RNA–Protein interactions for RNA: ENSMUST00000022356.11

Usp54-201, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-201ENSMUST00000022356 Sart1Q9Z315 806 aaKnown RBP10.38□□□□□ -0.75
Usp54-201ENSMUST00000022356 Sart3Q9JLI8 962 aaKnown RBP10.37□□□□□ -0.75
Usp54-201ENSMUST00000022356 Pak3Q61036 559 aa10.37□□□□□ -0.75
Usp54-201ENSMUST00000022356 Ciz1Q8VEH2 845 aa10.37□□□□□ -0.75
Usp54-201ENSMUST00000022356 Prdm16A2A935 1275 aa10.36□□□□□ -0.75
Usp54-201ENSMUST00000022356 ZgpatQ8VDM1 511 aa10.36□□□□□ -0.75
Usp54-201ENSMUST00000022356 Efcab5A0JP43 1406 aa10.36□□□□□ -0.75
Usp54-201ENSMUST00000022356 Ddx11Q6AXC6 880 aa10.36□□□□□ -0.75
Usp54-201ENSMUST00000022356 Rtn4Q99P72 1162 aaKnown RBP10.36□□□□□ -0.75
Usp54-201ENSMUST00000022356 Nsd2Q8BVE8 1365 aa10.36□□□□□ -0.75
Usp54-201ENSMUST00000022356 GphnQ8BUV3 769 aaKnown RBP10.35□□□□□ -0.75
Usp54-201ENSMUST00000022356 Stk26Q99JT2 416 aa10.35□□□□□ -0.75
Usp54-201ENSMUST00000022356 Pes1Q9EQ61 584 aaKnown RBP10.34□□□□□ -0.75
Usp54-201ENSMUST00000022356 Igf1rQ60751 1373 aa10.34□□□□□ -0.75
Usp54-201ENSMUST00000022356 UacaQ8CGB3 1411 aa10.34□□□□□ -0.75
Usp54-201ENSMUST00000022356 PnnO35691 725 aaKnown RBP10.34□□□□□ -0.75
Usp54-201ENSMUST00000022356 Sox12Q04890 314 aa10.34□□□□□ -0.75
Usp54-201ENSMUST00000022356 Arhgap31A6X8Z5 1425 aa10.33□□□□□ -0.76
Usp54-201ENSMUST00000022356 Ecm2Q5FW85 670 aa10.32□□□□□ -0.76
Usp54-201ENSMUST00000022356 Cep162Q6ZQ06 1403 aa10.32□□□□□ -0.76
Usp54-201ENSMUST00000022356 Fyb1O35601 819 aa10.32□□□□□ -0.76
Usp54-201ENSMUST00000022356 Tmf1B9EKI3 1091 aa10.32□□□□□ -0.76
Usp54-201ENSMUST00000022356 Gm14025A2AP89 1413 aa10.32□□□□□ -0.76
Usp54-201ENSMUST00000022356 Utp14aQ640M1 767 aaKnown RBP10.31□□□□□ -0.76
Usp54-201ENSMUST00000022356 Pip4k2bQ80XI4 416 aa10.31□□□□□ -0.76
Usp54-201ENSMUST00000022356 Zeb2Q9R0G7 1215 aa10.31□□□□□ -0.76
Usp54-201ENSMUST00000022356 Rad21Q61550 635 aaKnown RBP10.31□□□□□ -0.76
Usp54-201ENSMUST00000022356 Kcnn1Q9EQR3 537 aa10.31□□□□□ -0.76
Usp54-201ENSMUST00000022356 Map7O88735 730 aa10.3□□□□□ -0.76
Usp54-201ENSMUST00000022356 Rangap1P46061 589 aaKnown RBP10.3□□□□□ -0.76
Usp54-201ENSMUST00000022356 Smc4Q8CG47 1286 aa10.3□□□□□ -0.76
Usp54-201ENSMUST00000022356 Cux1P53564 1515 aa10.3□□□□□ -0.76
Usp54-201ENSMUST00000022356 CatipB9EKE5 520 aa10.29□□□□□ -0.76
Usp54-201ENSMUST00000022356 Rock2P70336 1388 aa10.29□□□□□ -0.76
Usp54-201ENSMUST00000022356 Gsdma3Q5Y4Y6 464 aa10.28□□□□□ -0.76
Usp54-201ENSMUST00000022356 Ifit1bl1D3Z6F0 470 aa10.28□□□□□ -0.76
Usp54-201ENSMUST00000022356 Plekhd1B2RPU2 505 aa10.28□□□□□ -0.76
Usp54-201ENSMUST00000022356 Q3TQI7 289 aaKnown RBP10.27□□□□□ -0.76
Usp54-201ENSMUST00000022356 MccE9PWI3 1003 aa10.27□□□□□ -0.77
Usp54-201ENSMUST00000022356 Synj1Q8CHC4 1574 aa10.27□□□□□ -0.77
Usp54-201ENSMUST00000022356 ErbinQ80TH2 1402 aa10.27□□□□□ -0.77
Usp54-201ENSMUST00000022356 Mrs2Q5NCE8 434 aa10.27□□□□□ -0.77
Usp54-201ENSMUST00000022356 Zpr1Q62384 459 aa10.27□□□□□ -0.77
Usp54-201ENSMUST00000022356 Ythdc1E9Q5K9 736 aaKnown RBP10.26□□□□□ -0.77
Usp54-201ENSMUST00000022356 ScribQ80U72 1612 aa10.26□□□□□ -0.77
Usp54-201ENSMUST00000022356 Chmp7Q8R1T1 451 aa10.26□□□□□ -0.77
Usp54-201ENSMUST00000022356 Gnl3lQ6PGG6 577 aaKnown RBP10.25□□□□□ -0.77
Usp54-201ENSMUST00000022356 Anp32aO35381 247 aa10.25□□□□□ -0.77
Usp54-201ENSMUST00000022356 Trim26Q99PN3 545 aa10.25□□□□□ -0.77
Usp54-201ENSMUST00000022356 Gimap6Q8K349 305 aa10.24□□□□□ -0.77
Usp54-201ENSMUST00000022356 Pkd2O35245 966 aa10.24□□□□□ -0.77
Usp54-201ENSMUST00000022356 Supt5hO55201 1082 aaKnown RBP10.24□□□□□ -0.77
Usp54-201ENSMUST00000022356 Mbd3Q9Z2D8 285 aaKnown RBP10.23□□□□□ -0.77
Usp54-201ENSMUST00000022356 FanciQ8K368 1330 aa10.23□□□□□ -0.77
Usp54-201ENSMUST00000022356 Sh3bp5Q9Z131 463 aa10.23□□□□□ -0.77
Usp54-201ENSMUST00000022356 Shq1Q7TMX5 569 aa10.22□□□□□ -0.77
Usp54-201ENSMUST00000022356 Myt1Q8CFC2 1127 aa10.22□□□□□ -0.77
Usp54-201ENSMUST00000022356 Cnga1P29974 684 aa10.22□□□□□ -0.77
Usp54-201ENSMUST00000022356 Trak1Q6PD31 939 aa10.22□□□□□ -0.77
Usp54-201ENSMUST00000022356 Ccdc141E9Q8Q6 1531 aa10.22□□□□□ -0.77
Usp54-201ENSMUST00000022356 Arhgap5P97393 1501 aa10.22□□□□□ -0.77
Usp54-201ENSMUST00000022356 Slc5a4bQ91ZP4 660 aa10.22□□□□□ -0.77
Usp54-201ENSMUST00000022356 Birc3O08863 600 aa10.21□□□□□ -0.77
Usp54-201ENSMUST00000022356 Srcin1Q9QWI6 1250 aa10.21□□□□□ -0.77
Usp54-201ENSMUST00000022356 Cabp1Q9JLK7 227 aa10.21□□□□□ -0.78
Usp54-201ENSMUST00000022356 Cabp4Q8VHC5 271 aa10.2□□□□□ -0.78
Usp54-201ENSMUST00000022356 1700019A02RikA0A087WPV9 146 aa10.2□□□□□ -0.78
Usp54-201ENSMUST00000022356 UvssaQ9D479 717 aa10.2□□□□□ -0.78
Usp54-201ENSMUST00000022356 Rock1P70335 1354 aa10.2□□□□□ -0.78
Usp54-201ENSMUST00000022356 KnstrnQ9D9Z1 312 aaKnown RBP10.2□□□□□ -0.78
Usp54-201ENSMUST00000022356 Zmym3Q9JLM4 1370 aa10.2□□□□□ -0.78
Usp54-201ENSMUST00000022356 Stk31Q99MW1 1018 aa10.19□□□□□ -0.78
Usp54-201ENSMUST00000022356 Dmrt2Q8BG36 561 aa10.19□□□□□ -0.78
Usp54-201ENSMUST00000022356 Ccdc47Q9D024 483 aaKnown RBP10.19□□□□□ -0.78
Usp54-201ENSMUST00000022356 PtprkP35822 1457 aa10.19□□□□□ -0.78
Usp54-201ENSMUST00000022356 Clstn1Q9EPL2 979 aa10.19□□□□□ -0.78
Usp54-201ENSMUST00000022356 Chrna2Q91X60 512 aa10.18□□□□□ -0.78
Usp54-201ENSMUST00000022356 Wdhd1P59328 1117 aa10.18□□□□□ -0.78
Usp54-201ENSMUST00000022356 PnisrA2AJT4 805 aaKnown RBP10.17□□□□□ -0.78
Usp54-201ENSMUST00000022356 Ttc5Q99LG4 440 aa10.17□□□□□ -0.78
Usp54-201ENSMUST00000022356 Duox2A2AQ99 1517 aa10.17□□□□□ -0.78
Usp54-201ENSMUST00000022356 Mphosph9A6H5Y1 991 aa10.17□□□□□ -0.78
Usp54-201ENSMUST00000022356 Hsp90b1P08113 802 aaKnown RBP10.16□□□□□ -0.78
Usp54-201ENSMUST00000022356 PogzQ8BZH4 1409 aaKnown RBP10.16□□□□□ -0.78
Usp54-201ENSMUST00000022356 Rundc1Q0VDN7 615 aa10.16□□□□□ -0.78
Usp54-201ENSMUST00000022356 Anks4bQ8K3X6 423 aa10.15□□□□□ -0.78
Usp54-201ENSMUST00000022356 Ppargc1bQ8VHJ7 1014 aa10.15□□□□□ -0.78
Usp54-201ENSMUST00000022356 PtmsQ9D0J8 101 aaKnown RBP10.15□□□□□ -0.78
Usp54-201ENSMUST00000022356 Emilin2Q8K482 1074 aa10.15□□□□□ -0.78
Usp54-201ENSMUST00000022356 Ubap1lG3UW59 384 aa10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 Tnnt1O88346 262 aa10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 Chmp3Q9CQ10 224 aa10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 NrkQ9R0G8 1455 aa10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 Top2aQ01320 1528 aaKnown RBP10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 Crocc2F6XLV1 1638 aa10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 Fmnl2A2APV2 1086 aa10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 U2af1Q9D883 239 aaKnown RBP10.14□□□□□ -0.79
Usp54-201ENSMUST00000022356 Gm21190A0A0G2JGJ6 266 aa10.13□□□□□ -0.79
Usp54-201ENSMUST00000022356 U2surpQ6NV83 1029 aaKnown RBP10.13□□□□□ -0.79
Usp54-201ENSMUST00000022356 Cc2d2aQ8CFW7 1633 aa10.13□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms