RNA–Protein interactions for RNA: YFL040W

YFL040W, Transcript of Putative transporter, yeast

Gene YFL040W, Length 1,623 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YFL040W	YFL040W	STR3	P53101	465 aa	Known RBP	4.13	□□□□□ -1.75
YFL040W	YFL040W	STP1	Q00947	519 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	VTC3	Q02725	835 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	RIM20	Q12033	661 aa		4.13	□□□□□ -1.75
YFL040W	YFL040W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
YFL040W	YFL040W	APE1	P14904	514 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	EST1	P17214	699 aa	Predicted RBP	4.12	□□□□□ -1.75
YFL040W	YFL040W	STE50	P25344	346 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	YIH1	P25637	258 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	GCS1	P35197	352 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	YNG2	P38806	282 aa	Known RBP	4.12	□□□□□ -1.75
YFL040W	YFL040W	YGR066C	P53242	292 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	SWF1	Q04629	336 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	ERB1	Q04660	807 aa	Known RBP	4.12	□□□□□ -1.75
YFL040W	YFL040W	MRD1	Q06106	887 aa	Known RBP	4.12	□□□□□ -1.75
YFL040W	YFL040W	ISA2	Q12425	185 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	ISN1	Q99312	450 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	YRF1-4	O13559	1382 aa		4.12	□□□□□ -1.75
YFL040W	YFL040W	TY3B-G	Q99315	1547 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	RAP1	P11938	827 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	PMS1	P14242	873 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	SAC1	P32368	623 aa	Known RBP	4.11	□□□□□ -1.75
YFL040W	YFL040W	VPH1	P32563	840 aa	Known RBP	4.11	□□□□□ -1.75
YFL040W	YFL040W	AGP2	P38090	596 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	CST26	P38226	397 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	MUM2	P38236	366 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	VID24	P38263	362 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	BUR6	P40096	142 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	PKP1	P40530	394 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	BNI5	P53890	448 aa	Known RBP	4.11	□□□□□ -1.75
YFL040W	YFL040W	YNL144C	P53907	740 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	BUD22	Q04347	519 aa	Known RBP	4.11	□□□□□ -1.75
YFL040W	YFL040W	AIM32	Q04689	311 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	LUC7	Q07508	261 aa	Predicted RBP	4.11	□□□□□ -1.75
YFL040W	YFL040W	YOL159C	Q08300	171 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	ATG9	Q12142	997 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	YSP2	Q06681	1438 aa		4.11	□□□□□ -1.75
YFL040W	YFL040W	GAL80	P04387	435 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	YER190C-B	P0CX94	160 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	YEL077W-A	P0CX95	160 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	YGR296C-B	P0CX96	160 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	YPL283W-B	P0CX97	160 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	YPR204C-A	P0CX98	160 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	KGD1	P20967	1014 aa	Known RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	VMA16	P23968	213 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	TOA1	P32773	286 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	TIF3	P34167	436 aa	Known RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	TOM71	P38825	639 aa	Known RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	PET130	P47065	347 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	ASI1	P54074	624 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	VPS38	Q05919	439 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	INP53	Q12271	1107 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	YPR089W	O13585	888 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	TCD2	P36101	447 aa	Known RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	DIA4	P38705	446 aa	Predicted RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	AFG3	P39925	761 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	JEM1	P40358	645 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	IRC8	P47046	822 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	YPT11	P48559	417 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	IMD4	P50094	524 aa	Known RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	YGR016W	P53209	190 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	RPL15B	P54780	204 aa	Predicted RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	ARX1	Q03862	593 aa	Known RBP	4.1	□□□□□ -1.75
YFL040W	YFL040W	RTT109	Q07794	436 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	ATX2	Q12067	313 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	ATG29	Q12092	213 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	RLM1	Q12224	676 aa		4.1	□□□□□ -1.75
YFL040W	YFL040W	USO1	P25386	1790 aa		4.09	□□□□□ -1.75
YFL040W	YFL040W	MRP13	P12686	339 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	CLB3	P24870	427 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	WBP1	P33767	430 aa	Known RBP	4.09	□□□□□ -1.76
YFL040W	YFL040W	SNU114	P36048	1008 aa	Known RBP	4.09	□□□□□ -1.76
YFL040W	YFL040W	SCO2	P38072	301 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	UIP3	P39547	235 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	SMC3	P47037	1230 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	NNF2	P53253	936 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	YTP1	P53584	459 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	RPA49	Q01080	415 aa	Predicted RBP	4.09	□□□□□ -1.76
YFL040W	YFL040W	YDR239C	Q03780	787 aa		4.09	□□□□□ -1.76
YFL040W	YFL040W	MF(ALPHA)1	P01149	165 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	CLB1	P24868	471 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	CLB2	P24869	491 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	SYN8	P31377	255 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	PMT1	P33775	817 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	RXT2	P38255	430 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	YMR124W	P39523	943 aa	Known RBP	4.08	□□□□□ -1.76
YFL040W	YFL040W	SSU1	P41930	458 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	VPS25	P47142	202 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	DIA3	P52290	468 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	VID30	P53076	958 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	CAC2	Q04199	468 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	POS5	Q06892	414 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	FMP40	Q08968	688 aa	Predicted RBP	4.08	□□□□□ -1.76
YFL040W	YFL040W	AVL9	Q12500	764 aa		4.08	□□□□□ -1.76
YFL040W	YFL040W	KRS1	P15180	591 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	TPM1	P17536	199 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	AIM17	P23180	465 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	MNE1	P24720	663 aa		4.07	□□□□□ -1.76
YFL040W	YFL040W	URA7	P28274	579 aa	Known RBP	4.07	□□□□□ -1.76
YFL040W	YFL040W	MRE11	P32829	692 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms