RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W LAS1P36146 502 aaPredicted RBP2.4□□□□□ -2.02
SNU114YKL173W AAP1P37898 856 aaKnown RBP2.4□□□□□ -2.02
SNU114YKL173W TDA10P42938 290 aa2.4□□□□□ -2.02
SNU114YKL173W FYV8P46949 817 aaKnown RBP2.4□□□□□ -2.02
SNU114YKL173W YJL055WP47044 245 aa2.4□□□□□ -2.02
SNU114YKL173W STR3P53101 465 aaKnown RBP2.4□□□□□ -2.02
SNU114YKL173W YGR066CP53242 292 aa2.4□□□□□ -2.02
SNU114YKL173W ART5P53244 586 aaKnown RBP2.4□□□□□ -2.02
SNU114YKL173W RAD33Q04231 177 aa2.4□□□□□ -2.02
SNU114YKL173W PML1Q07930 204 aaPredicted RBP2.4□□□□□ -2.02
SNU114YKL173W TCO89Q08921 799 aa2.4□□□□□ -2.02
SNU114YKL173W ULA1Q12059 462 aa2.4□□□□□ -2.02
SNU114YKL173W NUP188P52593 1655 aaKnown RBP2.4□□□□□ -2.03
SNU114YKL173W CHO2P05374 869 aaKnown RBP2.4□□□□□ -2.03
SNU114YKL173W TPK2P06245 380 aa2.4□□□□□ -2.03
SNU114YKL173W PET111P08468 800 aa2.4□□□□□ -2.03
SNU114YKL173W MDH1P17505 334 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SNU114YKL173W GLK1P17709 500 aaKnown RBP2.4□□□□□ -2.03
SNU114YKL173W PDE1P22434 369 aa2.4□□□□□ -2.03
SNU114YKL173W APN1P22936 367 aa2.4□□□□□ -2.03
SNU114YKL173W SPO11P23179 398 aa2.4□□□□□ -2.03
SNU114YKL173W PRE8P23639 250 aa2.4□□□□□ -2.03
SNU114YKL173W CLB3P24870 427 aa2.4□□□□□ -2.03
SNU114YKL173W PRD1P25375 712 aa2.4□□□□□ -2.03
SNU114YKL173W PEX2P32800 271 aa2.4□□□□□ -2.03
SNU114YKL173W CCL1P37366 393 aa2.4□□□□□ -2.03
SNU114YKL173W GDI1P39958 451 aaKnown RBP2.4□□□□□ -2.03
SNU114YKL173W MRX1P40050 688 aa2.4□□□□□ -2.03
SNU114YKL173W BNA3P47039 444 aaKnown RBP2.4□□□□□ -2.03
SNU114YKL173W RPS7BP48164 190 aaKnown RBP2.4□□□□□ -2.03
SNU114YKL173W TWF1P53250 332 aa2.4□□□□□ -2.03
SNU114YKL173W MAK10Q02197 733 aa2.4□□□□□ -2.03
SNU114YKL173W RSM28Q03430 361 aa2.4□□□□□ -2.03
SNU114YKL173W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.4□□□□□ -2.03not detected
SNU114YKL173W YPT1P01123 206 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W AAC1P04710 309 aa2.39□□□□□ -2.03
SNU114YKL173W SES1P07284 462 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W VMA2P16140 517 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W GCD7P32502 381 aaPredicted RBP2.39□□□□□ -2.03
SNU114YKL173W IME2P32581 645 aa2.39□□□□□ -2.03
SNU114YKL173W SSE2P32590 693 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W NIP100P33420 868 aa2.39□□□□□ -2.03
SNU114YKL173W KES1P35844 434 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W EXO1P39875 702 aa2.39□□□□□ -2.03
SNU114YKL173W SSU1P41930 458 aa2.39□□□□□ -2.03
SNU114YKL173W YFR020WP43600 232 aa2.39□□□□□ -2.03
SNU114YKL173W RPS10BP46784 105 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W ADE16P54113 591 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W COQ9Q05779 260 aa2.39□□□□□ -2.03
SNU114YKL173W HRD3Q05787 833 aa2.39□□□□□ -2.03
SNU114YKL173W THI7Q05998 598 aa2.39□□□□□ -2.03
SNU114YKL173W SMD2Q06217 110 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W RPL1AP0CX43 217 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W RPL1BP0CX44 217 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W REC107P21651 314 aa2.39□□□□□ -2.03
SNU114YKL173W PUP3P25451 205 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W DAL80P26343 269 aa2.39□□□□□ -2.03
SNU114YKL173W GSH1P32477 678 aa2.39□□□□□ -2.03
SNU114YKL173W RML2P32611 393 aa2.39□□□□□ -2.03
SNU114YKL173W UIP5P36137 443 aa2.39□□□□□ -2.03
SNU114YKL173W PXL1P36166 706 aa2.39□□□□□ -2.03
SNU114YKL173W YSW1P38280 609 aa2.39□□□□□ -2.03
SNU114YKL173W RRT2P38332 387 aa2.39□□□□□ -2.03
SNU114YKL173W YMR147WP40218 223 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W YJL107CP42947 387 aa2.39□□□□□ -2.03
SNU114YKL173W CAK1P43568 368 aaPredicted RBP2.39□□□□□ -2.03
SNU114YKL173W SMC3P47037 1230 aa2.39□□□□□ -2.03
SNU114YKL173W YNR068CP53754 272 aa2.39□□□□□ -2.03
SNU114YKL173W EFM6P53970 246 aa2.39□□□□□ -2.03
SNU114YKL173W YPR172WQ06608 200 aa2.39□□□□□ -2.03
SNU114YKL173W BAG7Q12128 409 aa2.39□□□□□ -2.03
SNU114YKL173W RRD2Q12461 358 aa2.39□□□□□ -2.03
SNU114YKL173W AVL9Q12500 764 aa2.39□□□□□ -2.03
SNU114YKL173W MYO4P32492 1471 aa2.39□□□□□ -2.03
SNU114YKL173W RPL7AP05737 244 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W CHO1P08456 276 aa2.39□□□□□ -2.03
SNU114YKL173W RNR3P21672 869 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W YJU2P28320 278 aaPredicted RBP2.39□□□□□ -2.03
SNU114YKL173W SPC110P32380 944 aa2.39□□□□□ -2.03
SNU114YKL173W KEL1P38853 1164 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W ELO1P39540 310 aa2.39□□□□□ -2.03
SNU114YKL173W CUL3P53202 744 aa2.39□□□□□ -2.03
SNU114YKL173W VTC3Q02725 835 aa2.39□□□□□ -2.03
SNU114YKL173W RPS10AQ08745 105 aaPredicted RBP2.39□□□□□ -2.03
SNU114YKL173W NCE102Q12207 173 aaRIP-Chip data2.39□□□□□ -2.03not detected
SNU114YKL173W RPL7BQ12213 244 aaKnown RBP2.39□□□□□ -2.03
SNU114YKL173W PGK1P00560 416 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W ADE5,7P07244 802 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W LPD1P09624 499 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W MDM10P18409 493 aa2.38□□□□□ -2.03
SNU114YKL173W RRP43P25359 394 aaPredicted RBP2.38□□□□□ -2.03
SNU114YKL173W SWC3P31376 625 aa2.38□□□□□ -2.03
SNU114YKL173W TFB1P32776 642 aa2.38□□□□□ -2.03
SNU114YKL173W GYP6P32806 458 aa2.38□□□□□ -2.03
SNU114YKL173W SNU114P36048 1008 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W ECM10P39987 644 aa2.38□□□□□ -2.03
SNU114YKL173W RPN11P43588 306 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W DLD2P46681 530 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W DRN1P53255 507 aaKnown RBP2.38□□□□□ -2.03
SNU114YKL173W COQ6P53318 479 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms