RNA–Protein interactions for RNA: YDL060W

TSR1, Transcript of Protein required for processing of 20S pre-rRNA in the cytoplasm, yeast

Gene TSR1, Length 2,367 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR1	YDL060W	PIB2	P53191	635 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	YGR066C	P53242	292 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	MFM1	Q02783	413 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	FMP30	Q02883	468 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	RNH1	Q04740	348 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	FAR8	Q05040	523 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	RGC1	Q06108	1083 aa	Known RBP	3.76	□□□□□ -1.81
TSR1	YDL060W	SPH1	Q06160	661 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	PHO92	Q06390	306 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	TCO89	Q08921	799 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	CFT2	Q12102	859 aa	Predicted RBP	3.76	□□□□□ -1.81
TSR1	YDL060W	MDY2	Q12285	212 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	CTF3	Q12748	733 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	DDP1	Q99321	188 aa	Known RBP	3.76	□□□□□ -1.81
TSR1	YDL060W	YRF1-2	P40105	1681 aa		3.76	□□□□□ -1.81
TSR1	YDL060W	JIP3	O13555	125 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	SEC12	P11655	471 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	GCD2	P12754	651 aa	Predicted RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	RRP1	P35178	278 aa	Predicted RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	DAD2	P36162	133 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	AAP1	P37898	856 aa	Known RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	COS111	P38308	924 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	YEL020C	P39994	560 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	IME4	P41833	600 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	MPS3	P47069	682 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	IST1	P53843	298 aa	Predicted RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	FDC1	Q03034	503 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	YLH47	Q06493	454 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	ATG29	Q12092	213 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	NDJ1	Q12366	352 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	PHO84	P25297	587 aa	Known RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	URK1	P27515	501 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	RAD24	P32641	659 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	SUR1	P33300	382 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	LOT5	P34234	306 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	LHS1	P36016	881 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	PXL1	P36166	706 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	SRL3	P36167	246 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	CTP1	P38152	299 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	KSP1	P38691	1029 aa	Known RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	SIP3	P38717	1229 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	STB1	P42845	420 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	RBL2	P48606	106 aa	Known RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	PPM1	Q04081	328 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	RPC11	Q04307	110 aa	Predicted RBP	3.75	□□□□□ -1.81
TSR1	YDL060W	SOV1	Q04748	898 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	HOF1	Q05080	669 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	YPL272C	Q08984	517 aa		3.75	□□□□□ -1.81
TSR1	YDL060W	OM45	P16547	393 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	VPS33	P20795	691 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	SYN8	P31377	255 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	NIP1	P32497	812 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	YEL043W	P32618	956 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	PMT1	P33775	817 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	YSW1	P38280	609 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	OSH3	P38713	996 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	OTU2	P38747	307 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	MTG2	P38860	518 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	MAF1	P41910	395 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	CAK1	P43568	368 aa	Predicted RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	TRS85	P46944	698 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	IDS2	P46958	469 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	RFX1	P48743	811 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	SHE4	P51534	789 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	MNP1	P53163	194 aa	Predicted RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	NMA2	P53204	395 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	ZPR1	P53303	486 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	ESBP6	P53918	673 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	MTG1	Q03151	367 aa	Predicted RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	YDR239C	Q03780	787 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	DON1	Q05610	365 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	VPS38	Q05919	439 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	STE23	Q06010	1027 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	DBP9	Q06218	594 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	ARR3	Q06598	404 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	YIL177C	P40434	1758 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	YJL225C	P40889	1758 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	RPL1A	P0CX43	217 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	RPL1B	P0CX44	217 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	DAP2	P18962	818 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	RPC19	P28000	142 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	LRO1	P40345	661 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	INA22	P40576	216 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	RQC1	Q05468	723 aa	Known RBP	3.74	□□□□□ -1.81
TSR1	YDL060W	COA4	Q05809	96 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	ARO10	Q06408	635 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	YFT2	Q06676	274 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	SWT1	Q12104	458 aa		3.74	□□□□□ -1.81
TSR1	YDL060W	SAC3	P46674	1301 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	GAL80	P04387	435 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	VPS1	P21576	704 aa	Known RBP	3.73	□□□□□ -1.81
TSR1	YDL060W	DAL80	P26343	269 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	SEF1	P34228	1148 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	YHR131C	P38835	850 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	TDA11	P38854	504 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	YJL193W	P39542	402 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	SEC24	P40482	926 aa	Known RBP	3.73	□□□□□ -1.81
TSR1	YDL060W	GCD10	P41814	478 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	ALT2	P52892	507 aa		3.73	□□□□□ -1.81
TSR1	YDL060W	YGR111W	P53265	400 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 81.7 ms