RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W YLR352WQ06479 807 aa3.64□□□□□ -1.83
UBC9YDL064W THP1Q08231 455 aa3.64□□□□□ -1.83
UBC9YDL064W SUC2P00724 532 aa3.63□□□□□ -1.83
UBC9YDL064W CDC23P16522 626 aa3.63□□□□□ -1.83
UBC9YDL064W PRP2P20095 876 aaPredicted RBP3.63□□□□□ -1.83
UBC9YDL064W TRS65P32893 560 aa3.63□□□□□ -1.83
UBC9YDL064W MSN2P33748 704 aa3.63□□□□□ -1.83
UBC9YDL064W SMF1P38925 575 aa3.63□□□□□ -1.83
UBC9YDL064W MBB1P39534 108 aa3.63□□□□□ -1.83
UBC9YDL064W YIR014WP40570 242 aa3.63□□□□□ -1.83
UBC9YDL064W STB2P46679 850 aa3.63□□□□□ -1.83
UBC9YDL064W YGR250CP53316 781 aaKnown RBP3.63□□□□□ -1.83
UBC9YDL064W THI20Q08224 551 aa3.63□□□□□ -1.83
UBC9YDL064W ATG29Q12092 213 aa3.63□□□□□ -1.83
UBC9YDL064W RTN2Q12443 393 aa3.63□□□□□ -1.83
UBC9YDL064W SEC39Q12745 709 aa3.63□□□□□ -1.83
UBC9YDL064W YDL007C-AQ2V2Q0 85 aa3.63□□□□□ -1.83
UBC9YDL064W COR1P07256 457 aa3.62□□□□□ -1.83
UBC9YDL064W RPN2P32565 945 aaKnown RBP3.62□□□□□ -1.83
UBC9YDL064W DUG2P38149 878 aa3.62□□□□□ -1.83
UBC9YDL064W BNA4P38169 460 aa3.62□□□□□ -1.83
UBC9YDL064W MUM2P38236 366 aa3.62□□□□□ -1.83
UBC9YDL064W NOC2P39744 710 aaKnown RBP3.62□□□□□ -1.83
UBC9YDL064W SRB7P47822 140 aa3.62□□□□□ -1.83
UBC9YDL064W TWF1P53250 332 aa3.62□□□□□ -1.83
UBC9YDL064W ZPR1P53303 486 aaKnown RBP3.62□□□□□ -1.83
UBC9YDL064W KTR5P53966 522 aaPredicted RBP3.62□□□□□ -1.83
UBC9YDL064W HEF3P53978 1044 aaKnown RBP3.62□□□□□ -1.83
UBC9YDL064W NUP53Q03790 475 aa3.62□□□□□ -1.83
UBC9YDL064W PDS5Q04264 1277 aa3.62□□□□□ -1.83
UBC9YDL064W GLO2Q05584 274 aa3.62□□□□□ -1.83
UBC9YDL064W RRG1Q12167 365 aaPredicted RBP3.62□□□□□ -1.83
UBC9YDL064W ARP6Q12509 438 aa3.62□□□□□ -1.83
UBC9YDL064W RPL31BP0C2H9 113 aaKnown RBP3.61□□□□□ -1.83
UBC9YDL064W APE1P14904 514 aa3.61□□□□□ -1.83
UBC9YDL064W TYR1P20049 452 aa3.61□□□□□ -1.83
UBC9YDL064W SUI2P20459 304 aaKnown RBP3.61□□□□□ -1.83
UBC9YDL064W SAS3P34218 831 aa3.61□□□□□ -1.83
UBC9YDL064W ECM15P35195 104 aa3.61□□□□□ -1.83
UBC9YDL064W MPE1P35728 441 aaKnown RBP3.61□□□□□ -1.83
UBC9YDL064W CMC1P36064 111 aa3.61□□□□□ -1.83
UBC9YDL064W VPS52P39904 641 aa3.61□□□□□ -1.83
UBC9YDL064W YMR147WP40218 223 aaKnown RBP3.61□□□□□ -1.83
UBC9YDL064W SCD6P45978 349 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
UBC9YDL064W YJR154WP47181 346 aa3.61□□□□□ -1.83
UBC9YDL064W SLD5Q03406 294 aa3.61□□□□□ -1.83
UBC9YDL064W YMR155WQ03795 547 aa3.61□□□□□ -1.83
UBC9YDL064W TAP42Q04372 366 aa3.61□□□□□ -1.83
UBC9YDL064W RBS1Q05672 457 aaKnown RBP3.61□□□□□ -1.83
UBC9YDL064W NRT1Q08485 598 aa3.61□□□□□ -1.83
UBC9YDL064W SEC62P21825 274 aa3.6□□□□□ -1.83
UBC9YDL064W MIC60P36112 540 aa3.6□□□□□ -1.83
UBC9YDL064W RIM2P38127 377 aa3.6□□□□□ -1.83
UBC9YDL064W OSH3P38713 996 aaKnown RBP3.6□□□□□ -1.83
UBC9YDL064W UTP9P38882 575 aaKnown RBP3.6□□□□□ -1.83
UBC9YDL064W HXT14P42833 540 aa3.6□□□□□ -1.83
UBC9YDL064W SAD1P43589 448 aa3.6□□□□□ -1.83
UBC9YDL064W ALK1P43633 760 aaKnown RBP3.6□□□□□ -1.83
UBC9YDL064W SLG1P54867 378 aa3.6□□□□□ -1.83
UBC9YDL064W RLI1Q03195 608 aaKnown RBP3.6□□□□□ -1.83
UBC9YDL064W PHO92Q06390 306 aa3.6□□□□□ -1.83
UBC9YDL064W RKM5Q12367 367 aa3.6□□□□□ -1.83
UBC9YDL064W YML133CQ03099 1374 aa3.6□□□□□ -1.83
UBC9YDL064W YLL067CQ07888 1374 aa3.6□□□□□ -1.83
UBC9YDL064W YLL066CQ99208 1374 aa3.6□□□□□ -1.83
UBC9YDL064W MES1P00958 751 aaKnown RBP3.59□□□□□ -1.83
UBC9YDL064W MRS3P10566 314 aa3.59□□□□□ -1.83
UBC9YDL064W PAP1P29468 568 aaKnown RBP3.59□□□□□ -1.83
UBC9YDL064W ATS1P31386 333 aa3.59□□□□□ -1.83
UBC9YDL064W FRE1P32791 686 aa3.59□□□□□ -1.83
UBC9YDL064W VPS17P32913 551 aa3.59□□□□□ -1.83
UBC9YDL064W SEC66P33754 206 aa3.59□□□□□ -1.83
UBC9YDL064W BZZ1P38822 633 aa3.59□□□□□ -1.83
UBC9YDL064W LSM5P40089 93 aaKnown RBP3.59□□□□□ -1.83
UBC9YDL064W YJL068CP40363 299 aa3.59□□□□□ -1.83
UBC9YDL064W GPD2P41911 440 aaKnown RBP3.59□□□□□ -1.83
UBC9YDL064W ALT2P52892 507 aa3.59□□□□□ -1.83
UBC9YDL064W RQC1Q05468 723 aaKnown RBP3.59□□□□□ -1.83
UBC9YDL064W NDD1Q08887 554 aa3.59□□□□□ -1.83
UBC9YDL064W SCM3Q12334 223 aa3.59□□□□□ -1.83
UBC9YDL064W RRD2Q12461 358 aa3.59□□□□□ -1.83
UBC9YDL064W AMD1P15274 810 aaKnown RBP3.58□□□□□ -1.84
UBC9YDL064W FUR1P18562 216 aaKnown RBP3.58□□□□□ -1.84
UBC9YDL064W PPH22P23595 377 aa3.58□□□□□ -1.84
UBC9YDL064W YCR022CP25620 114 aa3.58□□□□□ -1.84
UBC9YDL064W BUD14P27637 709 aa3.58□□□□□ -1.84
UBC9YDL064W ATP11P32453 318 aa3.58□□□□□ -1.84
UBC9YDL064W NPL6P32832 435 aa3.58□□□□□ -1.84
UBC9YDL064W SIP2P34164 415 aaKnown RBP3.58□□□□□ -1.84
UBC9YDL064W RKM3P38222 552 aa3.58□□□□□ -1.84
UBC9YDL064W VMA13P41807 478 aaKnown RBP3.58□□□□□ -1.84
UBC9YDL064W RPA49Q01080 415 aaPredicted RBP3.58□□□□□ -1.84
UBC9YDL064W YLR281CQ05863 155 aa3.58□□□□□ -1.84
UBC9YDL064W SYO1Q07395 620 aa3.58□□□□□ -1.84
UBC9YDL064W RPL3P14126 387 aaKnown RBP3.57□□□□□ -1.84
UBC9YDL064W HXT3P32466 567 aaKnown RBP3.57□□□□□ -1.84
UBC9YDL064W UTR4P32626 227 aa3.57□□□□□ -1.84
UBC9YDL064W GCS1P35197 352 aa3.57□□□□□ -1.84
UBC9YDL064W BYE1P36106 594 aa3.57□□□□□ -1.84
UBC9YDL064W CSM2P40465 213 aa3.57□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms