RNA–Protein interactions for RNA: YBL031W

SHE1, Transcript of Mitotic spindle protein, yeast

Gene SHE1, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE1	YBL031W	VTI1	Q04338	217 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	TDA9	Q04545	1251 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	MFB1	Q04922	465 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	FUS2	Q05670	677 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	ORM2	Q06144	216 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	CIR2	Q08822	631 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	APL4	Q12028	832 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	YLR111W	Q12528	110 aa		4.39	□□□□□ -1.71
SHE1	YBL031W	YIL177C	P40434	1758 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	YJL225C	P40889	1758 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	TY1B-A	O13527	1196 aa	Known RBP	4.38	□□□□□ -1.71
SHE1	YBL031W	PWP1	P21304	576 aa	Known RBP	4.38	□□□□□ -1.71
SHE1	YBL031W	VPS1	P21576	704 aa	Known RBP	4.38	□□□□□ -1.71
SHE1	YBL031W	ADH7	P25377	361 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	YIH1	P25637	258 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	AUR1	P36107	401 aa	Predicted RBP	4.38	□□□□□ -1.71
SHE1	YBL031W	RPC37	P36121	282 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	UBP13	P38187	747 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	SPP381	P38282	291 aa	Predicted RBP	4.38	□□□□□ -1.71
SHE1	YBL031W	CDC1	P40986	491 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	MRX6	P48564	524 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	SOL4	P53315	255 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	ARE2	P53629	642 aa	Known RBP	4.38	□□□□□ -1.71
SHE1	YBL031W	TOF1	P53840	1238 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	NGL3	Q03210	505 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	YML037C	Q03703	340 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	ARP9	Q05123	467 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	TPO3	Q06451	622 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	CUR1	Q06469	252 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	OSW1	Q08692	278 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	INP53	Q12271	1107 aa		4.38	□□□□□ -1.71
SHE1	YBL031W	MDM10	P18409	493 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	PGS1	P25578	521 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	BLI1	P35727	113 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	YKL050C	P35736	922 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	SNU114	P36048	1008 aa	Known RBP	4.37	□□□□□ -1.71
SHE1	YBL031W	ERV46	P39727	415 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	TPA1	P40032	644 aa	Known RBP	4.37	□□□□□ -1.71
SHE1	YBL031W	CIN1	P40987	1014 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	RMD8	P43620	662 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	TRS85	P46944	698 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	CTK3	P46963	296 aa	Predicted RBP	4.37	□□□□□ -1.71
SHE1	YBL031W	RPC17	P47076	161 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	RPS7B	P48164	190 aa	Known RBP	4.37	□□□□□ -1.71
SHE1	YBL031W	GLO1	P50107	326 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	DIA3	P52290	468 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	YGR066C	P53242	292 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	BTN2	P53286	410 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	YPR003C	P53394	754 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	ATP23	P53722	227 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	MRPL19	P53875	158 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	SNU56	Q03782	492 aa	Known RBP	4.37	□□□□□ -1.71
SHE1	YBL031W	RRB1	Q04225	511 aa	Known RBP	4.37	□□□□□ -1.71
SHE1	YBL031W	BUD22	Q04347	519 aa	Known RBP	4.37	□□□□□ -1.71
SHE1	YBL031W	YLR455W	Q06188	304 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	YLH47	Q06493	454 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	YAP7	Q08182	245 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	YLR049C	Q12110	428 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	SCM3	Q12334	223 aa		4.37	□□□□□ -1.71
SHE1	YBL031W	RNA1	P11745	407 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	RAP1	P11938	827 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	HOM2	P13663	365 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	CBS1	P14066	229 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	SPO12	P17123	173 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	ISY1	P21374	235 aa	Predicted RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	PSO2	P30620	661 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	GCG1	P32656	232 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	YME1	P32795	747 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	NIP100	P33420	868 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	OCT1	P35999	772 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	FLO10	P36170	1169 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	CST26	P38226	397 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	YSW1	P38280	609 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	IMD2	P38697	523 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	SMF1	P38925	575 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	RIO2	P40160	425 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	SEC9	P40357	651 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	CSM2	P40465	213 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	YFR020W	P43600	232 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	IMD3	P50095	523 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	CWC22	P53333	577 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	JJJ1	P53863	590 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	ESBP6	P53918	673 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	SMD2	Q06217	110 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	YEH1	Q07804	573 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	RLP24	Q07915	199 aa	Known RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	YPL272C	Q08984	517 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	TAF10	Q12030	206 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	RRG1	Q12167	365 aa	Predicted RBP	4.36	□□□□□ -1.71
SHE1	YBL031W	HIF1	Q12373	385 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	YJR112W-A	Q3E743	109 aa		4.36	□□□□□ -1.71
SHE1	YBL031W	YRF1-3	P0CX14	1859 aa		4.35	□□□□□ -1.71
SHE1	YBL031W	YRF1-7	P0CX15	1859 aa		4.35	□□□□□ -1.71
SHE1	YBL031W	YRF1-6	P53819	1859 aa		4.35	□□□□□ -1.71
SHE1	YBL031W	POL4	P25615	582 aa		4.35	□□□□□ -1.71
SHE1	YBL031W	ORC2	P32833	620 aa		4.35	□□□□□ -1.71
SHE1	YBL031W	LOS1	P33418	1100 aa	Predicted RBP	4.35	□□□□□ -1.71
SHE1	YBL031W	LAS1	P36146	502 aa	Predicted RBP	4.35	□□□□□ -1.71
SHE1	YBL031W	REG2	P38232	338 aa		4.35	□□□□□ -1.71
SHE1	YBL031W	ARN1	P38731	627 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms