RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeastyeast

Gene PRP11, Length 801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP11YDL043C PLM2Q04383 521 aa3.9□□□□□ -1.79
PRP11YDL043C MGR3Q04472 501 aa3.9□□□□□ -1.79
PRP11YDL043C DYN3Q04949 312 aa3.9□□□□□ -1.79
PRP11YDL043C ATG17Q06410 417 aa3.9□□□□□ -1.79
PRP11YDL043C MCP2Q06567 569 aa3.9□□□□□ -1.79
PRP11YDL043C YPD1Q07688 167 aa3.9□□□□□ -1.79
PRP11YDL043C RIM20Q12033 661 aa3.9□□□□□ -1.79
PRP11YDL043C ACF2Q12168 779 aa3.9□□□□□ -1.79
PRP11YDL043C PAB1P04147 577 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
PRP11YDL043C PUT4P15380 627 aa3.89□□□□□ -1.79
PRP11YDL043C OM45P16547 393 aa3.89□□□□□ -1.79
PRP11YDL043C TRX1P22217 103 aaKnown RBP3.89□□□□□ -1.79
PRP11YDL043C VMA16P23968 213 aa3.89□□□□□ -1.79
PRP11YDL043C GPI10P30777 616 aa3.89□□□□□ -1.79
PRP11YDL043C SOF1P33750 489 aaKnown RBP3.89□□□□□ -1.79
PRP11YDL043C SEC66P33754 206 aa3.89□□□□□ -1.79
PRP11YDL043C YPT52P36018 234 aaKnown RBP3.89□□□□□ -1.79
PRP11YDL043C MSG5P38590 489 aa3.89□□□□□ -1.79
PRP11YDL043C TIF4631P39935 952 aaKnown RBP3.89□□□□□ -1.79
PRP11YDL043C MRX1P40050 688 aa3.89□□□□□ -1.79
PRP11YDL043C BUR6P40096 142 aa3.89□□□□□ -1.79
PRP11YDL043C YJL068CP40363 299 aa3.89□□□□□ -1.79
PRP11YDL043C ULP2P40537 1034 aaPredicted RBP3.89□□□□□ -1.79
PRP11YDL043C OPT1P40897 799 aa3.89□□□□□ -1.79
PRP11YDL043C YFL015CP43578 164 aa3.89□□□□□ -1.79
PRP11YDL043C GCD14P46959 383 aaPredicted RBP3.89□□□□□ -1.79
PRP11YDL043C CTK2P46962 323 aa3.89□□□□□ -1.79
PRP11YDL043C YGR266WP53326 701 aa3.89□□□□□ -1.79
PRP11YDL043C RET3P53600 189 aa3.89□□□□□ -1.79
PRP11YDL043C SUN4P53616 420 aa3.89□□□□□ -1.79
PRP11YDL043C KAP120Q02932 1032 aa3.89□□□□□ -1.79
PRP11YDL043C YMR102CQ03177 834 aa3.89□□□□□ -1.79
PRP11YDL043C HOT1Q03213 719 aa3.89□□□□□ -1.79
PRP11YDL043C HRD3Q05787 833 aa3.89□□□□□ -1.79
PRP11YDL043C ECM22Q05958 814 aaPredicted RBP3.89□□□□□ -1.79
PRP11YDL043C HBT1Q07653 1046 aaKnown RBP3.89□□□□□ -1.79
PRP11YDL043C ABP140Q08641 628 aaKnown RBP3.89□□□□□ -1.79
PRP11YDL043C REX3Q12090 404 aa3.89□□□□□ -1.79
PRP11YDL043C MED2Q12124 431 aa3.89□□□□□ -1.79
PRP11YDL043C AHC1Q12433 566 aa3.89□□□□□ -1.79
PRP11YDL043C AHA1Q12449 350 aaKnown RBP3.89□□□□□ -1.79
PRP11YDL043C YOL159C-AQ3E769 90 aa3.89□□□□□ -1.79
PRP11YDL043C MYO4P32492 1471 aa3.88□□□□□ -1.79
PRP11YDL043C HXK2P04807 486 aaKnown RBP3.88□□□□□ -1.79
PRP11YDL043C RPL7AP05737 244 aaKnown RBP3.88□□□□□ -1.79
PRP11YDL043C NMT1P14743 455 aa3.88□□□□□ -1.79
PRP11YDL043C CLB3P24870 427 aa3.88□□□□□ -1.79
PRP11YDL043C ADK2P26364 225 aa3.88□□□□□ -1.79
PRP11YDL043C KRE2P27809 442 aa3.88□□□□□ -1.79
