RNA–Protein interactions for RNA: YLR220W

CCC1, Transcript of Vacuolar Fe2+/Mn2+ transporter, yeast

Gene CCC1, Length 969 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CCC1	YLR220W	HXT7	P39004	570 aa		15.06	■□□□□ 0
CCC1	YLR220W	MPS1	P54199	764 aa		15.06	■□□□□ 0
CCC1	YLR220W	REX2	P54964	269 aa	Known RBP	15.06	■□□□□ 0
CCC1	YLR220W	YDR444W	Q04093	687 aa		15.06	■□□□□ 0
CCC1	YLR220W	YML096W	Q04489	525 aa		15.06	■□□□□ 0
CCC1	YLR220W	FAR10	Q06001	478 aa		15.06	■□□□□ 0
CCC1	YLR220W	YPL245W	Q12179	454 aa	Known RBP	15.06	■□□□□ 0
CCC1	YLR220W	YPR011C	Q12251	326 aa		15.06	■□□□□ 0
CCC1	YLR220W	RGT2	Q12300	763 aa		15.06	■□□□□ 0
CCC1	YLR220W	STT4	P37297	1900 aa		15.05	■□□□□ 0
CCC1	YLR220W	RAD14	P28519	371 aa		15.05	■□□□□ -0
CCC1	YLR220W	MLS1	P30952	554 aa		15.05	■□□□□ -0
CCC1	YLR220W	EMC3	P36039	253 aa		15.05	■□□□□ -0
CCC1	YLR220W	FTH1	P38310	465 aa		15.05	■□□□□ -0
CCC1	YLR220W	TSC10	P38342	320 aa		15.05	■□□□□ -0
CCC1	YLR220W	FRT2	P39734	528 aa		15.05	■□□□□ -0
CCC1	YLR220W	YPS6	P40583	537 aa		15.05	■□□□□ -0
CCC1	YLR220W	SGF73	P53165	657 aa		15.05	■□□□□ -0
CCC1	YLR220W	SRN2	Q99176	213 aa		15.05	■□□□□ -0
CCC1	YLR220W	RED1	P14291	827 aa		15.04	■□□□□ -0
CCC1	YLR220W	PRP6	P19735	899 aa	Predicted RBP	15.04	■□□□□ -0
CCC1	YLR220W	CAF4	P36130	643 aa		15.04	■□□□□ -0
CCC1	YLR220W	MET12	P46151	657 aa		15.04	■□□□□ -0
CCC1	YLR220W	YGR053C	P53234	283 aa		15.04	■□□□□ -0
CCC1	YLR220W	EGD1	Q02642	157 aa	Known RBP	15.04	■□□□□ -0
CCC1	YLR220W	SPC24	Q04477	213 aa		15.04	■□□□□ -0
CCC1	YLR220W	YDR124W	Q04608	324 aa		15.04	■□□□□ -0
CCC1	YLR220W	CDA1	Q06702	301 aa		15.04	■□□□□ -0
CCC1	YLR220W	UAF30	Q08747	228 aa		15.04	■□□□□ -0
CCC1	YLR220W	GPR1	Q12361	961 aa		15.04	■□□□□ -0
CCC1	YLR220W	CMR1	Q12510	522 aa	Known RBP	15.04	■□□□□ -0
CCC1	YLR220W	PET309	P32522	965 aa	Predicted RBP	15.03	■□□□□ -0
CCC1	YLR220W	PTC1	P35182	281 aa		15.03	■□□□□ -0
CCC1	YLR220W	NTR2	P36118	322 aa	Predicted RBP	15.03	■□□□□ -0
CCC1	YLR220W	HXT16	P47185	567 aa		15.03	■□□□□ -0
CCC1	YLR220W	HXT15	P54854	567 aa		15.03	■□□□□ -0
CCC1	YLR220W	YCL012C	Q8J0M4	134 aa		15.03	■□□□□ -0
CCC1	YLR220W	PHO87	P25360	923 aa		15.02	■□□□□ -0
CCC1	YLR220W	RNQ1	P25367	405 aa		15.02	■□□□□ -0
CCC1	YLR220W	PHO91	P27514	894 aa		15.02	■□□□□ -0
CCC1	YLR220W	STE14	P32584	239 aa		15.02	■□□□□ -0
CCC1	YLR220W	KKQ8	P36004	724 aa		15.02	■□□□□ -0
CCC1	YLR220W	YHR033W	P38690	423 aa		15.02	■□□□□ -0
CCC1	YLR220W	CCT7	P42943	550 aa	Known RBP	15.02	■□□□□ -0
CCC1	YLR220W	TMA22	P47089	198 aa	Predicted RBP	15.02	■□□□□ -0
CCC1	YLR220W	GIP3	Q03016	1276 aa		15.02	■□□□□ -0
CCC1	YLR220W	POL2	P21951	2222 aa	Known RBP	15.02	□□□□□ -0.01
CCC1	YLR220W	PRT1	P06103	763 aa	Known RBP	15.01	□□□□□ -0.01
CCC1	YLR220W	GFD2	P25370	566 aa	Known RBP	15.01	□□□□□ -0.01
CCC1	YLR220W	DEP1	P31385	405 aa		15.01	□□□□□ -0.01
CCC1	YLR220W	CEM1	P39525	442 aa		15.01	□□□□□ -0.01
CCC1	YLR220W	ERV46	P39727	415 aa		15.01	□□□□□ -0.01
CCC1	YLR220W	PTR3	P43606	678 aa		15.01	□□□□□ -0.01
CCC1	YLR220W	IMA1	P53051	589 aa		15.01	□□□□□ -0.01
CCC1	YLR220W	USE1	P53146	245 aa		15.01	□□□□□ -0.01
CCC1	YLR220W	ECM11	Q04110	302 aa		15.01	□□□□□ -0.01
CCC1	YLR220W	RTK1	Q12100	620 aa	Predicted RBP	15.01	□□□□□ -0.01
CCC1	YLR220W	HTA2	P04912	132 aa		15	□□□□□ -0.01
CCC1	YLR220W	RPS4A	P0CX35	261 aa	Known RBP	15	□□□□□ -0.01
CCC1	YLR220W	RPS4B	P0CX36	261 aa	Known RBP	15	□□□□□ -0.01
CCC1	YLR220W	RNA1	P11745	407 aa	Known RBP	15	□□□□□ -0.01
CCC1	YLR220W	LAT1	P12695	482 aa	Known RBP	15	□□□□□ -0.01
CCC1	YLR220W	FUR1	P18562	216 aa	Known RBP	15	□□□□□ -0.01
CCC1	YLR220W	SGV1	P23293	657 aa	Known RBP	15	□□□□□ -0.01
CCC1	YLR220W	MEI5	P32489	222 aa		15	□□□□□ -0.01
CCC1	YLR220W	CDC13	P32797	924 aa	Known RBP	15	□□□□□ -0.01
CCC1	YLR220W	ARA1	P38115	344 aa		15	□□□□□ -0.01
CCC1	YLR220W	YBL029W	P38201	376 aa		15	□□□□□ -0.01
CCC1	YLR220W	PRP38	Q00723	242 aa	Predicted RBP	15	□□□□□ -0.01
CCC1	YLR220W	YMR102C	Q03177	834 aa		15	□□□□□ -0.01
CCC1	YLR220W	YET2	Q04210	160 aa		15	□□□□□ -0.01
CCC1	YLR220W	SAS5	Q99314	248 aa		15	□□□□□ -0.01
CCC1	YLR220W	SPT16	P32558	1035 aa	Known RBP	14.99	□□□□□ -0.01
CCC1	YLR220W	CUE2	P36075	443 aa	Known RBP	14.99	□□□□□ -0.01
CCC1	YLR220W	ARB1	P40024	610 aa	Known RBP	14.99	□□□□□ -0.01
CCC1	YLR220W	LTP1	P40347	161 aa		14.99	□□□□□ -0.01
CCC1	YLR220W	IAH1	P41734	238 aa		14.99	□□□□□ -0.01
CCC1	YLR220W	FET5	P43561	622 aa		14.99	□□□□□ -0.01
CCC1	YLR220W	HAL9	Q12180	1030 aa		14.99	□□□□□ -0.01
CCC1	YLR220W	ARD1	P07347	238 aa	Predicted RBP	14.98	□□□□□ -0.01
CCC1	YLR220W	RPS21A	P0C0V8	87 aa	Known RBP	14.98	□□□□□ -0.01
CCC1	YLR220W	GBP2	P25555	427 aa	Known RBP RIP-Chip data	14.98	□□□□□ -0.01	not detected
CCC1	YLR220W	RGA1	P39083	1007 aa		14.98	□□□□□ -0.01
CCC1	YLR220W	LRO1	P40345	661 aa		14.98	□□□□□ -0.01
CCC1	YLR220W	MIG2	P53035	382 aa		14.98	□□□□□ -0.01
CCC1	YLR220W	OPT2	Q06593	877 aa		14.98	□□□□□ -0.01
CCC1	YLR220W	DIA2	Q08496	732 aa	Predicted RBP	14.98	□□□□□ -0.01
CCC1	YLR220W	YLR111W	Q12528	110 aa		14.98	□□□□□ -0.01
CCC1	YLR220W	DST1	P07273	309 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	SNF5	P18480	905 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	PDB1	P32473	366 aa	Known RBP	14.97	□□□□□ -0.01
CCC1	YLR220W	DOM34	P33309	386 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	YCR087C-A	P37263	153 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	MNT3	P40549	630 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	RLP7	P40693	322 aa	Known RBP	14.97	□□□□□ -0.01
CCC1	YLR220W	MTR3	P48240	250 aa	Predicted RBP	14.97	□□□□□ -0.01
CCC1	YLR220W	KXD1	P53158	218 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	RTS3	P53289	263 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	GTR1	Q00582	310 aa		14.97	□□□□□ -0.01
CCC1	YLR220W	IRC15	Q02733	499 aa		14.97	□□□□□ -0.01

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