RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 GYS2P54840 703 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 PABPC4Q13310 644 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00557-201ENST00000563184 STYK1Q6J9G0 422 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 SLCO6A1Q86UG4 719 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 PTPRN2Q92932 1015 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 SP110Q9HB58 689 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 TRIM39Q9HCM9 518 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 MBNL3Q9NUK0 354 aaKnown RBP8.18□□□□□ -1.1
LINC00557-201ENST00000563184 TNFRSF10DQ9UBN6 386 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00557-201ENST00000563184 TRAF6Q9Y4K3 522 aa8.18□□□□□ -1.1
LINC00557-201ENST00000563184 MSCO60682 206 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 USP2O75604 605 aaPredicted RBP8.17□□□□□ -1.1
LINC00557-201ENST00000563184 TBC1D8O95759 1140 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 EFEMP2O95967 443 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 CANXP27824 592 aaKnown RBP8.17□□□□□ -1.1
LINC00557-201ENST00000563184 DUSP4Q13115 394 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 KCNAB2Q13303 367 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 LAPTM5Q13571 262 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 PLCL1Q15111 1095 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 RSPO2Q6UXX9 243 aaPredicted RBP8.17□□□□□ -1.1
LINC00557-201ENST00000563184 MAMDC2Q7Z304 686 aaPredicted RBP8.17□□□□□ -1.1
LINC00557-201ENST00000563184 RCBTB1Q8NDN9 531 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 DIO2Q92813 273 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 JMJD8Q96S16 334 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 NDOR1Q9UHB4 597 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 SFMBT1Q9UHJ3 866 aa8.17□□□□□ -1.1
LINC00557-201ENST00000563184 TRBV23OR9-2A0A075B6M9 112 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.16□□□□□ -1.1
LINC00557-201ENST00000563184 NOTOA8MTQ0 251 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 RNASE1P07998 156 aaKnown RBP8.16□□□□□ -1.1
LINC00557-201ENST00000563184 KIR2DL1P43626 348 aaPredicted RBP8.16□□□□□ -1.1
LINC00557-201ENST00000563184 KIR2DL2P43627 348 aaPredicted RBP8.16□□□□□ -1.1
LINC00557-201ENST00000563184 HK2P52789 917 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 HLA-DQA1Q5Y7H0 255 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 MCTP1Q6DN14 999 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 BRAPQ7Z569 592 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 TP53INP2Q8IXH6 220 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 PI4K2BQ8TCG2 481 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 NINJ1Q92982 152 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 SCLYQ96I15 445 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 GPR27Q9NS67 375 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 FBXL7Q9UJT9 491 aa8.16□□□□□ -1.1
LINC00557-201ENST00000563184 C7orf72A4D263 438 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 SDSP20132 328 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 ERVFC1P60507 584 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 IQCEQ6IPM2 695 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 FGD2Q7Z6J4 655 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 AGBL5Q8NDL9 886 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 DPF3Q92784 378 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 SYTL4Q96C24 671 aaPredicted RBP8.15□□□□□ -1.1
LINC00557-201ENST00000563184 PLAAQ9Y263 795 aa8.15□□□□□ -1.1
LINC00557-201ENST00000563184 OAS3Q9Y6K5 1087 aaKnown RBP8.15□□□□□ -1.1
LINC00557-201ENST00000563184 PPP1R11O60927 126 aaPredicted RBP8.14□□□□□ -1.11
LINC00557-201ENST00000563184 EFCAB14O75071 495 aa8.14□□□□□ -1.11
LINC00557-201ENST00000563184 DNAJC8O75937 253 aaPredicted RBP8.14□□□□□ -1.11
LINC00557-201ENST00000563184 CLSTN1O94985 981 aa8.14□□□□□ -1.11
LINC00557-201ENST00000563184 IRAK1P51617 712 aa8.14□□□□□ -1.11
LINC00557-201ENST00000563184 GPR85P60893 370 aa8.14□□□□□ -1.11
LINC00557-201ENST00000563184 ZNF792Q3KQV3 632 aa8.14□□□□□ -1.11
LINC00557-201ENST00000563184 ANKS4BQ8N8V4 417 aa8.14□□□□□ -1.11
LINC00557-201ENST00000563184 PDZD8Q8NEN9 1154 aa8.14□□□□□ -1.11
LINC00557-201ENST00000563184 A0A1W2PQ45 241 aaPredicted RBP8.13□□□□□ -1.11
LINC00557-201ENST00000563184 A0A1W2PQY0 241 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 RASGRP1O95267 797 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 HPXP02790 462 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 GDNFP39905 211 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 RTP1P59025 263 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 KIR3DS1Q14943 382 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 HSF5Q4G112 596 aaPredicted RBP8.13□□□□□ -1.11
LINC00557-201ENST00000563184 TM4SF20Q53R12 229 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 CEP128Q6ZU80 1094 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 DHX37Q8IY37 1157 aaKnown RBP8.13□□□□□ -1.11
LINC00557-201ENST00000563184 NIM1KQ8IY84 436 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 ABI1Q8IZP0 508 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 ZFYVE21Q9BQ24 234 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 PLCD4Q9BRC7 762 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 CTNND2Q9UQB3 1225 aa8.13□□□□□ -1.11
LINC00557-201ENST00000563184 FAM83GA6ND36 823 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 AQP7O14520 342 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
LINC00557-201ENST00000563184 CRTAMO95727 393 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 LBX2Q6XYB7 198 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 NLRP10Q86W26 655 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 IFNL3Q8IZI9 196 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.12□□□□□ -1.11
LINC00557-201ENST00000563184 MFSD3Q96ES6 412 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 SLKQ9H2G2 1235 aaPredicted RBP8.12□□□□□ -1.11
LINC00557-201ENST00000563184 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 PCDHA9Q9Y5H5 950 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 PCDHA2Q9Y5H9 948 aa8.12□□□□□ -1.11
LINC00557-201ENST00000563184 NRDCO43847 1150 aa8.11□□□□□ -1.11
LINC00557-201ENST00000563184 MSL3P1P0C860 447 aa8.11□□□□□ -1.11
LINC00557-201ENST00000563184 TRHRP34981 398 aaPredicted RBP8.11□□□□□ -1.11
LINC00557-201ENST00000563184 CHRNEQ04844 493 aa8.11□□□□□ -1.11
LINC00557-201ENST00000563184 NR0B2Q15466 257 aa8.11□□□□□ -1.11
LINC00557-201ENST00000563184 JAMLQ86YT9 394 aa8.11□□□□□ -1.11
LINC00557-201ENST00000563184 ASIC4Q96FT7 647 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms