RNA–Protein interactions for RNA: ENSMUST00000004428.13

Clcn5-201, Transcript of H(+)/Cl(-) exchange transporter 5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clcn5, Length 8,390 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn5-201ENSMUST00000004428 Ush1cQ9ES64 910 aa8.21□□□□□ -1.09
Clcn5-201ENSMUST00000004428 Hsp90ab1P11499 724 aaKnown RBP8.21□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Mapk8ip2Q9ERE9 830 aa8.21□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Eif3dO70194 548 aaKnown RBP8.21□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Cecr2E9Q2Z1 1453 aa8.2□□□□□ -1.1
Clcn5-201ENSMUST00000004428 VgfQ0VGU4 617 aa8.2□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Trim26Q99PN3 545 aa8.2□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Polr1aO35134 1717 aaKnown RBP8.2□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Cux2P70298 1426 aa8.19□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Kif3aP28741 701 aa8.19□□□□□ -1.1
Clcn5-201ENSMUST00000004428 IbspQ61711 324 aa8.19□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Mia2Q91ZV0 1396 aa8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Fez1Q8K0X8 392 aa8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Ftsj3Q9DBE9 838 aaKnown RBP8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Gtf3c5Q8R2T8 520 aa8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 CanxP35564 591 aaKnown RBP8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Kiaa1211Q5PR69 1207 aa8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 DekQ7TNV0 380 aaKnown RBP8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Stk11ipQ3TAA7 1072 aa8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Erich4Q3UNU4 136 aa8.18□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Ipo7Q9EPL8 1038 aaKnown RBP8.17□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Plagl1Q9JLQ4 704 aa8.17□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Gps2Q921N8 327 aa8.17□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Tpm1P58771 284 aa8.17□□□□□ -1.1
Clcn5-201ENSMUST00000004428 U2surpQ6NV83 1029 aaKnown RBP8.16□□□□□ -1.1
Clcn5-201ENSMUST00000004428 LrpprcQ6PB66 1392 aaKnown RBP8.16□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Ripply1Q2WG77 201 aa8.15□□□□□ -1.1
Clcn5-201ENSMUST00000004428 BicraF8VPZ9 1578 aa8.15□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Ccdc173A0JLY1 547 aa8.15□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Dhx57Q6P5D3 1388 aaKnown RBP8.15□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Fgd1P52734 960 aa8.15□□□□□ -1.1
Clcn5-201ENSMUST00000004428 Efcab5A0JP43 1406 aa8.15□□□□□ -1.11
Clcn5-201ENSMUST00000004428 BlmO88700 1416 aa8.15□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Carmil1Q6EDY6 1374 aa8.14□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Tmx4Q8C0L0 335 aa8.14□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Anp32eP97822 260 aaKnown RBP8.14□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Taf3Q5HZG4 932 aa8.14□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Cep162Q6ZQ06 1403 aa8.14□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Tcerg1Q8CGF7 1100 aaKnown RBP8.14□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Znhit6Q3UFB2 460 aaKnown RBP8.13□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Mns1Q61884 491 aa8.13□□□□□ -1.11
Clcn5-201ENSMUST00000004428 EzrP26040 586 aaKnown RBP8.13□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Rsph4aQ8BYM7 716 aa8.13□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Gprasp1Q5U4C1 1347 aa8.12□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Tpm2P58774 284 aa8.12□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Hook1Q8BIL5 728 aa8.12□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Cgnl1Q6AW69 1298 aa8.12□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Tpm4Q6IRU2 248 aa8.12□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Pdcl3Q8BVF2 240 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Rock2P70336 1388 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Rbm25B2RY56 838 aaKnown RBP8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 TxlnbQ8VBT1 685 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Hmgn5Q9JL35 406 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Fyco1Q8VDC1 1437 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 CntlnA2AM05 1397 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Ccer1Q9CQL2 403 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Rtf1A2AQ19 715 aaKnown RBP8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Aebp1Q640N1 1128 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 NgefQ8CHT1 710 aa8.11□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Arglu1Q3UL36 271 aaKnown RBP8.1□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Def6Q8C2K1 630 aa8.1□□□□□ -1.11
Clcn5-201ENSMUST00000004428 NrkQ9R0G8 1455 aa8.1□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Rrp9Q91WM3 475 aaKnown RBP8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Map3k1P53349 1493 aa8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Rabep1O35551 862 aa8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 NaspQ99MD9 773 aaKnown RBP8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Srek1Q8BZX4 494 aaKnown RBP8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Paip2Q9D6V8 124 aa8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Sart3Q9JLI8 962 aaKnown RBP8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Plekhg3Q4VAC9 1341 aa8.09□□□□□ -1.11
Clcn5-201ENSMUST00000004428 Evc2Q8K1G2 1220 aa8.08□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Wdr62Q3U3T8 1523 aa8.08□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Stard8Q8K031 1019 aa8.08□□□□□ -1.12
Clcn5-201ENSMUST00000004428 TimelessQ9R1X4 1197 aa8.08□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Kif7B7ZNG0 1348 aa8.08□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Ralbp1Q62172 648 aa8.08□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Fez2Q6TYB5 348 aa8.07□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Ccdc47Q9D024 483 aaKnown RBP8.07□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Trim30aP15533 496 aa8.07□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Lmod2Q3UHZ5 550 aa8.07□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Ccdc88bQ4QRL3 1481 aa8.07□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Rnf20Q5DTM8 973 aa8.07□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Smc2Q8CG48 1191 aaKnown RBP8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Mrc2Q64449 1479 aa8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Arid3aQ62431 601 aa8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Hmgb2P30681 210 aaKnown RBP8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Ddx46Q569Z5 1032 aaKnown RBP8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Tubb4bP68372 445 aaKnown RBP8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Ciz1Q8VEH2 845 aa8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Trim30dE9PWL0 497 aa8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Arid4aF8VPQ2 1261 aaKnown RBP8.06□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Itgb1bp2Q9R000 350 aa8.05□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Dhx29Q6PGC1 1365 aaKnown RBP8.05□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Top2aQ01320 1528 aaKnown RBP8.05□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Top2bQ64511 1612 aa8.05□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Zbtb4Q5F293 982 aa8.05□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Fam107bQ3TGF2 131 aa8.05□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Atp1b4Q99ME6 356 aa8.05□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Rapgef2Q8CHG7 1496 aa8.04□□□□□ -1.12
Clcn5-201ENSMUST00000004428 Rsph3aQ3UFY4 516 aa8.04□□□□□ -1.12
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms