RNA–Protein interactions for RNA: YEL047C

FRD1, Transcript of Soluble fumarate reductase, yeast

Gene FRD1, Length 1,413 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRD1	YEL047C	YPT35	P38815	214 aa	Known RBP	11.17	□□□□□ -0.62
FRD1	YEL047C	UTP9	P38882	575 aa	Known RBP	11.17	□□□□□ -0.62
FRD1	YEL047C	SHU2	P38957	223 aa		11.17	□□□□□ -0.62
FRD1	YEL047C	EMP65	P40085	556 aa		11.17	□□□□□ -0.62
FRD1	YEL047C	SEC27	P41811	889 aa	Known RBP	11.17	□□□□□ -0.62
FRD1	YEL047C	YJR149W	P47177	404 aa		11.17	□□□□□ -0.62
FRD1	YEL047C	TAF6	P53040	516 aa		11.17	□□□□□ -0.62
FRD1	YEL047C	GAS3	Q03655	524 aa		11.17	□□□□□ -0.62
FRD1	YEL047C	RAD34	Q06665	692 aa		11.17	□□□□□ -0.62
FRD1	YEL047C	MCD1	Q12158	566 aa		11.17	□□□□□ -0.62
FRD1	YEL047C	HSH49	Q99181	213 aa	Predicted RBP	11.17	□□□□□ -0.62
FRD1	YEL047C	RSR1	P13856	272 aa		11.16	□□□□□ -0.62
FRD1	YEL047C	SPT16	P32558	1035 aa	Known RBP	11.16	□□□□□ -0.62
FRD1	YEL047C	LOS1	P33418	1100 aa	Predicted RBP	11.16	□□□□□ -0.62
FRD1	YEL047C	SUL2	Q12325	893 aa		11.16	□□□□□ -0.62
FRD1	YEL047C	NOT5	Q12514	560 aa	Predicted RBP	11.16	□□□□□ -0.62
FRD1	YEL047C	STE3	P06783	470 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	SPT3	P06844	337 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	RNQ1	P25367	405 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	RPC19	P28000	142 aa	Known RBP	11.15	□□□□□ -0.62
FRD1	YEL047C	CRM1	P30822	1084 aa	Known RBP	11.15	□□□□□ -0.62
FRD1	YEL047C	SQT1	P35184	431 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	TRM7	P38238	310 aa	Known RBP	11.15	□□□□□ -0.62
FRD1	YEL047C	HSM3	P38348	480 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	GIC1	P38785	314 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	YJR030C	P47101	745 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	MRS2	Q01926	470 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	YML131W	Q03102	365 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	SHE9	Q04172	456 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	YOL019W	Q08157	551 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	GPB1	Q08886	897 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	RGT2	Q12300	763 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	AHA1	Q12449	350 aa	Known RBP	11.15	□□□□□ -0.62
FRD1	YEL047C	SRN2	Q99176	213 aa		11.15	□□□□□ -0.62
FRD1	YEL047C	RPL40A	P0CH08	128 aa	Known RBP	11.14	□□□□□ -0.63
FRD1	YEL047C	RPL40B	P0CH09	128 aa	Known RBP	11.14	□□□□□ -0.63
FRD1	YEL047C	ARG1	P22768	420 aa		11.14	□□□□□ -0.63
FRD1	YEL047C	MEI5	P32489	222 aa		11.14	□□□□□ -0.63
FRD1	YEL047C	PET309	P32522	965 aa	Predicted RBP	11.14	□□□□□ -0.63
FRD1	YEL047C	ARA1	P38115	344 aa		11.14	□□□□□ -0.63
FRD1	YEL047C	VPS41	P38959	992 aa		11.14	□□□□□ -0.63
FRD1	YEL047C	MDM34	P53083	459 aa		11.14	□□□□□ -0.63
FRD1	YEL047C	SLM2	P53955	656 aa		11.14	□□□□□ -0.63
FRD1	YEL047C	EGD1	Q02642	157 aa	Known RBP	11.14	□□□□□ -0.63
FRD1	YEL047C	YMR034C	Q05131	434 aa	Predicted RBP	11.14	□□□□□ -0.63
FRD1	YEL047C	RRP42	Q12277	265 aa	Predicted RBP	11.14	□□□□□ -0.63
FRD1	YEL047C	BAS1	P22035	811 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	OXP1	P28273	1286 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	NTR2	P36118	322 aa	Predicted RBP	11.13	□□□□□ -0.63
FRD1	YEL047C	PLB1	P39105	664 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	YER034W	P40022	185 aa	Known RBP	11.13	□□□□□ -0.63
FRD1	YEL047C	UBP6	P43593	499 aa	Known RBP	11.13	□□□□□ -0.63
FRD1	YEL047C	YPT32	P51996	222 aa	Known RBP	11.13	□□□□□ -0.63
FRD1	YEL047C	ERG26	P53199	349 aa	Known RBP	11.13	□□□□□ -0.63
FRD1	YEL047C	GTR2	P53290	341 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	BNA5	Q05979	453 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	ATG29	Q12092	213 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	YLR049C	Q12110	428 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	YPL245W	Q12179	454 aa	Known RBP	11.13	□□□□□ -0.63
FRD1	YEL047C	YPR011C	Q12251	326 aa		11.13	□□□□□ -0.63
FRD1	YEL047C	RPS4A	P0CX35	261 aa	Known RBP	11.12	□□□□□ -0.63
FRD1	YEL047C	RPS4B	P0CX36	261 aa	Known RBP	11.12	□□□□□ -0.63
FRD1	YEL047C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	11.12	□□□□□ -0.63	not detected
FRD1	YEL047C	LYS1	P38998	373 aa	RIP-Chip data	11.12	□□□□□ -0.63	not detected
FRD1	YEL047C	AZF1	P41696	914 aa		11.12	□□□□□ -0.63
FRD1	YEL047C	FKH2	P41813	862 aa		11.12	□□□□□ -0.63
FRD1	YEL047C	YGL176C	P46945	554 aa		11.12	□□□□□ -0.63
FRD1	YEL047C	ARE2	P53629	642 aa	Known RBP	11.12	□□□□□ -0.63
FRD1	YEL047C	YNL260C	P53846	198 aa		11.12	□□□□□ -0.63
FRD1	YEL047C	YPT6	Q99260	215 aa		11.12	□□□□□ -0.63
FRD1	YEL047C	NPP1	P25353	742 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	DOM34	P33309	386 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	RMA1	P36001	430 aa	Known RBP	11.11	□□□□□ -0.63
FRD1	YEL047C	NDE1	P40215	560 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	LRO1	P40345	661 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	FET5	P43561	622 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	MRM2	P53123	320 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	RHO3	Q00245	231 aa	Known RBP	11.11	□□□□□ -0.63
FRD1	YEL047C	EAF1	Q06337	982 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	BMT6	Q12291	365 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	YLR111W	Q12528	110 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	NHA1	Q99271	985 aa		11.11	□□□□□ -0.63
FRD1	YEL047C	MDM35	O60200	86 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	TRP3	P00937	484 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	COS2	P0CX12	379 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	COS3	P0CX13	379 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	KIN2	P13186	1147 aa	Known RBP	11.1	□□□□□ -0.63
FRD1	YEL047C	BUB2	P26448	306 aa	Predicted RBP	11.1	□□□□□ -0.63
FRD1	YEL047C	CWP1	P28319	239 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	HXT4	P32467	576 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	RPS1A	P33442	255 aa	Known RBP	11.1	□□□□□ -0.63
FRD1	YEL047C	CTP1	P38152	299 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	YHR033W	P38690	423 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	BZZ1	P38822	633 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	HXT6	P39003	570 aa	Known RBP	11.1	□□□□□ -0.63
FRD1	YEL047C	HXT7	P39004	570 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	ARB1	P40024	610 aa	Known RBP	11.1	□□□□□ -0.63
FRD1	YEL047C	SCS2	P40075	244 aa	Known RBP	11.1	□□□□□ -0.63
FRD1	YEL047C	GCD10	P41814	478 aa		11.1	□□□□□ -0.63
FRD1	YEL047C	COS4	P43542	379 aa		11.1	□□□□□ -0.63

Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms