RNA–Protein interactions for RNA: YFR002W

NIC96, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NIC96, Length 2,520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIC96YFR002W TY3B-IQ7LHG5 1498 aaKnown RBP2.47□□□□□ -2.01
NIC96YFR002W MRS3P10566 314 aa2.47□□□□□ -2.01
NIC96YFR002W PDA1P16387 420 aaKnown RBP2.47□□□□□ -2.01
NIC96YFR002W MRP20P32387 263 aa2.47□□□□□ -2.01
NIC96YFR002W PSY4P38193 441 aa2.47□□□□□ -2.01
NIC96YFR002W UBA4P38820 440 aa2.47□□□□□ -2.01
NIC96YFR002W STR3P53101 465 aaKnown RBP2.47□□□□□ -2.01
NIC96YFR002W SOL4P53315 255 aa2.47□□□□□ -2.01
NIC96YFR002W GTR1Q00582 310 aa2.47□□□□□ -2.01
NIC96YFR002W INA17Q02888 182 aa2.47□□□□□ -2.01
NIC96YFR002W MHP1P43638 1398 aa2.47□□□□□ -2.01
NIC96YFR002W APC1P53886 1748 aa2.47□□□□□ -2.01
NIC96YFR002W YBR085C-AO43137 85 aa2.46□□□□□ -2.01
NIC96YFR002W PFK2P16862 959 aaKnown RBP RIP-Chip data2.46□□□□□ -2.01not detected
NIC96YFR002W MCM10P32354 571 aa2.46□□□□□ -2.01
NIC96YFR002W ERG1P32476 496 aaKnown RBP2.46□□□□□ -2.01
NIC96YFR002W CNS1P33313 385 aa2.46□□□□□ -2.01
NIC96YFR002W ANS1P38832 159 aa2.46□□□□□ -2.01
NIC96YFR002W KRE9P39005 276 aa2.46□□□□□ -2.01
NIC96YFR002W UIP3P39547 235 aa2.46□□□□□ -2.01
NIC96YFR002W RCO1Q04779 684 aa2.46□□□□□ -2.01
NIC96YFR002W NUS1Q12063 375 aa2.46□□□□□ -2.01
NIC96YFR002W LCB1P25045 558 aaKnown RBP2.46□□□□□ -2.02
NIC96YFR002W PHD1P36093 366 aa2.46□□□□□ -2.02
NIC96YFR002W UME6P39001 836 aa2.46□□□□□ -2.02
NIC96YFR002W DHH1P39517 506 aaKnown RBP2.46□□□□□ -2.02
NIC96YFR002W SLZ1P40167 298 aa2.46□□□□□ -2.02
NIC96YFR002W RPS10BP46784 105 aaKnown RBP2.46□□□□□ -2.02
NIC96YFR002W INN1P53901 409 aa2.46□□□□□ -2.02
NIC96YFR002W MUB1Q03162 620 aa2.46□□□□□ -2.02
NIC96YFR002W APL4Q12028 832 aa2.46□□□□□ -2.02
NIC96YFR002W ERP4Q12450 207 aa2.46□□□□□ -2.02
NIC96YFR002W YKL050CP35736 922 aa2.45□□□□□ -2.02
NIC96YFR002W MIC60P36112 540 aa2.45□□□□□ -2.02
NIC96YFR002W NDE1P40215 560 aa2.45□□□□□ -2.02
NIC96YFR002W IMP4P53941 290 aaKnown RBP2.45□□□□□ -2.02
NIC96YFR002W RTT109Q07794 436 aa2.45□□□□□ -2.02
NIC96YFR002W RPS10AQ08745 105 aaPredicted RBP2.45□□□□□ -2.02
NIC96YFR002W RDR1Q08904 546 aa2.45□□□□□ -2.02
NIC96YFR002W YDR056CQ12025 205 aa2.45□□□□□ -2.02
NIC96YFR002W RTP1Q12751 981 aa2.45□□□□□ -2.02
NIC96YFR002W SNF3P10870 884 aa2.45□□□□□ -2.02
NIC96YFR002W PRP16P15938 1071 aaPredicted RBP2.45□□□□□ -2.02
NIC96YFR002W MCM4P30665 933 aaKnown RBP2.45□□□□□ -2.02
NIC96YFR002W LOS1P33418 1100 aaPredicted RBP2.45□□□□□ -2.02
NIC96YFR002W ALY1P36117 915 aa2.45□□□□□ -2.02
NIC96YFR002W DIA4P38705 446 aaPredicted RBP2.45□□□□□ -2.02
NIC96YFR002W RTS1P38903 757 aa2.45□□□□□ -2.02
NIC96YFR002W AXL2P38928 823 aa2.45□□□□□ -2.02
NIC96YFR002W YER010CP40011 234 aa2.45□□□□□ -2.02
NIC96YFR002W DIM1P41819 318 aaKnown RBP2.45□□□□□ -2.02
NIC96YFR002W SSM4P40318 1319 aa2.45□□□□□ -2.02
NIC96YFR002W PSK1P31374 1356 aa2.44□□□□□ -2.02
NIC96YFR002W GFD2P25370 566 aaKnown RBP2.44□□□□□ -2.02
NIC96YFR002W RPS2P25443 254 aaKnown RBP2.44□□□□□ -2.02
NIC96YFR002W YOX1P34161 385 aa2.44□□□□□ -2.02
NIC96YFR002W PYK2P52489 506 aaKnown RBP2.44□□□□□ -2.02
NIC96YFR002W MEP3P53390 489 aa2.44□□□□□ -2.02
NIC96YFR002W SNO4Q04902 237 aa2.44□□□□□ -2.02
NIC96YFR002W SKG3Q06315 1026 aa2.44□□□□□ -2.02
NIC96YFR002W HSP33Q08914 237 aaKnown RBP2.44□□□□□ -2.02
NIC96YFR002W HSP32Q08992 237 aa2.44□□□□□ -2.02
NIC96YFR002W FOB1O13329 566 aa2.44□□□□□ -2.02
NIC96YFR002W ACH1P32316 526 aa2.44□□□□□ -2.02
NIC96YFR002W CBF2P32504 956 aa2.44□□□□□ -2.02
NIC96YFR002W TSC10P38342 320 aa2.44□□□□□ -2.02
NIC96YFR002W YJL068CP40363 299 aa2.44□□□□□ -2.02
NIC96YFR002W RPS7BP48164 190 aaKnown RBP2.44□□□□□ -2.02
NIC96YFR002W TDA7P53882 636 aaPredicted RBP2.44□□□□□ -2.02
NIC96YFR002W MSS11Q03825 758 aa2.44□□□□□ -2.02
NIC96YFR002W RBA50Q04418 439 aa2.44□□□□□ -2.02
NIC96YFR002W HCR1Q05775 265 aaKnown RBP2.44□□□□□ -2.02
NIC96YFR002W FMP45Q07651 309 aa2.44□□□□□ -2.02
NIC96YFR002W SNU66Q12420 587 aaPredicted RBP2.44□□□□□ -2.02
NIC96YFR002W INH1P01097 85 aa2.43□□□□□ -2.02
NIC96YFR002W PUT2P07275 575 aa2.43□□□□□ -2.02
NIC96YFR002W PWP1P21304 576 aaKnown RBP2.43□□□□□ -2.02
NIC96YFR002W CHS3P29465 1165 aa2.43□□□□□ -2.02
NIC96YFR002W IMP2'P32351 346 aa2.43□□□□□ -2.02
NIC96YFR002W PDB1P32473 366 aaKnown RBP2.43□□□□□ -2.02
NIC96YFR002W YNG2P38806 282 aaKnown RBP2.43□□□□□ -2.02
NIC96YFR002W NPR2P39923 615 aa2.43□□□□□ -2.02
NIC96YFR002W BUR6P40096 142 aa2.43□□□□□ -2.02
NIC96YFR002W ESL1P40456 1118 aa2.43□□□□□ -2.02
NIC96YFR002W SGM1P47166 707 aa2.43□□□□□ -2.02
NIC96YFR002W CDC31P06704 161 aaKnown RBP2.43□□□□□ -2.02
NIC96YFR002W ELO1P39540 310 aa2.43□□□□□ -2.02
NIC96YFR002W AAD10P47182 288 aa2.43□□□□□ -2.02
NIC96YFR002W YVH1Q02256 364 aaKnown RBP2.43□□□□□ -2.02
NIC96YFR002W EMI2Q04409 500 aaKnown RBP2.43□□□□□ -2.02
NIC96YFR002W SDH5Q08230 162 aa2.43□□□□□ -2.02
NIC96YFR002W MED1Q12321 566 aa2.43□□□□□ -2.02
NIC96YFR002W ARP6Q12509 438 aa2.43□□□□□ -2.02
NIC96YFR002W TYR1P20049 452 aa2.42□□□□□ -2.02
NIC96YFR002W SPE2P21182 396 aa2.42□□□□□ -2.02
NIC96YFR002W PRO3P32263 286 aaKnown RBP2.42□□□□□ -2.02
NIC96YFR002W SLC1P33333 303 aa2.42□□□□□ -2.02
NIC96YFR002W KTR3P38130 404 aaPredicted RBP2.42□□□□□ -2.02
NIC96YFR002W AXL1P40851 1208 aa2.42□□□□□ -2.02
NIC96YFR002W RPM2Q02773 1202 aa2.42□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 86.3 ms