RNA–Protein interactions for RNA: YBR028C

YPK3, Transcript of AGC kinase, yeast

Gene YPK3, Length 1,578 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPK3	YBR028C	YML133C	Q03099	1374 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	YLL067C	Q07888	1374 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	YLL066C	Q99208	1374 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	COR1	P07256	457 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	RPL31B	P0C2H9	113 aa	Known RBP	4.62	□□□□□ -1.67
YPK3	YBR028C	RPC53	P25441	422 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	BUD14	P27637	709 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	SHP1	P34223	423 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	ARC40	P38328	384 aa	Known RBP	4.62	□□□□□ -1.67
YPK3	YBR028C	TIF4631	P39935	952 aa	Known RBP	4.62	□□□□□ -1.67
YPK3	YBR028C	YJR154W	P47181	346 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	HEF3	P53978	1044 aa	Known RBP	4.62	□□□□□ -1.67
YPK3	YBR028C	SLG1	P54867	378 aa		4.62	□□□□□ -1.67
YPK3	YBR028C	YCR043C	P25361	127 aa		4.61	□□□□□ -1.67
YPK3	YBR028C	TCM62	P38228	572 aa	Known RBP	4.61	□□□□□ -1.67
YPK3	YBR028C	AXL1	P40851	1208 aa		4.61	□□□□□ -1.67
YPK3	YBR028C	GUF1	P46943	645 aa		4.61	□□□□□ -1.67
YPK3	YBR028C	SNA4	Q07549	140 aa		4.61	□□□□□ -1.67
YPK3	YBR028C	PAP1	P29468	568 aa	Known RBP	4.61	□□□□□ -1.67
YPK3	YBR028C	MSN2	P33748	704 aa		4.61	□□□□□ -1.67
YPK3	YBR028C	MBB1	P39534	108 aa		4.61	□□□□□ -1.67
YPK3	YBR028C	VMA13	P41807	478 aa	Known RBP	4.61	□□□□□ -1.67
YPK3	YBR028C	ATG27	P46989	271 aa		4.61	□□□□□ -1.67
YPK3	YBR028C	SUC2	P00724	532 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	TYR1	P20049	452 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	HXT3	P32466	567 aa	Known RBP	4.6	□□□□□ -1.67
YPK3	YBR028C	BNA4	P38169	460 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	OTU2	P38747	307 aa	Known RBP	4.6	□□□□□ -1.67
YPK3	YBR028C	YPL068C	Q02749	293 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	MSS11	Q03825	758 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	YDR131C	Q03899	556 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	FMP45	Q07651	309 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	PDH1	Q12428	516 aa	Known RBP	4.6	□□□□□ -1.67
YPK3	YBR028C	ARP6	Q12509	438 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	ISN1	Q99312	450 aa		4.6	□□□□□ -1.67
YPK3	YBR028C	BAR1	P12630	587 aa		4.59	□□□□□ -1.67
YPK3	YBR028C	HNM1	P19807	563 aa		4.59	□□□□□ -1.67
YPK3	YBR028C	CLB3	P24870	427 aa		4.59	□□□□□ -1.67
YPK3	YBR028C	ACH1	P32316	526 aa		4.59	□□□□□ -1.67
YPK3	YBR028C	DUG2	P38149	878 aa		4.59	□□□□□ -1.67
YPK3	YBR028C	YMR147W	P40218	223 aa	Known RBP	4.59	□□□□□ -1.67
YPK3	YBR028C	TES1	P41903	349 aa	Known RBP	4.59	□□□□□ -1.67
YPK3	YBR028C	ARX1	Q03862	593 aa	Known RBP	4.59	□□□□□ -1.67
YPK3	YBR028C	YMR087W	Q04299	284 aa		4.59	□□□□□ -1.67
YPK3	YBR028C	THI20	Q08224	551 aa		4.59	□□□□□ -1.67
YPK3	YBR028C	RAV1	P47104	1357 aa		4.59	□□□□□ -1.68
YPK3	YBR028C	RPL3	P14126	387 aa	Known RBP	4.58	□□□□□ -1.68
YPK3	YBR028C	PDX1	P16451	410 aa		4.58	□□□□□ -1.68
YPK3	YBR028C	AZF1	P41696	914 aa		4.58	□□□□□ -1.68
YPK3	YBR028C	ALT2	P52892	507 aa		4.58	□□□□□ -1.68
YPK3	YBR028C	YGL108C	P53139	140 aa		4.58	□□□□□ -1.68
YPK3	YBR028C	SRL1	Q08673	210 aa		4.58	□□□□□ -1.68
YPK3	YBR028C	ERP4	Q12450	207 aa		4.58	□□□□□ -1.68
YPK3	YBR028C	PPZ1	P26570	692 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	ERG1	P32476	496 aa	Known RBP	4.57	□□□□□ -1.68
YPK3	YBR028C	RAD24	P32641	659 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	MET30	P39014	640 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	YIL169C	P40442	995 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	DLD2	P46681	530 aa	Known RBP	4.57	□□□□□ -1.68
YPK3	YBR028C	ZPR1	P53303	486 aa	Known RBP	4.57	□□□□□ -1.68
YPK3	YBR028C	TDA7	P53882	636 aa	Predicted RBP	4.57	□□□□□ -1.68
YPK3	YBR028C	KTR5	P53966	522 aa	Predicted RBP	4.57	□□□□□ -1.68
YPK3	YBR028C	SAM50	P53969	484 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	MPS1	P54199	764 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	RBA50	Q04418	439 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	YLR352W	Q06479	807 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	RRD2	Q12461	358 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	YRF1-4	O13559	1382 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	PPH22	P23595	377 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	SNT1	P25357	1226 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	SPB1	P25582	841 aa	Predicted RBP	4.57	□□□□□ -1.68
YPK3	YBR028C	TMT1	P32643	299 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	YND1	P40009	630 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	YIR014W	P40570	242 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	CSR2	Q12734	1121 aa		4.57	□□□□□ -1.68
YPK3	YBR028C	APE1	P14904	514 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	GLN3	P18494	730 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	ADK2	P26364	225 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	ATP11	P32453	318 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	ECM15	P35195	104 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	MIC60	P36112	540 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	RIP-Chip
YPK3	YBR028C	BNI5	P53890	448 aa	Known RBP	4.56	□□□□□ -1.68
YPK3	YBR028C	YDR415C	Q04033	374 aa	Predicted RBP	4.56	□□□□□ -1.68
YPK3	YBR028C	GLO2	Q05584	274 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	ICT1	Q12385	394 aa		4.56	□□□□□ -1.68
YPK3	YBR028C	MES1	P00958	751 aa	Known RBP	4.55	□□□□□ -1.68
YPK3	YBR028C	YIM1	P28625	365 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	STB6	P36085	766 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	TUL1	P36096	758 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	OSH3	P38713	996 aa	Known RBP	4.55	□□□□□ -1.68
YPK3	YBR028C	YGR149W	P48236	432 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	SLD5	Q03406	294 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	FMP42	Q04991	504 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	YLR345W	Q06137	509 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	VTA1	Q06263	330 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	PHO92	Q06390	306 aa		4.55	□□□□□ -1.68
YPK3	YBR028C	RPN2	P32565	945 aa	Known RBP	4.54	□□□□□ -1.68
YPK3	YBR028C	RML2	P32611	393 aa		4.54	□□□□□ -1.68
YPK3	YBR028C	UTR4	P32626	227 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 119.4 ms