RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W PHM8P40025 321 aa8.93□□□□□ -0.98
SFP1YLR403W PFK26P40433 827 aaKnown RBP8.93□□□□□ -0.98
SFP1YLR403W YFL034WP43564 1073 aa8.93□□□□□ -0.98
SFP1YLR403W CCC1P47818 322 aa8.93□□□□□ -0.98
SFP1YLR403W NBP1P52919 319 aaPredicted RBP8.93□□□□□ -0.98
SFP1YLR403W ADE16P54113 591 aaKnown RBP8.93□□□□□ -0.98
SFP1YLR403W EEB1Q02891 456 aa8.93□□□□□ -0.98
SFP1YLR403W MRPS17Q03246 237 aaPredicted RBP8.93□□□□□ -0.98
SFP1YLR403W TRE2Q08693 809 aa8.93□□□□□ -0.98
SFP1YLR403W GET3Q12154 354 aaKnown RBP8.93□□□□□ -0.98
SFP1YLR403W INO1P11986 533 aa8.93□□□□□ -0.98
SFP1YLR403W MGR1P25573 417 aa8.93□□□□□ -0.98
SFP1YLR403W MSS1P32559 526 aaPredicted RBP8.93□□□□□ -0.98
SFP1YLR403W SCM4P32564 187 aa8.93□□□□□ -0.98
SFP1YLR403W PTC1P35182 281 aa8.93□□□□□ -0.98
SFP1YLR403W YBR137WP38276 179 aa8.93□□□□□ -0.98
SFP1YLR403W KSP1P38691 1029 aaKnown RBP8.93□□□□□ -0.98
SFP1YLR403W RRP3P38712 501 aaKnown RBP8.93□□□□□ -0.98
SFP1YLR403W AIM18P38884 321 aa8.93□□□□□ -0.98
SFP1YLR403W MMF1P40185 145 aaKnown RBP8.93□□□□□ -0.98
SFP1YLR403W MAM33P40513 266 aa8.93□□□□□ -0.98
SFP1YLR403W VHR1P40522 640 aa8.93□□□□□ -0.98
SFP1YLR403W LOH1P47055 219 aa8.93□□□□□ -0.98
SFP1YLR403W DOC1P53068 250 aa8.93□□□□□ -0.98
SFP1YLR403W SLX9P53251 210 aaPredicted RBP8.93□□□□□ -0.98
SFP1YLR403W UME1Q03010 460 aa8.93□□□□□ -0.98
SFP1YLR403W EBS1Q03466 884 aaKnown RBP8.93□□□□□ -0.98
SFP1YLR403W BDS1Q08347 646 aa8.93□□□□□ -0.98
SFP1YLR403W MRP1P10662 321 aaKnown RBP8.92□□□□□ -0.98
SFP1YLR403W YIM1P28625 365 aa8.92□□□□□ -0.98
SFP1YLR403W MKS1P34072 584 aa8.92□□□□□ -0.98
SFP1YLR403W SIP2P34164 415 aaKnown RBP8.92□□□□□ -0.98
SFP1YLR403W PAC1P39946 494 aaKnown RBP8.92□□□□□ -0.98
SFP1YLR403W TMA108P40462 946 aa8.92□□□□□ -0.98
SFP1YLR403W AMA1P50082 593 aa8.92□□□□□ -0.98
SFP1YLR403W ORC5P50874 479 aa8.92□□□□□ -0.98
SFP1YLR403W PMT5P52867 743 aa8.92□□□□□ -0.98
SFP1YLR403W CPR6P53691 371 aaKnown RBP8.92□□□□□ -0.98
SFP1YLR403W OST6Q03723 332 aa8.92□□□□□ -0.98
SFP1YLR403W GSF2Q04697 403 aaKnown RBP8.92□□□□□ -0.98
SFP1YLR403W YNG1Q08465 219 aa8.92□□□□□ -0.98
SFP1YLR403W UAF30Q08747 228 aa8.92□□□□□ -0.98
SFP1YLR403W NDI1P32340 513 aa8.92□□□□□ -0.98
SFP1YLR403W AKR1P39010 764 aa8.92□□□□□ -0.98
SFP1YLR403W EXO1P39875 702 aa8.92□□□□□ -0.98
SFP1YLR403W RPN3P40016 523 aaKnown RBP8.92□□□□□ -0.98
SFP1YLR403W ATM1P40416 690 aa8.92□□□□□ -0.98
SFP1YLR403W TIR3P40552 269 aa8.92□□□□□ -0.98
SFP1YLR403W SKP2P42843 763 aa8.92□□□□□ -0.98
SFP1YLR403W HPC2Q01448 625 aa8.92□□□□□ -0.98
SFP1YLR403W CSN9Q03981 162 aa8.92□□□□□ -0.98
SFP1YLR403W GIM5Q04493 163 aa8.92□□□□□ -0.98
SFP1YLR403W YPR147CQ06522 304 aaKnown RBP8.92□□□□□ -0.98
SFP1YLR403W CDA2Q06703 312 aa8.92□□□□□ -0.98
SFP1YLR403W ATG20Q07528 640 aa8.92□□□□□ -0.98
SFP1YLR403W THI21Q08975 551 aa8.92□□□□□ -0.98
SFP1YLR403W TY3A-GQ12173 290 aa8.92□□□□□ -0.98
SFP1YLR403W HAL9Q12180 1030 aa8.92□□□□□ -0.98
SFP1YLR403W HER1Q12276 1246 aa8.92□□□□□ -0.98
SFP1YLR403W TY3A-IQ99219 290 aa8.92□□□□□ -0.98
SFP1YLR403W SPO11P23179 398 aa8.91□□□□□ -0.98
SFP1YLR403W AAT2P23542 418 aaKnown RBP8.91□□□□□ -0.98
SFP1YLR403W SSH4P32343 579 aa8.91□□□□□ -0.98
SFP1YLR403W GSP1P32835 219 aaKnown RBP8.91□□□□□ -0.98
SFP1YLR403W GSP2P32836 220 aaKnown RBP8.91□□□□□ -0.98
SFP1YLR403W SEF1P34228 1148 aa8.91□□□□□ -0.98
SFP1YLR403W YHR078WP38799 552 aa8.91□□□□□ -0.98
SFP1YLR403W SPC97P38863 823 aa8.91□□□□□ -0.98
SFP1YLR403W YEN1P40028 759 aa8.91□□□□□ -0.98
SFP1YLR403W DOT5P40553 215 aa8.91□□□□□ -0.98
SFP1YLR403W CIT3P43635 486 aa8.91□□□□□ -0.98
SFP1YLR403W CWC23P52868 283 aaPredicted RBP8.91□□□□□ -0.98
SFP1YLR403W MYO5Q04439 1219 aaKnown RBP8.91□□□□□ -0.98
SFP1YLR403W YDL129WQ07555 291 aa8.91□□□□□ -0.98
SFP1YLR403W SMF3Q12078 473 aaPredicted RBP8.91□□□□□ -0.98
SFP1YLR403W YPR063CQ12160 140 aa8.91□□□□□ -0.98
SFP1YLR403W ZRT2Q12436 422 aa8.91□□□□□ -0.98
SFP1YLR403W PET54P10834 293 aa8.9□□□□□ -0.98
SFP1YLR403W CCA1P21269 546 aa8.9□□□□□ -0.98
SFP1YLR403W SED4P25365 1065 aa8.9□□□□□ -0.98
SFP1YLR403W NDC1P32500 655 aa8.9□□□□□ -0.98
SFP1YLR403W CBT1P36038 271 aaPredicted RBP8.9□□□□□ -0.98
SFP1YLR403W PBP2P38151 413 aaKnown RBP RIP-Chip data8.9□□□□□ -0.98not detected
SFP1YLR403W POP4P38336 279 aa8.9□□□□□ -0.98
SFP1YLR403W MSC7P38694 644 aa8.9□□□□□ -0.98
SFP1YLR403W ATG7P38862 630 aa8.9□□□□□ -0.98
SFP1YLR403W VPS45P38932 577 aa8.9□□□□□ -0.98
SFP1YLR403W IDP2P41939 412 aa8.9□□□□□ -0.98
SFP1YLR403W GNA1P43577 159 aaPredicted RBP8.9□□□□□ -0.98
SFP1YLR403W PYK2P52489 506 aaKnown RBP8.9□□□□□ -0.98
SFP1YLR403W PPT1P53043 513 aa8.9□□□□□ -0.98
SFP1YLR403W RPN14P53196 417 aa8.9□□□□□ -0.98
SFP1YLR403W VOA1P53262 265 aa8.9□□□□□ -0.98
SFP1YLR403W OCA2P53949 197 aa8.9□□□□□ -0.98
SFP1YLR403W UBX4P54730 416 aa8.9□□□□□ -0.98
SFP1YLR403W RFU1Q08003 200 aa8.9□□□□□ -0.98
SFP1YLR403W ALE1Q08548 619 aa8.9□□□□□ -0.98
SFP1YLR403W HOS1Q12214 470 aa8.9□□□□□ -0.98
SFP1YLR403W YOL107WQ12239 342 aa8.9□□□□□ -0.98
SFP1YLR403W FYV7Q12247 151 aa8.9□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms