RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	SNF3	P10870	884 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	CLC1	P17891	233 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	BUD14	P27637	709 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	GAC1	P28006	793 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	HCS1	P34243	683 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	UBA4	P38820	440 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	APE4	P38821	490 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	MET30	P39014	640 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	PCL6	P40038	420 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	YIL060W	P40519	144 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	HXT9	P40885	567 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	CAF130	P53280	1122 aa	Predicted RBP	1.73	□□□□□ -2.13
RLM1	YPL089C	OGG1	P53397	376 aa	Predicted RBP	1.73	□□□□□ -2.13
RLM1	YPL089C	OAZ1	Q02803	292 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	SOV1	Q04748	898 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	POS5	Q06892	414 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	YDL057W	Q07379	328 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	FMP45	Q07651	309 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	YLR112W	Q12130	139 aa		1.73	□□□□□ -2.13
RLM1	YPL089C	NCE102	Q12207	173 aa	RIP-Chip data	1.73	□□□□□ -2.13	not detected
RLM1	YPL089C	YML133C	Q03099	1374 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	YLL067C	Q07888	1374 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	YLL066C	Q99208	1374 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	RPL42A	P0CX27	106 aa	Known RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	RPL42B	P0CX28	106 aa	Known RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	NAT1	P12945	854 aa	Known RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	PRP2	P20095	876 aa	Predicted RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	CPR2	P23285	205 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	PPH22	P23595	377 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	SNT1	P25357	1226 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	RML2	P32611	393 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	MDL1	P33310	695 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	ROT2	P38138	954 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	LEU5	P38702	357 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	GDI1	P39958	451 aa	Known RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	YAT2	P40017	923 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	VMA13	P41807	478 aa	Known RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	1.72	□□□□□ -2.13	not detected
RLM1	YPL089C	VPS25	P47142	202 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	TCB2	P48231	1178 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	PYK2	P52489	506 aa	Known RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	MNP1	P53163	194 aa	Predicted RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	YGR126W	P53274	230 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	KAP120	Q02932	1032 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	GYL1	Q04322	720 aa		1.72	□□□□□ -2.13
RLM1	YPL089C	PAR32	Q12515	295 aa	Known RBP	1.72	□□□□□ -2.13
RLM1	YPL089C	CBP1	P07252	654 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	PEP4	P07267	405 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	1.71	□□□□□ -2.14	not detected
RLM1	YPL089C	RPB8	P20436	146 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	IDH2	P28241	369 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	DPH2	P32461	534 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	VPH1	P32563	840 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	TFB1	P32776	642 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	YME2	P32843	850 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	TUL1	P36096	758 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	MBB1	P39534	108 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	YIL169C	P40442	995 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	LCB2	P40970	561 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	CAK1	P43568	368 aa	Predicted RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	ATG27	P46989	271 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	AIM22	P47051	409 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	YMR160W	Q03823	816 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	ARP10	Q04549	284 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	DON1	Q05610	365 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	ECI1	Q05871	280 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	GPM3	Q12326	303 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	PDH1	Q12428	516 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	COR1	P07256	457 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	SPB1	P25582	841 aa	Predicted RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	RAD14	P28519	371 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	SHP1	P34223	423 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	TCM62	P38228	572 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	RXT2	P38255	430 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	ALK1	P43633	760 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	SNG1	P46950	547 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	YGR149W	P48236	432 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	PKP2	P53170	491 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	DUG3	P53871	357 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	HEF3	P53978	1044 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	YVH1	Q02256	364 aa	Known RBP	1.71	□□□□□ -2.14
RLM1	YPL089C	IZH1	Q03419	316 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	YLR281C	Q05863	155 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	GRS2	Q06817	618 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	SIL1	Q08199	421 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	THP1	Q08231	455 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	CTF3	Q12748	733 aa		1.71	□□□□□ -2.14
RLM1	YPL089C	PEP5	P12868	1029 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	SUI2	P20459	304 aa	Known RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	RRP7	P25368	297 aa	Predicted RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	YIM1	P28625	365 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	AFG1	P32317	509 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	YKL023W	P36103	277 aa	Known RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	STV1	P37296	890 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	YHR210C	P38893	341 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	CCT4	P39078	528 aa	Known RBP	1.7	□□□□□ -2.14
RLM1	YPL089C	YND1	P40009	630 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	COS5	P47187	383 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	YGL108C	P53139	140 aa		1.7	□□□□□ -2.14
RLM1	YPL089C	DRN1	P53255	507 aa	Known RBP	1.7	□□□□□ -2.14

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms