RNA–Protein interactions for RNA: YOR087W

YVC1, Transcript of Vacuolar cation channel, yeastyeast

Gene YVC1, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YVC1YOR087W PXL1P36166 706 aa3.88□□□□□ -1.79
YVC1YOR087W ARN1P38731 627 aa3.88□□□□□ -1.79
YVC1YOR087W SER3P40054 469 aa3.88□□□□□ -1.79
YVC1YOR087W RPS10BP46784 105 aaKnown RBP3.88□□□□□ -1.79
YVC1YOR087W COS5P47187 383 aa3.88□□□□□ -1.79
YVC1YOR087W YGR149WP48236 432 aa3.88□□□□□ -1.79
YVC1YOR087W YGR126WP53274 230 aa3.88□□□□□ -1.79
YVC1YOR087W YNR068CP53754 272 aa3.88□□□□□ -1.79
YVC1YOR087W PIG1Q06216 648 aa3.88□□□□□ -1.79
YVC1YOR087W COS7Q07788 383 aa3.88□□□□□ -1.79
YVC1YOR087W IRC10Q08118 586 aa3.88□□□□□ -1.79
YVC1YOR087W DCI1Q08558 271 aa3.88□□□□□ -1.79
YVC1YOR087W YER145C-AA0A023PYF4 145 aa3.88□□□□□ -1.79
YVC1YOR087W HIP1P06775 603 aa3.88□□□□□ -1.79
YVC1YOR087W SPB1P25582 841 aaPredicted RBP3.88□□□□□ -1.79
YVC1YOR087W SMI1P32566 505 aa3.88□□□□□ -1.79
YVC1YOR087W MTR2P34232 184 aaKnown RBP3.88□□□□□ -1.79
YVC1YOR087W YSW1P38280 609 aa3.88□□□□□ -1.79
YVC1YOR087W RIX1P38883 763 aaPredicted RBP3.88□□□□□ -1.79
YVC1YOR087W ATG27P46989 271 aa3.88□□□□□ -1.79
YVC1YOR087W AIM22P47051 409 aa3.88□□□□□ -1.79
YVC1YOR087W HEL2Q05580 639 aaKnown RBP3.88□□□□□ -1.79
YVC1YOR087W ATG26Q06321 1198 aa3.88□□□□□ -1.79
YVC1YOR087W CFT2Q12102 859 aaPredicted RBP3.88□□□□□ -1.79
YVC1YOR087W STF1P01098 86 aa3.87□□□□□ -1.79
YVC1YOR087W CBP1P07252 654 aa3.87□□□□□ -1.79
YVC1YOR087W NUP1P20676 1076 aa3.87□□□□□ -1.79
YVC1YOR087W GYP6P32806 458 aa3.87□□□□□ -1.79
YVC1YOR087W SLI1P53304 468 aa3.87□□□□□ -1.79
YVC1YOR087W ASI1P54074 624 aa3.87□□□□□ -1.79
YVC1YOR087W FMP30Q02883 468 aa3.87□□□□□ -1.79
YVC1YOR087W SNU56Q03782 492 aaKnown RBP3.87□□□□□ -1.79
YVC1YOR087W ADE13Q05911 482 aaKnown RBP3.87□□□□□ -1.79
YVC1YOR087W SIL1Q08199 421 aa3.87□□□□□ -1.79
YVC1YOR087W VPS54Q12071 889 aa3.87□□□□□ -1.79
YVC1YOR087W MED2Q12124 431 aa3.87□□□□□ -1.79
YVC1YOR087W SUT2Q12286 268 aa3.87□□□□□ -1.79
YVC1YOR087W SRV2P17555 526 aaKnown RBP3.87□□□□□ -1.79
YVC1YOR087W YIM1P28625 365 aa3.87□□□□□ -1.79
YVC1YOR087W ARA1P38115 344 aa3.87□□□□□ -1.79
YVC1YOR087W ARP1P38696 384 aa3.87□□□□□ -1.79
YVC1YOR087W ULP2P40537 1034 aaPredicted RBP3.87□□□□□ -1.79
YVC1YOR087W PYK2P52489 506 aaKnown RBP3.87□□□□□ -1.79
YVC1YOR087W YGL108CP53139 140 aa3.87□□□□□ -1.79
YVC1YOR087W ACL4Q03771 387 aa3.87□□□□□ -1.79
YVC1YOR087W SWF1Q04629 336 aa3.87□□□□□ -1.79
YVC1YOR087W YLR456WQ06199 204 aa3.87□□□□□ -1.79
YVC1YOR087W TPO3Q06451 622 aa3.87□□□□□ -1.79
YVC1YOR087W RAV1P47104 1357 aa3.87□□□□□ -1.79
YVC1YOR087W RHO2P06781 192 aa3.86□□□□□ -1.79
YVC1YOR087W COR1P07256 457 aa3.86□□□□□ -1.79
YVC1YOR087W PEP4P07267 405 aaKnown RBP3.86□□□□□ -1.79
YVC1YOR087W YML002WP0CF17 737 aa3.86□□□□□ -1.79
YVC1YOR087W AFG1P32317 509 aa3.86□□□□□ -1.79
YVC1YOR087W SHP1P34223 423 aa3.86□□□□□ -1.79
YVC1YOR087W UBA4P38820 440 aa3.86□□□□□ -1.79
YVC1YOR087W UBP8P50102 471 aa3.86□□□□□ -1.79
YVC1YOR087W NRD1P53617 575 aaKnown RBP RIP-Chip data3.86□□□□□ -1.79not detected
YVC1YOR087W EAF7P53911 425 aaKnown RBP3.86□□□□□ -1.79
YVC1YOR087W SLG1P54867 378 aa3.86□□□□□ -1.79
YVC1YOR087W BRR1Q99177 341 aaPredicted RBP3.86□□□□□ -1.79
YVC1YOR087W GPH1P06738 902 aaKnown RBP3.85□□□□□ -1.79
YVC1YOR087W LPD1P09624 499 aaKnown RBP3.85□□□□□ -1.79
YVC1YOR087W URA4P20051 364 aa3.85□□□□□ -1.79
YVC1YOR087W MSP1P28737 362 aa3.85□□□□□ -1.79
YVC1YOR087W YKL023WP36103 277 aaKnown RBP3.85□□□□□ -1.79
YVC1YOR087W DAD2P36162 133 aa3.85□□□□□ -1.79
YVC1YOR087W YHR210CP38893 341 aa3.85□□□□□ -1.79
YVC1YOR087W MBB1P39534 108 aa3.85□□□□□ -1.79
YVC1YOR087W RPT4P53549 437 aaKnown RBP3.85□□□□□ -1.79
YVC1YOR087W KTR5P53966 522 aaPredicted RBP3.85□□□□□ -1.79
YVC1YOR087W HEF3P53978 1044 aaKnown RBP3.85□□□□□ -1.79
YVC1YOR087W YMR130WQ04223 302 aa3.85□□□□□ -1.79
YVC1YOR087W DBP9Q06218 594 aaKnown RBP3.85□□□□□ -1.79
YVC1YOR087W YDL057WQ07379 328 aa3.85□□□□□ -1.79
YVC1YOR087W THP1Q08231 455 aa3.85□□□□□ -1.79
YVC1YOR087W APL5Q08951 932 aaKnown RBP3.85□□□□□ -1.79
YVC1YOR087W NCE102Q12207 173 aaRIP-Chip data3.85□□□□□ -1.79not detected
YVC1YOR087W YLR111WQ12528 110 aa3.85□□□□□ -1.79
YVC1YOR087W CLN1P20437 546 aa3.85□□□□□ -1.79
YVC1YOR087W PPQ1P32945 549 aa3.85□□□□□ -1.79
YVC1YOR087W PCH2P38126 564 aa3.85□□□□□ -1.79
YVC1YOR087W PCL7P40186 285 aa3.85□□□□□ -1.79
YVC1YOR087W ATF1P40353 525 aa3.85□□□□□ -1.79
YVC1YOR087W SNG1P46950 547 aa3.85□□□□□ -1.79
YVC1YOR087W ECM27P47144 725 aa3.85□□□□□ -1.79
YVC1YOR087W BPL1P48445 690 aaPredicted RBP3.85□□□□□ -1.79
YVC1YOR087W SHE4P51534 789 aa3.85□□□□□ -1.79
YVC1YOR087W ALT2P52892 507 aa3.85□□□□□ -1.79
YVC1YOR087W DUG3P53871 357 aa3.85□□□□□ -1.79
YVC1YOR087W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
YVC1YOR087W PNS1Q12412 539 aa3.85□□□□□ -1.79
YVC1YOR087W SNF3P10870 884 aa3.84□□□□□ -1.79
YVC1YOR087W SPO7P18410 259 aa3.84□□□□□ -1.79
YVC1YOR087W SPC110P32380 944 aa3.84□□□□□ -1.79
YVC1YOR087W YEL043WP32618 956 aa3.84□□□□□ -1.79
YVC1YOR087W GDT1P38301 280 aaPredicted RBP3.84□□□□□ -1.79
YVC1YOR087W YJL132WP47014 750 aa3.84□□□□□ -1.79
YVC1YOR087W RMD9P53140 646 aaKnown RBP3.84□□□□□ -1.79
YVC1YOR087W AEP3Q12089 606 aa3.84□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms