.79■□□□□ 0.12
Trim23-203ENSMUST00000069187 Supt16hQ920B9 1047 aa15.78■□□□□ 0.12
Trim23-203ENSMUST00000069187 Zbtb7cQ8VCZ7 619 aa15.77■□□□□ 0.12
Trim23-203ENSMUST00000069187 Camsap2Q8C1B1 1461 aa15.77■□□□□ 0.12
Trim23-203ENSMUST00000069187 Ankrd36D3Z4K0 1415 aa15.77■□□□□ 0.11
Trim23-203ENSMUST00000069187 Caskin1Q6P9K8 1431 aa15.76■□□□□ 0.11
Trim23-203ENSMUST00000069187 Washc2Q6PGL7 1334 aa15.75■□□□□ 0.11
Trim23-203ENSMUST00000069187 PrkcshO08795 521 aa15.75■□□□□ 0.11
Trim23-203ENSMUST00000069187 Ttbk1Q6PCN3 1308 aa15.75■□□□□ 0.11
Trim23-203ENSMUST00000069187 Rrp7aQ9D1C9 280 aaKnown RBP15.74■□□□□ 0.11
Trim23-203ENSMUST00000069187 PtprtQ99M80 1454 aa15.74■□□□□ 0.11
Trim23-203ENSMUST00000069187 Sart1Q9Z315 806 aaKnown RBP15.74■□□□□ 0.11
Trim23-203ENSMUST00000069187 Gm156Q58A37 223 aa15.73■□□□□ 0.11
Trim23-203ENSMUST00000069187 Il16O54824 1322 aa15.72■□□□□ 0.11
Trim23-203ENSMUST00000069187 Wdr7Q920I9 1489 aa15.72■□□□□ 0.11
Trim23-203ENSMUST00000069187 Cep170Q6A065 1588 aa15.71■□□□□ 0.11
Trim23-203ENSMUST00000069187 Rfx7F8VPJ6 1459 aa15.7■□□□□ 0.1
Trim23-203ENSMUST00000069187 Smg6P61406 1418 aaKnown RBP15.69■□□□□ 0.1
Trim23-203ENSMUST00000069187 AI481877A2ALV5 1481 aa15.69■□□□□ 0.1
Trim23-203ENSMUST00000069187 Kdm6bQ5NCY0 1641 aa15.68■□□□□ 0.1
Trim23-203ENSMUST00000069187 NhsB1AV60 1647 aa15.68■□□□□ 0.1
Trim23-203ENSMUST00000069187 Mphosph9A6H5Y1 991 aa15.68■□□□□ 0.1
Trim23-203ENSMUST00000069187 Wdr43Q6ZQL4 677 aaKnown RBP15.67■□□□□ 0.1
Trim23-203ENSMUST00000069187 Znf608Q56A10 1511 aa15.67■□□□□ 0.1
Trim23-203ENSMUST00000069187 Ppp1r18Q8BQ30 594 aa15.65■□□□□ 0.1
Trim23-203ENSMUST00000069187 Zfp644E9QA22 1323 aa15.65■□□□□ 0.1
Trim23-203ENSMUST00000069187 Clstn2Q9ER65 966 aa15.65■□□□□ 0.1
Trim23-203ENSMUST00000069187 Lemd3Q9WU40 921 aa15.65■□□□□ 0.1
Trim23-203ENSMUST00000069187 Trappc8E9PWG2 1437 aa15.64■□□□□ 0.09
Trim23-203ENSMUST00000069187 Fam208aQ69ZR9 1610 aaKnown RBP15.64■□□□□ 0.09
Trim23-203ENSMUST00000069187 Hspa5P20029 655 aaKnown RBP15.64■□□□□ 0.09
Trim23-203ENSMUST00000069187 Cul7Q8VE73 1689 aa15.62■□□□□ 0.09
Trim23-203ENSMUST00000069187 Kiaa1210E9Q0C6 1637 aa15.62■□□□□ 0.09
Trim23-203ENSMUST00000069187 Adgrl3Q80TS3 1537 aa15.61■□□□□ 0.09
Trim23-203ENSMUST00000069187 Lrrc9Q8CDN9 1456 aa15.61■□□□□ 0.09
Trim23-203ENSMUST00000069187 Map4P27546 1125 aaKnown RBP15.61■□□□□ 0.09
Trim23-203ENSMUST00000069187 Kdm3bQ6ZPY7 1562 aa15.61■□□□□ 0.09
Trim23-203ENSMUST00000069187 Nup155Q99P88 1391 aaKnown RBP15.61■□□□□ 0.09
Trim23-203ENSMUST00000069187 Adgrb2Q8CGM1 1561 aa15.6■□□□□ 0.09
Trim23-203ENSMUST00000069187 Pkd2O35245 966 aa15.6■□□□□ 0.09
Trim23-203ENSMUST00000069187 Cfap74Q3UY96 1578 aa15.59■□□□□ 0.09
Trim23-203ENSMUST00000069187 Ppp4r2Q0VGB7 417 aa15.59■□□□□ 0.09
Trim23-203ENSMUST00000069187 Ccdc9Q8VC31 543 aaKnown RBP15.59■□□□□ 0.09
Trim23-203ENSMUST00000069187 Abca8bQ8K440 1620 aa15.59■□□□□ 0.09
Trim23-203ENSMUST00000069187 Rnf17Q99MV7 1640 aa15.59■□□□□ 0.09
Trim23-203ENSMUST00000069187 Trak1Q6PD31 939 aa15.57■□□□□ 0.08
Trim23-203ENSMUST00000069187 Prdm16A2A935 1275 aa15.56■□□□□ 0.08
Trim23-203ENSMUST00000069187 Map3k5O35099 1380 aa15.55■□□□□ 0.08
Trim23-203ENSMUST00000069187 Ccdc27Q3V036 639 aa15.55■□□□□ 0.08
Trim23-203ENSMUST00000069187 SphkapQ6NSW3 1687 aa15.54■□□□□ 0.08
Trim23-203ENSMUST00000069187 Spag9Q58A65 1321 aaKnown RBP15.54■□□□□ 0.08
Trim23-203ENSMUST00000069187 Dennd4bQ3U1Y4 1499 aa15.53■□□□□ 0.08
Trim23-203ENSMUST00000069187 Upf2A2AT37 1269 aaKnown RBP15.52■□□□□ 0.08
Trim23-203ENSMUST00000069187 Fmn2Q9JL04 1578 aa15.51■□□□□ 0.07
Trim23-203ENSMUST00000069187 Gm32742A0A1B0GT42 1604 aa15.51■□□□□ 0.07
Trim23-203ENSMUST00000069187 Amer1Q7TS75 1132 aa15.51■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 104.3 ms