RNA–Protein interactions for RNA: YNL093W

YPT53, Transcript of Stress-induced Rab family GTPase, yeastyeast

Gene YPT53, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT53YNL093W YEL057CP39983 233 aa3.98□□□□□ -1.77
YPT53YNL093W DOT5P40553 215 aa3.98□□□□□ -1.77
YPT53YNL093W YIL001WP40560 513 aa3.98□□□□□ -1.77
YPT53YNL093W ELP2P42935 788 aa3.98□□□□□ -1.77
YPT53YNL093W YHC3P47040 408 aa3.98□□□□□ -1.77
YPT53YNL093W PUS4P48567 403 aaKnown RBP3.98□□□□□ -1.77
YPT53YNL093W YGL114WP53134 725 aa3.98□□□□□ -1.77
YPT53YNL093W SLI1P53304 468 aa3.98□□□□□ -1.77
YPT53YNL093W DUS1P53759 423 aaKnown RBP3.98□□□□□ -1.77
YPT53YNL093W CUS2P53830 285 aaPredicted RBP3.98□□□□□ -1.77
YPT53YNL093W RMI1Q02685 241 aa3.98□□□□□ -1.77
YPT53YNL093W MRP51Q02950 344 aa3.98□□□□□ -1.77
YPT53YNL093W NGL3Q03210 505 aa3.98□□□□□ -1.77
YPT53YNL093W ARX1Q03862 593 aaKnown RBP3.98□□□□□ -1.77
YPT53YNL093W EMI2Q04409 500 aaKnown RBP3.98□□□□□ -1.77
YPT53YNL093W YMR226CQ05016 267 aaKnown RBP3.98□□□□□ -1.77
YPT53YNL093W YPR147CQ06522 304 aaKnown RBP3.98□□□□□ -1.77
YPT53YNL093W IWR1Q07532 353 aaPredicted RBP3.98□□□□□ -1.77
YPT53YNL093W RCL1Q08096 367 aaPredicted RBP3.98□□□□□ -1.77
YPT53YNL093W MET7Q08645 548 aa3.98□□□□□ -1.77
YPT53YNL093W LEA1Q08963 238 aaPredicted RBP3.98□□□□□ -1.77
YPT53YNL093W BTS1Q12051 335 aa3.98□□□□□ -1.77
YPT53YNL093W YPL066WQ12194 479 aa3.98□□□□□ -1.77
YPT53YNL093W TIP41Q12199 356 aa3.98□□□□□ -1.77
YPT53YNL093W NTO1Q12311 748 aa3.98□□□□□ -1.77
YPT53YNL093W PNS1Q12412 539 aa3.98□□□□□ -1.77
YPT53YNL093W ISN1Q99312 450 aa3.98□□□□□ -1.77
YPT53YNL093W SPA2P23201 1466 aaKnown RBP3.98□□□□□ -1.77
YPT53YNL093W ARG4P04076 463 aaPredicted RBP3.97□□□□□ -1.77
YPT53YNL093W RPL24AP04449 155 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W NHP6BP11633 99 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W FBA1P14540 359 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W SNF6P18888 332 aa3.97□□□□□ -1.77
YPT53YNL093W PET18P25362 215 aa3.97□□□□□ -1.77
YPT53YNL093W IDH2P28241 369 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W RRP1P35178 278 aaPredicted RBP3.97□□□□□ -1.77
YPT53YNL093W AST1P35183 429 aa3.97□□□□□ -1.77
YPT53YNL093W RFT1P38206 574 aaPredicted RBP3.97□□□□□ -1.77
YPT53YNL093W POA1P38218 177 aa3.97□□□□□ -1.77
YPT53YNL093W VID24P38263 362 aa3.97□□□□□ -1.77
YPT53YNL093W FMO1P38866 432 aa3.97□□□□□ -1.77
YPT53YNL093W HRB1P38922 454 aaKnown RBP RIP-Chip data3.97□□□□□ -1.77not detected
YPT53YNL093W SAK1P38990 1142 aa3.97□□□□□ -1.77
YPT53YNL093W FHL1P39521 936 aa3.97□□□□□ -1.77
YPT53YNL093W RCY1P39531 840 aa3.97□□□□□ -1.77
YPT53YNL093W FMS1P50264 508 aa3.97□□□□□ -1.77
YPT53YNL093W UBC9P50623 157 aaPredicted RBP3.97□□□□□ -1.77
YPT53YNL093W SPT20P50875 604 aa3.97□□□□□ -1.77
YPT53YNL093W YGL185CP53100 379 aa3.97□□□□□ -1.77
YPT53YNL093W YGL159WP53110 370 aa3.97□□□□□ -1.77
YPT53YNL093W DAM1P53267 343 aa3.97□□□□□ -1.77
YPT53YNL093W ZPR1P53303 486 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W NOG1Q02892 647 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W RSM24Q03976 319 aa3.97□□□□□ -1.77
YPT53YNL093W CTS2Q06350 511 aa3.97□□□□□ -1.77
YPT53YNL093W THI22Q06490 572 aa3.97□□□□□ -1.77
YPT53YNL093W SYO1Q07395 620 aa3.97□□□□□ -1.77
YPT53YNL093W ENT4Q07872 247 aa3.97□□□□□ -1.77
YPT53YNL093W SMC5Q08204 1093 aa3.97□□□□□ -1.77
YPT53YNL093W BSC6Q08280 497 aa3.97□□□□□ -1.77
YPT53YNL093W NRT1Q08485 598 aa3.97□□□□□ -1.77
YPT53YNL093W SGO1Q08490 590 aa3.97□□□□□ -1.77
YPT53YNL093W GPN2Q08726 347 aaPredicted RBP3.97□□□□□ -1.77
YPT53YNL093W BUD7Q08754 746 aa3.97□□□□□ -1.77
YPT53YNL093W LYS21Q12122 440 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W YRA1Q12159 226 aaKnown RBP3.97□□□□□ -1.77
YPT53YNL093W INP53Q12271 1107 aa3.97□□□□□ -1.77
YPT53YNL093W CBP1P07252 654 aa3.96□□□□□ -1.78
YPT53YNL093W RPL35AP0CX84 120 aaKnown RBP3.96□□□□□ -1.78
YPT53YNL093W RPL35BP0CX85 120 aaKnown RBP3.96□□□□□ -1.78
YPT53YNL093W SWI4P25302 1093 aaKnown RBP3.96□□□□□ -1.78
YPT53YNL093W RHB1P25378 209 aa3.96□□□□□ -1.78
YPT53YNL093W YCL068CP25593 260 aa3.96□□□□□ -1.78
YPT53YNL093W PPA2P28239 310 aa3.96□□□□□ -1.78
YPT53YNL093W MF(ALPHA)2P32435 120 aa3.96□□□□□ -1.78
YPT53YNL093W RPD3P32561 433 aa3.96□□□□□ -1.78
YPT53YNL093W SPR1P32603 445 aa3.96□□□□□ -1.78
YPT53YNL093W YOX1P34161 385 aa3.96□□□□□ -1.78
YPT53YNL093W DBP7P36120 742 aaKnown RBP3.96□□□□□ -1.78
YPT53YNL093W PPS1P38148 807 aa3.96□□□□□ -1.78
YPT53YNL093W FIG1P38224 298 aa3.96□□□□□ -1.78
YPT53YNL093W AME1P38313 324 aa3.96□□□□□ -1.78
YPT53YNL093W RRT2P38332 387 aa3.96□□□□□ -1.78
YPT53YNL093W END3P39013 349 aa3.96□□□□□ -1.78
YPT53YNL093W MPT5P39016 859 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
YPT53YNL093W FRT2P39734 528 aa3.96□□□□□ -1.78
YPT53YNL093W GUS1P46655 708 aaKnown RBP RIP-Chip data3.96□□□□□ -1.78not detected
YPT53YNL093W HIT1P46973 164 aa3.96□□□□□ -1.78
YPT53YNL093W RPA34P47006 233 aaPredicted RBP3.96□□□□□ -1.78
YPT53YNL093W RTT101P47050 842 aa3.96□□□□□ -1.78
YPT53YNL093W EFM3P47163 339 aa3.96□□□□□ -1.78
YPT53YNL093W STB4P50104 949 aa3.96□□□□□ -1.78
YPT53YNL093W YGL204CP53089 101 aa3.96□□□□□ -1.78
YPT53YNL093W YGR283CP53336 341 aaPredicted RBP3.96□□□□□ -1.78
YPT53YNL093W MRPL50P53724 139 aa3.96□□□□□ -1.78
YPT53YNL093W ATP25Q03153 612 aa3.96□□□□□ -1.78
YPT53YNL093W ENT5Q03769 411 aaKnown RBP3.96□□□□□ -1.78
YPT53YNL093W RPN9Q04062 393 aaKnown RBP3.96□□□□□ -1.78
YPT53YNL093W YDR514CQ04408 483 aa3.96□□□□□ -1.78
YPT53YNL093W HRQ1Q05549 1077 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms