RNA–Protein interactions for RNA: YGR280C

PXR1, Transcript of Essential protein involved in rRNA and snoRNA maturation, yeast

Gene PXR1, Length 816 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXR1	YGR280C	URA2	P07259	2214 aa	Known RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	CHA1	P25379	360 aa	Known RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	HXT3	P32466	567 aa	Known RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	MGM101	P32787	269 aa	Known RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	IMP3	P32899	183 aa	Predicted RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	STB6	P36085	766 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	TUL1	P36096	758 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	TRZ1	P36159	838 aa	Predicted RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	ECM2	P38241	364 aa	Known RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	AIM18	P38884	321 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	VPS52	P39904	641 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	GAT2	P40209	560 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	IME4	P41833	600 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	ECO1	P43605	281 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	YGR250C	P53316	781 aa	Known RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	ESBP6	P53918	673 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	SIW14	P53965	281 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	ERG13	P54839	491 aa	Known RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	CDC55	Q00362	526 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	RNH1	Q04740	348 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	YAP7	Q08182	245 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	YDR056C	Q12025	205 aa		4.1	□□□□□ -1.75
PXR1	YGR280C	MRH1	Q12117	320 aa	Predicted RBP	4.1	□□□□□ -1.75
PXR1	YGR280C	BPH1	P25356	2167 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	ARG4	P04076	463 aa	Predicted RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	FUM1	P08417	488 aa	Known RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	STE12	P13574	688 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	TRX1	P22217	103 aa	Known RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	CLB1	P24868	471 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	ERG9	P29704	444 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	CDC12	P32468	407 aa	Known RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	NIP100	P33420	868 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	PRX1	P34227	261 aa	Known RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	YBP1	P38315	674 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	TMN3	P40071	706 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	YNL247W	P53852	767 aa	Known RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	BLS1	Q06071	122 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	RSC3	Q06639	885 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	YOL159C	Q08300	171 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	CUE5	Q08412	411 aa	Known RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	ATG9	Q12142	997 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	PFK27	Q12471	397 aa	Predicted RBP	4.09	□□□□□ -1.75
PXR1	YGR280C	TY4A-H	Q6Q5P6	413 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	YOR032W-A	Q8TGS1	66 aa		4.09	□□□□□ -1.75
PXR1	YGR280C	CAR1	P00812	333 aa	Known RBP	4.08	□□□□□ -1.76
PXR1	YGR280C	GFA1	P14742	717 aa	Known RBP	4.08	□□□□□ -1.76
PXR1	YGR280C	DBF2	P22204	572 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	DCG1	P32460	244 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	DHR2	P36009	735 aa	Predicted RBP	4.08	□□□□□ -1.76
PXR1	YGR280C	LDB7	P38210	180 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	ERP2	P39704	215 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	SPF1	P39986	1215 aa	Known RBP	4.08	□□□□□ -1.76
PXR1	YGR280C	YMR144W	P40214	342 aa	Known RBP	4.08	□□□□□ -1.76
PXR1	YGR280C	OSW7	P43611	510 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	RFX1	P48743	811 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	ATG21	Q02887	496 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	MSA1	Q08471	629 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	YPR071W	Q12346	211 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	YLR149C	Q99296	730 aa		4.08	□□□□□ -1.76
PXR1	YGR280C	MSS116	P15424	664 aa	Known RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	MET8	P15807	274 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	SRV2	P17555	526 aa	Known RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	YKL102C	P34249	101 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	RPC25	P35718	212 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	OMA1	P36163	345 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	MAK5	P38112	773 aa	Predicted RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	YGP1	P38616	354 aa	Known RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	SLZ1	P40167	298 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	ALG8	P40351	577 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	UTP18	P40362	594 aa	Predicted RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	TED1	P40533	473 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	IRC6	P43615	237 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	TOM22	P49334	152 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	SPT20	P50875	604 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	SOK2	P53438	785 aa	Predicted RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	CTR9	P89105	1077 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	NUP100	Q02629	959 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	GAS2	Q06135	555 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	OPY2	Q06810	360 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	TMC1	Q08422	150 aa	Predicted RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	HRK1	Q08732	759 aa	Known RBP	4.07	□□□□□ -1.76
PXR1	YGR280C	SPO24	Q3E752	67 aa		4.07	□□□□□ -1.76
PXR1	YGR280C	EST1	P17214	699 aa	Predicted RBP	4.06	□□□□□ -1.76
PXR1	YGR280C	HIR2	P32480	875 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	REI1	P38344	393 aa	Predicted RBP	4.06	□□□□□ -1.76
PXR1	YGR280C	EFM2	P38347	419 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
PXR1	YGR280C	SAW1	P39735	261 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	SNO3	P43544	222 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	PRY1	P47032	299 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	TIM54	P47045	478 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	RAD17	P48581	401 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	SAM37	P50110	327 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	TEX1	P53851	422 aa	Known RBP	4.06	□□□□□ -1.76
PXR1	YGR280C	ASI1	P54074	624 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	RLI1	Q03195	608 aa	Known RBP	4.06	□□□□□ -1.76
PXR1	YGR280C	YLR001C	Q07895	862 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	YOR012W	Q12351	137 aa		4.06	□□□□□ -1.76
PXR1	YGR280C	CMK1	P27466	446 aa	Known RBP	4.05	□□□□□ -1.76
PXR1	YGR280C	GCD6	P32501	712 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 14.9 ms