PRP11YDL043C RPC19P28000 142 aaKnown RBP3.88□□□□□ -1.79
PRP11YDL043C ZIP1P31111 875 aa3.88□□□□□ -1.79
PRP11YDL043C CUE2P36075 443 aaKnown RBP3.88□□□□□ -1.79
PRP11YDL043C CST26P38226 397 aa3.88□□□□□ -1.79
PRP11YDL043C YMR262WP38430 313 aa3.88□□□□□ -1.79
PRP11YDL043C DIA4P38705 446 aaPredicted RBP3.88□□□□□ -1.79
PRP11YDL043C SUR2P38992 349 aa3.88□□□□□ -1.79
PRP11YDL043C LTP1P40347 161 aa3.88□□□□□ -1.79
PRP11YDL043C PCI8P40512 444 aa3.88□□□□□ -1.79
PRP11YDL043C SGN1P40561 250 aaKnown RBP RIP-Chip data3.88□□□□□ -1.79not detected
PRP11YDL043C EPL1P43572 832 aa3.88□□□□□ -1.79
PRP11YDL043C FYV8P46949 817 aaKnown RBP3.88□□□□□ -1.79
PRP11YDL043C LIA1P47120 325 aaKnown RBP3.88□□□□□ -1.79
PRP11YDL043C MLC1P53141 149 aa3.88□□□□□ -1.79
PRP11YDL043C RPN14P53196 417 aa3.88□□□□□ -1.79
PRP11YDL043C MRPL50P53724 139 aa3.88□□□□□ -1.79
PRP11YDL043C BET4Q00618 327 aa3.88□□□□□ -1.79
PRP11YDL043C AAT1Q01802 451 aa3.88□□□□□ -1.79
PRP11YDL043C FMP30Q02883 468 aa3.88□□□□□ -1.79
PRP11YDL043C RMT2Q03305 412 aa3.88□□□□□ -1.79
PRP11YDL043C RBA50Q04418 439 aa3.88□□□□□ -1.79
PRP11YDL043C ARG7Q04728 441 aa3.88□□□□□ -1.79
PRP11YDL043C VPS38Q05919 439 aa3.88□□□□□ -1.79
PRP11YDL043C MMR1Q06324 491 aa3.88□□□□□ -1.79
PRP11YDL043C RPL7BQ12213 244 aaKnown RBP3.88□□□□□ -1.79
PRP11YDL043C IES3Q12345 250 aa3.88□□□□□ -1.79
PRP11YDL043C AVL9Q12500 764 aa3.88□□□□□ -1.79
PRP11YDL043C PDR18P53756 1333 aa3.88□□□□□ -1.79
PRP11YDL043C MF(ALPHA)1P01149 165 aa3.87□□□□□ -1.79
PRP11YDL043C HIS3P06633 220 aa3.87□□□□□ -1.79
PRP11YDL043C ISY1P21374 235 aaPredicted RBP3.87□□□□□ -1.79
PRP11YDL043C ADH7P25377 361 aa3.87□□□□□ -1.79
PRP11YDL043C YME1P32795 747 aa3.87□□□□□ -1.79
PRP11YDL043C VMA22P38784 181 aa3.87□□□□□ -1.79
PRP11YDL043C UIP3P39547 235 aa3.87□□□□□ -1.79
PRP11YDL043C ECM10P39987 644 aa3.87□□□□□ -1.79
PRP11YDL043C ASG1P40467 964 aa3.87□□□□□ -1.79
PRP11YDL043C YRB2P40517 327 aa3.87□□□□□ -1.79
PRP11YDL043C DOT5P40553 215 aa3.87□□□□□ -1.79
PRP11YDL043C TDA10P42938 290 aa3.87□□□□□ -1.79
PRP11YDL043C AIP1P46680 615 aaKnown RBP3.87□□□□□ -1.79
PRP11YDL043C DPB11P47027 764 aaPredicted RBP3.87□□□□□ -1.79
PRP11YDL043C IRC8P47046 822 aa3.87□□□□□ -1.79
PRP11YDL043C COX16P47081 118 aa3.87□□□□□ -1.79
PRP11YDL043C RPS7BP48164 190 aaKnown RBP3.87□□□□□ -1.79
PRP11YDL043C ASN1P49089 572 aaKnown RBP3.87□□□□□ -1.79
PRP11YDL043C BOP3P53958 396 aa3.87□□□□□ -1.79
PRP11YDL043C TIM44Q01852 431 aa3.87□□□□□ -1.79
PRP11YDL043C IRC4Q03036 179 aa3.87□□□□□ -1.79
PRP11YDL043C MRPS17Q03246 237 aaPredicted RBP3.87□□□□□ -1.79
PRP11YDL043C RVB1Q03940 463 aaKnown RBP3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms