RNA–Protein interactions for RNA: ENSMUST00000042012.6

Sf3b3-201, Transcript of Splicing factor 3B subunit 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b3, Length 4,525 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3-201ENSMUST00000042012 Znf316Q6PGE4 1016 aa12.15□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Wdr62Q3U3T8 1523 aa12.15□□□□□ -0.46
Sf3b3-201ENSMUST00000042012 Atf3Q60765 181 aa12.14□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Rapgef2Q8CHG7 1496 aa12.13□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Eif4g2Q62448 906 aaKnown RBP12.13□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Rtn4Q99P72 1162 aaKnown RBP12.12□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Mrs2Q5NCE8 434 aa12.12□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 PtprkP35822 1457 aa12.11□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Ubap1lG3UW59 384 aa12.11□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Arhgap31A6X8Z5 1425 aa12.11□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Igf1rQ60751 1373 aa12.1□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 CenpbP27790 599 aa12.09□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Pak3Q61036 559 aa12.09□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Shq1Q7TMX5 569 aa12.09□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Polr1aO35134 1717 aaKnown RBP12.09□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Prdm16A2A935 1275 aa12.09□□□□□ -0.47
Sf3b3-201ENSMUST00000042012 Arhgap35Q91YM2 1499 aa12.08□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Upf2A2AT37 1269 aaKnown RBP12.08□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Mphosph9A6H5Y1 991 aa12.08□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Trim26Q99PN3 545 aa12.08□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Afap1Q80YS6 731 aa12.07□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Ciz1Q8VEH2 845 aa12.07□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Birc3O08863 600 aa12.07□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Fan1Q69ZT1 1020 aa12.06□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Stard8Q8K031 1019 aa12.06□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Rtf1A2AQ19 715 aaKnown RBP12.05□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Gm156Q58A37 223 aa12.05□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 GphnQ8BUV3 769 aaKnown RBP12.05□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 1700019A02RikA0A087WPV9 146 aa12.04□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Sirt1Q923E4 737 aa12.04□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Srcin1Q9QWI6 1250 aa12.04□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Fhad1A6PWD2 1420 aa12.04□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 NrkQ9R0G8 1455 aa12.03□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 CenpjQ569L8 1344 aa12.03□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Grin2bQ01097 1482 aa12.03□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Crocc2F6XLV1 1638 aa12.02□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Gm7298A0A0N4SVU1 1476 aa12.02□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Top2aQ01320 1528 aaKnown RBP12.02□□□□□ -0.48
Sf3b3-201ENSMUST00000042012 Znf326O88291 580 aa12.02□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Fyb1O35601 819 aa12.01□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Rundc1Q0VDN7 615 aa12.01□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 UacaQ8CGB3 1411 aa12.01□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Nsd2Q8BVE8 1365 aa12.01□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Arhgap5P97393 1501 aa12.01□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Evi5lH3BKQ3 813 aa12□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Hspa5P20029 655 aaKnown RBP12□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Cabp4Q8VHC5 271 aa12□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Neo1P97798 1493 aa11.99□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Map3k5O35099 1380 aa11.99□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 NudcO35685 332 aaKnown RBP11.99□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Sf3b2Q3UJB0 878 aaKnown RBP11.99□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 ErbinQ80TH2 1402 aa11.99□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Dmrt2Q8BG36 561 aa11.98□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Plin1Q8CGN5 517 aa11.98□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Fam163aQ8CAA5 168 aa11.98□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Ccdc141E9Q8Q6 1531 aa11.98□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Supt5hO55201 1082 aaKnown RBP11.96□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 Pde4cQ3UEI1 686 aa11.96□□□□□ -0.49
Sf3b3-201ENSMUST00000042012 EprsQ8CGC7 1512 aaKnown RBP11.96□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Gm6268A2A3U9 297 aa11.95□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Tmf1B9EKI3 1091 aa11.94□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Ddx54Q8K4L0 874 aaKnown RBP11.94□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Mink1Q9JM52 1308 aa11.93□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Lamc3Q9R0B6 1581 aa11.93□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Rock2P70336 1388 aa11.93□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Pcgf6Q99NA9 353 aa11.93□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Gm21190A0A0G2JGJ6 266 aa11.92□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Q9D9H8 365 aa11.92□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Nol10Q5RJG1 687 aaKnown RBP11.91□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Ythdc1E9Q5K9 736 aaKnown RBP11.91□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Dcaf11Q91VU6 549 aa11.91□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Neurod2Q62414 383 aa11.9□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Chrna2Q91X60 512 aa11.9□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 Ythdc2B2RR83 1445 aaKnown RBP11.9□□□□□ -0.5
Sf3b3-201ENSMUST00000042012 U2af1Q9D883 239 aaKnown RBP11.89□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 TchhA0A0B4J1F9 1599 aa11.89□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Usp40Q8BWR4 1235 aa11.89□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Q3TQI7 289 aaKnown RBP11.89□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Slc5a4bQ91ZP4 660 aa11.89□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 A2mQ6GQT1 1474 aa11.88□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Chmp4bQ9D8B3 224 aaKnown RBP11.88□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Grin2aP35436 1464 aa11.88□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Camsap1A2AHC3 1581 aa11.87□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 U2surpQ6NV83 1029 aaKnown RBP11.87□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Csrnp3P59055 597 aa11.86□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Mroh2bQ7M6Y6 1581 aa11.85□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Fam135aQ6NS59 1506 aa11.85□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Sugp2Q8CH09 1067 aa11.84□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Cux1P53564 1515 aa11.84□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Tnnt1O88346 262 aa11.84□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 TatQ8QZR1 454 aa11.84□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Chmp7Q8R1T1 451 aa11.83□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Atp2b2Q9R0K7 1198 aa11.83□□□□□ -0.51
Sf3b3-201ENSMUST00000042012 Tom1O88746 492 aa11.83□□□□□ -0.52
Sf3b3-201ENSMUST00000042012 Slc4a1apE9PX68 744 aa11.82□□□□□ -0.52
Sf3b3-201ENSMUST00000042012 Gapvd1Q6PAR5 1458 aa11.82□□□□□ -0.52
Sf3b3-201ENSMUST00000042012 Zpr1Q62384 459 aa11.81□□□□□ -0.52
Sf3b3-201ENSMUST00000042012 Atp10dQ8K2X1 1416 aa11.81□□□□□ -0.52
Sf3b3-201ENSMUST00000042012 Map3k1P53349 1493 aa11.81□□□□□ -0.52
Sf3b3-201ENSMUST00000042012 Gsto1O09131 240 aa11.81□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 1966.8 ms