RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 Supt16hQ920B9 1047 aa24.36■■□□□ 1.49
Ptpra-201ENSMUST00000028769 Plb1Q3TTY0 1478 aa24.36■■□□□ 1.49
Ptpra-201ENSMUST00000028769 Rundc1Q0VDN7 615 aa24.35■■□□□ 1.49
Ptpra-201ENSMUST00000028769 Dhx9O70133 1380 aaKnown RBP24.35■■□□□ 1.49
Ptpra-201ENSMUST00000028769 Peg3Q3URU2 1571 aa24.34■■□□□ 1.49
Ptpra-201ENSMUST00000028769 Abcc5Q9R1X5 1436 aa24.33■■□□□ 1.49
Ptpra-201ENSMUST00000028769 Ift140E9PY46 1464 aa24.31■■□□□ 1.48
Ptpra-201ENSMUST00000028769 PxdnQ3UQ28 1475 aa24.3■■□□□ 1.48
Ptpra-201ENSMUST00000028769 Plekhh2Q8C115 1491 aa24.29■■□□□ 1.48
Ptpra-201ENSMUST00000028769 Grin2aP35436 1464 aa24.29■■□□□ 1.48
Ptpra-201ENSMUST00000028769 Ncoa3O09000 1398 aa24.29■■□□□ 1.48
Ptpra-201ENSMUST00000028769 Card11Q8CIS0 1159 aa24.27■■□□□ 1.48
Ptpra-201ENSMUST00000028769 Kcnh8P59111 1102 aa24.26■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Ofd1Q80Z25 1017 aa24.26■■□□□ 1.47
Ptpra-201ENSMUST00000028769 WizO88286 1684 aaKnown RBP24.26■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Magi3Q9EQJ9 1476 aa24.25■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Mug1P28665 1476 aa24.25■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Gm13695A2AK44 830 aa24.25■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Lmtk2Q3TYD6 1471 aa24.24■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Arhgef40Q3UPH7 1517 aa24.23■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Ttll5Q8CHB8 1328 aa24.23■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Pak3Q61036 559 aa24.22■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Kif21aQ9QXL2 1672 aa24.21■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Ttbk1Q6PCN3 1308 aa24.21■■□□□ 1.47
Ptpra-201ENSMUST00000028769 Rad21Q61550 635 aaKnown RBP24.2■■□□□ 1.46
Ptpra-201ENSMUST00000028769 Ncoa1P70365 1447 aa24.18■■□□□ 1.46
Ptpra-201ENSMUST00000028769 Ifnlr1Q8CGK5 535 aa24.18■■□□□ 1.46
Ptpra-201ENSMUST00000028769 Tdrd9Q14BI7 1383 aa24.18■■□□□ 1.46
Ptpra-201ENSMUST00000028769 Fam135aQ6NS59 1506 aa24.17■■□□□ 1.46
Ptpra-201ENSMUST00000028769 Dapk1Q80YE7 1442 aa24.16■■□□□ 1.46
Ptpra-201ENSMUST00000028769 Disp1Q3TDN0 1521 aa24.16■■□□□ 1.46
Ptpra-201ENSMUST00000028769 Cc2d2bA0A286YDU8 1405 aa24.14■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Rprd2Q6NXI6 1469 aaKnown RBP24.14■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Adgrb2Q8CGM1 1561 aa24.13■■□□□ 1.45
Ptpra-201ENSMUST00000028769 PnisrA2AJT4 805 aaKnown RBP24.12■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Map4P27546 1125 aaKnown RBP24.12■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Washc2Q6PGL7 1334 aa24.12■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Kdm6bQ5NCY0 1641 aa24.11■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Camsap2Q8C1B1 1461 aa24.11■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Mrc2Q64449 1479 aa24.1■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Rrp7aQ9D1C9 280 aaKnown RBP24.1■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Soga1E1U8D0 1418 aa24.09■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Abca5Q8K448 1642 aa24.09■■□□□ 1.45
Ptpra-201ENSMUST00000028769 Arhgap31A6X8Z5 1425 aa24.08■■□□□ 1.44
Ptpra-201ENSMUST00000028769 Dhx57Q6P5D3 1388 aaKnown RBP24.07■■□□□ 1.44
Ptpra-201ENSMUST00000028769 Prdm10Q3UTQ7 1184 aa24.06■■□□□ 1.44
Ptpra-201ENSMUST00000028769 Erich6D3Z6S9 713 aa24.05■■□□□ 1.44
Ptpra-201ENSMUST00000028769 Nup155Q99P88 1391 aaKnown RBP24.05■■□□□ 1.44
Ptpra-201ENSMUST00000028769 Cul7Q8VE73 1689 aa24.04■■□□□ 1.44
Ptpra-201ENSMUST00000028769 L3mbtl2P59178 703 aa24.04■■□□□ 1.44
Ptpra-201ENSMUST00000028769 Cwc22Q8C5N3 908 aaKnown RBP24.04■■□□□ 1.44
Ptpra-201ENSMUST00000028769 Pelp1Q9DBD5 1123 aaKnown RBP24.01■■□□□ 1.43
Ptpra-201ENSMUST00000028769 SphkapQ6NSW3 1687 aa24■■□□□ 1.43
Ptpra-201ENSMUST00000028769 Pprc1Q6NZN1 1644 aa24■■□□□ 1.43
Ptpra-201ENSMUST00000028769 Rfx7F8VPJ6 1459 aa23.98■■□□□ 1.43
Ptpra-201ENSMUST00000028769 Rpgrip1lQ8CG73 1264 aa23.98■■□□□ 1.43
Ptpra-201ENSMUST00000028769 Q7TT23 1179 aa23.97■■□□□ 1.43
Ptpra-201ENSMUST00000028769 Bcl11aQ9QYE3 773 aa23.97■■□□□ 1.43
Ptpra-201ENSMUST00000028769 Liat1Q810M6 228 aa23.96■■□□□ 1.43
Ptpra-201ENSMUST00000028769 Gcc2Q8CHG3 1679 aa23.96■■□□□ 1.43
Ptpra-201ENSMUST00000028769 DiexfQ8BTT6 772 aaKnown RBP23.93■■□□□ 1.42
Ptpra-201ENSMUST00000028769 Pik3c2gO70167 1506 aa23.93■■□□□ 1.42
Ptpra-201ENSMUST00000028769 Adamts12Q811B3 1600 aa23.93■■□□□ 1.42
Ptpra-201ENSMUST00000028769 Adcy10Q8C0T9 1614 aa23.93■■□□□ 1.42
Ptpra-201ENSMUST00000028769 Ifit1bl1D3Z6F0 470 aa23.92■■□□□ 1.42
Ptpra-201ENSMUST00000028769 AlkP97793 1621 aa23.91■■□□□ 1.42
Ptpra-201ENSMUST00000028769 Il16O54824 1322 aa23.91■■□□□ 1.42
Ptpra-201ENSMUST00000028769 Kdm2aP59997 1161 aa23.9■■□□□ 1.42
Ptpra-201ENSMUST00000028769 AknaQ80VW7 1404 aa23.88■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Mug2P28666 1451 aa23.87■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Rapgef6Q5NCJ1 1609 aa23.87■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Os9Q8K2C7 672 aa23.87■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Kdm3bQ6ZPY7 1562 aa23.87■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Plekhg5Q66T02 1073 aa23.87■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Cdk13Q69ZA1 1511 aaKnown RBP23.85■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Shroom2A2ALU4 1481 aa23.85■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Fhod3Q76LL6 1578 aa23.85■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Anp32bQ9EST5 272 aaKnown RBP23.85■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Setbp1Q9Z180 1582 aa23.85■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Kif14L0N7N1 1674 aaKnown RBP23.84■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Sart1Q9Z315 806 aaKnown RBP23.84■■□□□ 1.41
Ptpra-201ENSMUST00000028769 Inpp5dQ9ES52 1191 aa23.83■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Apbb1Q9QXJ1 710 aa23.83■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Prex2Q3LAC4 1598 aa23.83■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Wdr7Q920I9 1489 aa23.82■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Abca16E9PWJ7 1678 aa23.82■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Pank3Q8R2W9 370 aa23.81■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Magi1Q6RHR9 1471 aa23.81■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Jph4Q80WT0 628 aa23.8■■□□□ 1.4
Ptpra-201ENSMUST00000028769 NeflP08551 543 aa23.79■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Zfp444Q3TDV8 331 aaKnown RBP23.78■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Egfem1Q8C088 590 aa23.78■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Setd1bQ8CFT2 1985 aa23.78■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Supt6hQ62383 1726 aaKnown RBP23.77■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Rtl5Q5DTT4 599 aa23.77■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Mroh3A0A1D5RM54 893 aa23.77■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Zscan21Q07231 555 aa23.77■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Arhgef11Q68FM7 1552 aa23.77■■□□□ 1.4
Ptpra-201ENSMUST00000028769 Esx1O88933 382 aa23.75■■□□□ 1.39
Ptpra-201ENSMUST00000028769 B4galnt3Q6L8S8 986 aa23.75■■□□□ 1.39
Retrieved 100 of 22,080 RNA–protein pairs in 8.8 ms