RNA–Protein interactions for RNA: snR45

snR45, Transcript of C/D box small nucleolar RNA (snoRNA) but not shown to be active, yeast

Gene snR45, Length 172 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR45	snR45	NNF2	P53253	936 aa		0.1	□□□□□ -2.39
snR45	snR45	TDA7	P53882	636 aa	Predicted RBP	0.1	□□□□□ -2.39
snR45	snR45	SWS2	P53937	143 aa		0.1	□□□□□ -2.39
snR45	snR45	ARK1	P53974	638 aa		0.1	□□□□□ -2.39
snR45	snR45	ALD6	P54115	500 aa	Known RBP	0.1	□□□□□ -2.39
snR45	snR45	SLG1	P54867	378 aa		0.1	□□□□□ -2.39
snR45	snR45	SMA1	Q02651	245 aa		0.1	□□□□□ -2.39
snR45	snR45	RMT2	Q03305	412 aa		0.1	□□□□□ -2.39
snR45	snR45	RCR2	Q03446	210 aa	Known RBP	0.1	□□□□□ -2.39
snR45	snR45	YMR160W	Q03823	816 aa		0.1	□□□□□ -2.39
snR45	snR45	YML096W	Q04489	525 aa		0.1	□□□□□ -2.39
snR45	snR45	NSE3	Q05541	303 aa		0.1	□□□□□ -2.39
snR45	snR45	VID22	Q05934	901 aa		0.1	□□□□□ -2.39
snR45	snR45	VIP1	Q06685	1146 aa	Known RBP	0.1	□□□□□ -2.39
snR45	snR45	POS5	Q06892	414 aa		0.1	□□□□□ -2.39
snR45	snR45	AAD4	Q07747	329 aa		0.1	□□□□□ -2.39
snR45	snR45	RTT109	Q07794	436 aa		0.1	□□□□□ -2.39
snR45	snR45	PSR2	Q07949	397 aa		0.1	□□□□□ -2.39
snR45	snR45	SSP2	Q08646	371 aa		0.1	□□□□□ -2.39
snR45	snR45	HUA2	Q12134	243 aa		0.1	□□□□□ -2.39
snR45	snR45	GLE1	Q12315	538 aa		0.1	□□□□□ -2.39
snR45	snR45	HSP42	Q12329	375 aa		0.1	□□□□□ -2.39
snR45	snR45	ERP3	Q12403	225 aa		0.1	□□□□□ -2.39
snR45	snR45	SKM1	Q12469	655 aa		0.1	□□□□□ -2.39
snR45	snR45	SEC39	Q12745	709 aa		0.1	□□□□□ -2.39
snR45	snR45	Q0297	Q9ZZV8	51 aa		0.1	□□□□□ -2.39
snR45	snR45	IKI3	Q06706	1349 aa	Known RBP	0.1	□□□□□ -2.39
snR45	snR45	SAL1	D6W196	494 aa		0.09	□□□□□ -2.4
snR45	snR45	RAD3	P06839	778 aa		0.09	□□□□□ -2.4
snR45	snR45	ATP1	P07251	545 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	MAS1	P10507	462 aa		0.09	□□□□□ -2.4
snR45	snR45	SAM1	P10659	382 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	SNF3	P10870	884 aa		0.09	□□□□□ -2.4
snR45	snR45	SPS100	P13130	326 aa		0.09	□□□□□ -2.4
snR45	snR45	CLC1	P17891	233 aa		0.09	□□□□□ -2.4
snR45	snR45	IME1	P21190	360 aa		0.09	□□□□□ -2.4
snR45	snR45	PDE1	P22434	369 aa		0.09	□□□□□ -2.4
snR45	snR45	TKL1	P23254	680 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	PPH22	P23595	377 aa		0.09	□□□□□ -2.4
snR45	snR45	LCB1	P25045	558 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	YCR006C	P25350	157 aa		0.09	□□□□□ -2.4
snR45	snR45	PGS1	P25578	521 aa		0.09	□□□□□ -2.4
snR45	snR45	CWP1	P28319	239 aa		0.09	□□□□□ -2.4
snR45	snR45	MSS51	P32335	436 aa		0.09	□□□□□ -2.4
snR45	snR45	HIR2	P32480	875 aa		0.09	□□□□□ -2.4
snR45	snR45	ECM25	P32525	599 aa		0.09	□□□□□ -2.4
snR45	snR45	BUD2	P33314	1104 aa		0.09	□□□□□ -2.4
snR45	snR45	LOS1	P33418	1100 aa	Predicted RBP	0.09	□□□□□ -2.4
snR45	snR45	TFC3	P34111	1160 aa		0.09	□□□□□ -2.4
snR45	snR45	TGL1	P34163	548 aa		0.09	□□□□□ -2.4
snR45	snR45	SHP1	P34223	423 aa		0.09	□□□□□ -2.4
snR45	snR45	MTR2	P34232	184 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	KKQ8	P36004	724 aa		0.09	□□□□□ -2.4
snR45	snR45	LHS1	P36016	881 aa		0.09	□□□□□ -2.4
snR45	snR45	HMT1	P38074	348 aa		0.09	□□□□□ -2.4
snR45	snR45	MAL32	P38158	584 aa		0.09	□□□□□ -2.4
snR45	snR45	REG2	P38232	338 aa		0.09	□□□□□ -2.4
snR45	snR45	PHO88	P38264	188 aa	Predicted RBP	0.09	□□□□□ -2.4
snR45	snR45	ICS2	P38284	255 aa		0.09	□□□□□ -2.4
snR45	snR45	PCM1	P38628	557 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	ECM14	P38836	430 aa		0.09	□□□□□ -2.4
snR45	snR45	TDA11	P38854	504 aa		0.09	□□□□□ -2.4
snR45	snR45	CRG1	P38892	291 aa	RIP-Chip data	0.09	□□□□□ -2.4	not detected
snR45	snR45	DSS1	P39112	969 aa		0.09	□□□□□ -2.4
snR45	snR45	RCY1	P39531	840 aa		0.09	□□□□□ -2.4
snR45	snR45	UBP12	P39538	1254 aa		0.09	□□□□□ -2.4
snR45	snR45	FUN12	P39730	1002 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	SAP1	P39955	897 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	TPA1	P40032	644 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	SER3	P40054	469 aa		0.09	□□□□□ -2.4
snR45	snR45	VFA1	P40080	203 aa		0.09	□□□□□ -2.4
snR45	snR45	OSW5	P40219	148 aa		0.09	□□□□□ -2.4
snR45	snR45	ESL1	P40456	1118 aa		0.09	□□□□□ -2.4
snR45	snR45	SEC24	P40482	926 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	PHB1	P40961	287 aa		0.09	□□□□□ -2.4
snR45	snR45	IES1	P43579	692 aa		0.09	□□□□□ -2.4
snR45	snR45	MPP10	P47083	593 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	BFA1	P47113	574 aa		0.09	□□□□□ -2.4
snR45	snR45	RPS7B	P48164	190 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	COQ5	P49017	307 aa		0.09	□□□□□ -2.4
snR45	snR45	NUP84	P52891	726 aa		0.09	□□□□□ -2.4
snR45	snR45	SNU71	P53207	620 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	MAL12	P53341	584 aa		0.09	□□□□□ -2.4
snR45	snR45	ZRG17	P53735	605 aa		0.09	□□□□□ -2.4
snR45	snR45	BSC5	P53755	489 aa		0.09	□□□□□ -2.4
snR45	snR45	ORC1	P54784	914 aa	Predicted RBP	0.09	□□□□□ -2.4
snR45	snR45	PEX25	Q02969	394 aa		0.09	□□□□□ -2.4
snR45	snR45	GIP3	Q03016	1276 aa		0.09	□□□□□ -2.4
snR45	snR45	VPS71	Q03433	280 aa		0.09	□□□□□ -2.4
snR45	snR45	TAF8	Q03750	510 aa		0.09	□□□□□ -2.4
snR45	snR45	TRM82	Q03774	444 aa		0.09	□□□□□ -2.4
snR45	snR45	YMR018W	Q04364	514 aa		0.09	□□□□□ -2.4
snR45	snR45	TMA64	Q04600	565 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	PIN3	Q06449	215 aa		0.09	□□□□□ -2.4
snR45	snR45	CSR1	Q06705	408 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	THI3	Q07471	609 aa		0.09	□□□□□ -2.4
snR45	snR45	YDL124W	Q07551	312 aa	Known RBP	0.09	□□□□□ -2.4
snR45	snR45	ALE1	Q08548	619 aa		0.09	□□□□□ -2.4
snR45	snR45	FLC1	Q08967	793 aa		0.09	□□□□□ -2.4
snR45	snR45	PLP2	Q12017	286 aa		0.09	□□□□□ -2.4

Retrieved 100 of 5,963 RNA–protein pairs in 59.9 ms