RNA–Protein interactions for RNA: YBR030W

RKM3, Transcript of Ribosomal lysine methyltransferase, yeast

Gene RKM3, Length 1,659 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RKM3	YBR030W	COQ9	Q05779	260 aa		4.29	□□□□□ -1.72
RKM3	YBR030W	PCL8	Q08966	492 aa		4.29	□□□□□ -1.72
RKM3	YBR030W	UBX3	Q12229	455 aa		4.29	□□□□□ -1.72
RKM3	YBR030W	URA4	P20051	364 aa		4.28	□□□□□ -1.72
RKM3	YBR030W	NTC20	P38302	140 aa	Predicted RBP	4.28	□□□□□ -1.72
RKM3	YBR030W	IMD2	P38697	523 aa	Known RBP	4.28	□□□□□ -1.72
RKM3	YBR030W	PIH1	P38768	344 aa		4.28	□□□□□ -1.72
RKM3	YBR030W	COS5	P47187	383 aa		4.28	□□□□□ -1.72
RKM3	YBR030W	MNN10	P50108	393 aa	Known RBP	4.28	□□□□□ -1.72
RKM3	YBR030W	RPT4	P53549	437 aa	Known RBP	4.28	□□□□□ -1.72
RKM3	YBR030W	TIM11	P81449	96 aa	Predicted RBP	4.28	□□□□□ -1.72
RKM3	YBR030W	COS7	Q07788	383 aa		4.28	□□□□□ -1.72
RKM3	YBR030W	CDC45	Q08032	650 aa		4.28	□□□□□ -1.72
RKM3	YBR030W	RPL31B	P0C2H9	113 aa	Known RBP	4.27	□□□□□ -1.73
RKM3	YBR030W	ARO3	P14843	370 aa	Known RBP	4.27	□□□□□ -1.73
RKM3	YBR030W	SPO7	P18410	259 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	CLN1	P20437	546 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	DBP3	P20447	523 aa	Known RBP	4.27	□□□□□ -1.73
RKM3	YBR030W	BOS1	P25385	244 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	DAL80	P26343	269 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	SRB2	P34162	210 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	MLH1	P38920	769 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	YTA12	P40341	825 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	ASG1	P40467	964 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	OPT1	P40897	799 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	URB2	P47108	1174 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	HRD3	Q05787	833 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	PHO92	Q06390	306 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	TEN1	Q07921	160 aa		4.27	□□□□□ -1.73
RKM3	YBR030W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.27	□□□□□ -1.73
RKM3	YBR030W	YLR278C	Q05854	1341 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	ALG7	P07286	448 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	WHI2	P12611	486 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	KRS1	P15180	591 aa	Known RBP	4.26	□□□□□ -1.73
RKM3	YBR030W	OM45	P16547	393 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	CRM1	P30822	1084 aa	Known RBP	4.26	□□□□□ -1.73
RKM3	YBR030W	PFF1	P38244	976 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	ICS2	P38284	255 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	GDT1	P38301	280 aa	Predicted RBP	4.26	□□□□□ -1.73
RKM3	YBR030W	TSC10	P38342	320 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	VPS41	P38959	992 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	YDR089W	P38966	869 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	YIL089W	P40500	205 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	YJL107C	P42947	387 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	EPL1	P43572	832 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	PTR3	P43606	678 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	COQ6	P53318	479 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	ALF1	P53904	254 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	RNT1	Q02555	471 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	RBA50	Q04418	439 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	AEP3	Q12089	606 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	YDR061W	Q12298	539 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	CEX1	Q12453	761 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	PHO91	P27514	894 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	SSE1	P32589	693 aa	Known RBP	4.26	□□□□□ -1.73
RKM3	YBR030W	PXL1	P36166	706 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	MRPL4	P36517	319 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	PPS1	P38148	807 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	FAD1	P38913	306 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	ALK1	P43633	760 aa	Known RBP	4.26	□□□□□ -1.73
RKM3	YBR030W	AIM22	P47051	409 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	TOM22	P49334	152 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	YNL143C	P53908	130 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	AQR1	P53943	586 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	VTC3	Q02725	835 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	RPN9	Q04062	393 aa	Known RBP	4.26	□□□□□ -1.73
RKM3	YBR030W	YMR130W	Q04223	302 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	YMR111C	Q04461	462 aa	Predicted RBP	4.26	□□□□□ -1.73
RKM3	YBR030W	ZPS1	Q12512	249 aa		4.26	□□□□□ -1.73
RKM3	YBR030W	YMR084W	A2P2R3	262 aa		4.25	□□□□□ -1.73
RKM3	YBR030W	ARG81	P05085	880 aa		4.25	□□□□□ -1.73
RKM3	YBR030W	PPR1	P07272	904 aa	Predicted RBP	4.25	□□□□□ -1.73
RKM3	YBR030W	SPE2	P21182	396 aa		4.25	□□□□□ -1.73
RKM3	YBR030W	BUD5	P25300	642 aa	Predicted RBP	4.25	□□□□□ -1.73
RKM3	YBR030W	PTC6	P25646	442 aa		4.25	□□□□□ -1.73
RKM3	YBR030W	GMH1	P36125	273 aa		4.25	□□□□□ -1.73
RKM3	YBR030W	ZTA1	P38230	334 aa	Known RBP	4.25	□□□□□ -1.73
RKM3	YBR030W	SMX3	P54999	86 aa	Predicted RBP	4.25	□□□□□ -1.73
RKM3	YBR030W	WAR1	Q03631	944 aa		4.25	□□□□□ -1.73
RKM3	YBR030W	SLK19	Q08581	821 aa	Known RBP	4.25	□□□□□ -1.73
RKM3	YBR030W	LEA1	Q08963	238 aa	Predicted RBP	4.25	□□□□□ -1.73
RKM3	YBR030W	MRH1	Q12117	320 aa	Predicted RBP	4.25	□□□□□ -1.73
RKM3	YBR030W	NTO1	Q12311	748 aa		4.25	□□□□□ -1.73
RKM3	YBR030W	PMA1	P05030	918 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	CHO1	P08456	276 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	TAL1	P15019	335 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	GRR1	P24814	1151 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	FAA1	P30624	700 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	MRPL9	P31334	269 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	RPL32	P38061	130 aa	Known RBP	4.24	□□□□□ -1.73
RKM3	YBR030W	ARA1	P38115	344 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	CIN4	P39110	191 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	MIT1	P40002	666 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	ARG2	P40360	574 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	NDC80	P40460	691 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	ELP2	P42935	788 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	EFM3	P47163	339 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	TOF2	Q02208	771 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	ABZ2	Q03266	374 aa		4.24	□□□□□ -1.73
RKM3	YBR030W	DCS1	Q06151	350 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.9 ms